RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
SCAMP3-205ENST00000472397 BLOC1S1P78537 153 aa6.35□□□□□ -1.39
SCAMP3-205ENST00000472397 CCL20P78556 96 aa6.35□□□□□ -1.39
SCAMP3-205ENST00000472397 CLRN3Q8NCR9 226 aa6.35□□□□□ -1.39
SCAMP3-205ENST00000472397 MBD3L1Q8WWY6 194 aa6.35□□□□□ -1.39
SCAMP3-205ENST00000472397 M0QY20 66 aa6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 CIRBPQ14011 172 aaKnown RBP6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 IQCJQ1A5X6 159 aa6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 STPG4Q8N801 248 aa6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 C15orf56Q8N910 161 aa6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 C7orf33Q8WU49 177 aa6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 ANAPC16Q96DE5 110 aa6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 TMEM243Q9BU79 118 aa6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 NKX6-2Q9C056 277 aaPredicted RBP6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 VAX2Q9UIW0 290 aa6.34□□□□□ -1.39
SCAMP3-205ENST00000472397 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.33□□□□□ -1.4
SCAMP3-205ENST00000472397 GAS8-AS1O95177 125 aa6.33□□□□□ -1.4
SCAMP3-205ENST00000472397 PKIAP61925 76 aa6.33□□□□□ -1.4
SCAMP3-205ENST00000472397 TMEM97Q5BJF2 176 aa6.33□□□□□ -1.4
SCAMP3-205ENST00000472397 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
SCAMP3-205ENST00000472397 SSBP4Q9BWG4 385 aaPredicted RBP6.33□□□□□ -1.4
SCAMP3-205ENST00000472397 PLAC8Q9NZF1 115 aa6.33□□□□□ -1.4
SCAMP3-205ENST00000472397 A0A096LNI7 61 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 RAB19A4D1S5 217 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 UBE2L6O14933 153 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 IFNA1P01562 189 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 AMTP48728 403 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 RAB14P61106 215 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 PRR3P79522 188 aaKnown RBP6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 IFITM2Q01629 132 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 OR2D3Q8NGH3 330 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 LINC01600Q96MT4 127 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 MLST8Q9BVC4 326 aa6.32□□□□□ -1.4
SCAMP3-205ENST00000472397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.31□□□□□ -1.4
SCAMP3-205ENST00000472397 TRAV26-2A0A0B4J265 109 aa6.31□□□□□ -1.4
SCAMP3-205ENST00000472397 IGKV2-29A2NJV5 120 aaPredicted RBP6.31□□□□□ -1.4
SCAMP3-205ENST00000472397 OR5AL1P0C617 328 aa6.31□□□□□ -1.4
SCAMP3-205ENST00000472397 CEBPGP53567 150 aa6.31□□□□□ -1.4
SCAMP3-205ENST00000472397 WDR73Q6P4I2 378 aa6.31□□□□□ -1.4
SCAMP3-205ENST00000472397 FER1L6-AS1Q8NA97 138 aa6.31□□□□□ -1.4
SCAMP3-205ENST00000472397 RNF185Q96GF1 192 aa6.31□□□□□ -1.4
SCAMP3-205ENST00000472397 MANBALQ9NQG1 85 aa6.31□□□□□ -1.4
SCAMP3-205ENST00000472397 TRAV8-4A0A0B4J246 113 aa6.3□□□□□ -1.4
SCAMP3-205ENST00000472397 TRAV1-1A0A0B4J248 108 aa6.3□□□□□ -1.4
SCAMP3-205ENST00000472397 P01737 135 aa6.3□□□□□ -1.4
SCAMP3-205ENST00000472397 CXCL1P09341 107 aa6.3□□□□□ -1.4
SCAMP3-205ENST00000472397 RPL35P42766 123 aaKnown RBP6.3□□□□□ -1.4
SCAMP3-205ENST00000472397 RPS10P46783 165 aaKnown RBP6.3□□□□□ -1.4
SCAMP3-205ENST00000472397 RNASEKQ6P5S7 137 aaKnown RBP6.3□□□□□ -1.4
SCAMP3-205ENST00000472397 RASL11AQ6T310 242 aa6.3□□□□□ -1.4
SCAMP3-205ENST00000472397 EIF5A2Q9GZV4 153 aaKnown RBP6.3□□□□□ -1.4
SCAMP3-205ENST00000472397 LPAP08519 4548 aa6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 A0A0J9YXV3 536 aa6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 NDUFS6O75380 124 aaKnown RBP6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 IGLC6P0CF74 106 aa6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 BCL2P10415 239 aa6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 FOXA3P55318 350 aaPredicted RBP6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 CENPWQ5EE01 88 aa6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 LYZL1Q6UWQ5 148 aa6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 CHCHD10Q8WYQ3 142 aaPredicted RBP6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 MRPL18Q9H0U6 180 aaKnown RBP6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 TMA7Q9Y2S6 64 aaKnown RBP6.29□□□□□ -1.4
SCAMP3-205ENST00000472397 S100A9P06702 114 aaKnown RBP6.28□□□□□ -1.4
SCAMP3-205ENST00000472397 XCL1P47992 114 aa6.28□□□□□ -1.4
SCAMP3-205ENST00000472397 KRTAP10-8P60410 259 aa6.28□□□□□ -1.4
SCAMP3-205ENST00000472397 COTL1Q14019 142 aa6.28□□□□□ -1.4
SCAMP3-205ENST00000472397 AMMECR1LQ6DCA0 310 aa6.28□□□□□ -1.4
SCAMP3-205ENST00000472397 RPL39LQ96EH5 51 aaKnown RBP6.28□□□□□ -1.4
SCAMP3-205ENST00000472397 NIT2Q9NQR4 276 aa6.28□□□□□ -1.4
SCAMP3-205ENST00000472397 MED9Q9NWA0 146 aa6.28□□□□□ -1.4
SCAMP3-205ENST00000472397 A0A1B0GUV1 79 aa6.27□□□□□ -1.41
SCAMP3-205ENST00000472397 H7C1H1 209 aa6.27□□□□□ -1.41
SCAMP3-205ENST00000472397 NTF3P20783 257 aa6.27□□□□□ -1.41
SCAMP3-205ENST00000472397 CFAP161Q6P656 301 aa6.27□□□□□ -1.41
SCAMP3-205ENST00000472397 GATD1Q8NB37 220 aa6.27□□□□□ -1.41
SCAMP3-205ENST00000472397 FAM210AQ96ND0 272 aa6.27□□□□□ -1.41
SCAMP3-205ENST00000472397 TCEAL7Q9BRU2 100 aa6.27□□□□□ -1.41
SCAMP3-205ENST00000472397 CACNG7P62955 275 aa6.26□□□□□ -1.41
SCAMP3-205ENST00000472397 MEF2BQ02080 365 aaPredicted RBP6.26□□□□□ -1.41
SCAMP3-205ENST00000472397 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
SCAMP3-205ENST00000472397 TWIST1Q15672 202 aa6.26□□□□□ -1.41
SCAMP3-205ENST00000472397 CLLU1Q5K131 121 aa6.26□□□□□ -1.41
SCAMP3-205ENST00000472397 TAGLN2P37802 199 aaKnown RBP6.25□□□□□ -1.41
SCAMP3-205ENST00000472397 SRSF3P84103 164 aaKnown RBP6.25□□□□□ -1.41
SCAMP3-205ENST00000472397 FOXI1Q12951 378 aa6.25□□□□□ -1.41
SCAMP3-205ENST00000472397 REG3GQ6UW15 175 aa6.25□□□□□ -1.41
SCAMP3-205ENST00000472397 C19orf71A6NCJ1 209 aa6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 CCL25O15444 150 aa6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 PDE6DO43924 150 aa6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 SRP19P09132 144 aaKnown RBP6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 TRGC1P0CF51 173 aa6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 FGF6P10767 208 aa6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 RPS20P60866 119 aaKnown RBP6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 PEA15Q15121 130 aa6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 SPINK6Q6UWN8 80 aa6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 PGLYRP4Q96LB8 373 aa6.24□□□□□ -1.41
SCAMP3-205ENST00000472397 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
SCAMP3-205ENST00000472397 A0A1W2PNN7 141 aa6.23□□□□□ -1.41
SCAMP3-205ENST00000472397 GNG4P50150 75 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms