RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 KNCNA6PVL3 124 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 FABP5P3A8MUU1 101 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 M0R036 132 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 OXTP01178 125 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 INSP01308 110 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 MT-ND4LP03901 98 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 GPX1P07203 203 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 CD7P09564 240 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 ZNF705DP0CH99 300 aaPredicted RBP3.12□□□□□ -1.91
CCDC39-202ENST00000471307 ZNF705BP0CI00 300 aaPredicted RBP3.12□□□□□ -1.91
CCDC39-202ENST00000471307 MGST1P10620 155 aaKnown RBP3.12□□□□□ -1.91
CCDC39-202ENST00000471307 CRISP2P16562 243 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 DEFB1P60022 68 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 PRR3P79522 188 aaKnown RBP3.12□□□□□ -1.91
CCDC39-202ENST00000471307 CD164Q04900 197 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 RHEBQ15382 184 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 ADIRFQ15847 76 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 ORMDL2Q53FV1 153 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 SMUG1Q53HV7 270 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 GDF5OSQ5U4N7 250 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 FAM231DQ6ZW35 169 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 OR4B1Q8NGF8 309 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 FAM210BQ96KR6 192 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 OSTCQ9NRP0 149 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 TMEM242Q9NWH2 141 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 NBEAL1Q6ZS30 2694 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 MGAM2Q2M2H8 2515 aa3.12□□□□□ -1.91
CCDC39-202ENST00000471307 CMYA5Q8N3K9 4069 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 TRAV21A0A0B4J279 112 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 C7orf77A4D0Y5 90 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 C19orf71A6NCJ1 209 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 ORM1P02763 201 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 PFN1P07737 140 aaKnown RBP3.11□□□□□ -1.91
CCDC39-202ENST00000471307 CRIP1P50238 77 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 CTAG1AP78358 180 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 PDZD11Q5EBL8 140 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 IBA57Q5T440 356 aaKnown RBP3.11□□□□□ -1.91
CCDC39-202ENST00000471307 FAM162BQ5T6X4 162 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 Q6AWC8 147 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 MORN3Q6PF18 240 aaPredicted RBP3.11□□□□□ -1.91
CCDC39-202ENST00000471307 AMTNQ6UX39 209 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 DEFB125Q8N687 156 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 ZFAND2AQ8N6M9 145 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 Q8TAT8 98 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 ZC2HC1AQ96GY0 325 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 SFRP2Q96HF1 295 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 C20orf144Q9BQM9 153 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 NOTCH1P46531 2555 aa3.11□□□□□ -1.91
CCDC39-202ENST00000471307 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-202ENST00000471307 LOC102724200A0A096LPH7 203 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-202ENST00000471307 A0A0J9YXV3 536 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 C7orf71A4D174 169 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 TMEM189A5PLL7 270 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 A8MWL6 223 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 M0R2Z0 102 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 SH2D1AO60880 128 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 PRB4P10163 310 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-202ENST00000471307 RNASE4P34096 147 aaKnown RBP3.1□□□□□ -1.91
CCDC39-202ENST00000471307 UBE2AP49459 152 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 ZNF80P51504 273 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-202ENST00000471307 RPS20P60866 119 aaKnown RBP3.1□□□□□ -1.91
CCDC39-202ENST00000471307 CACNG7P62955 275 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 REG3AQ06141 175 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 SPINK13Q1W4C9 94 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 TTC32Q5I0X7 151 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 OR10J3Q5JRS4 329 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 KPRPQ5T749 579 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-202ENST00000471307 LINC00322Q6ZN03 302 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-202ENST00000471307 TMEM256Q8N2U0 113 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 KCNS1Q96KK3 526 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 IMMP2LQ96T52 175 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 TUBA4BQ9H853 241 aa3.1□□□□□ -1.91
CCDC39-202ENST00000471307 IGLV4-69A0A075B6H9 119 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 TRAV8-6A0A0B4J262 113 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 TRAV12-3A0A0B4J271 114 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 ZNF705GA8MUZ8 300 aaPredicted RBP3.09□□□□□ -1.91
CCDC39-202ENST00000471307 H7BYZ3 331 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 CXCL1P09341 107 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 FOXA3P55318 350 aaPredicted RBP3.09□□□□□ -1.91
CCDC39-202ENST00000471307 BTN1A1Q13410 526 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 TDRG1Q3Y452 100 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 DNLZQ5SXM8 178 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 OR2D3Q8NGH3 330 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 TSKUQ8WUA8 353 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 LINC00467Q9BRT7 94 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 RNASE7Q9H1E1 156 aaKnown RBP3.09□□□□□ -1.91
CCDC39-202ENST00000471307 WFDC10AQ9H1F0 79 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 RPP21Q9H633 154 aaKnown RBP3.09□□□□□ -1.91
CCDC39-202ENST00000471307 SMCO4Q9NRQ5 59 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 IL36BQ9NZH7 164 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 V9GYV3 84 aa3.09□□□□□ -1.91
CCDC39-202ENST00000471307 NBEAL2Q6ZNJ1 2754 aa3.09□□□□□ -1.92
CCDC39-202ENST00000471307 TRAV12-2A0A075B6T6 113 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 TRAV9-1A0A075B6T8 112 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 SMIM27A0A1W2PRY6 76 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 F2Z2F3 143 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 PSPHP1O15172 72 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 S100PP25815 95 aa3.08□□□□□ -1.92
CCDC39-202ENST00000471307 NMUP48645 174 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms