RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 UNQ9165/PRO28630Q6UXU0 137 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 CDKN2A-AS1Q9UH64 79 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 SMIM26A0A096LP01 95 aa5.18□□□□□ -1.58
BRCA1-210ENST00000471181 CTRLP40313 264 aa5.18□□□□□ -1.58
BRCA1-210ENST00000471181 PROK2Q9HC23 129 aa5.18□□□□□ -1.58
BRCA1-210ENST00000471181 IGFL3Q6UXB1 125 aa5.18□□□□□ -1.58
BRCA1-210ENST00000471181 NUPR2A6NF83 97 aa5.18□□□□□ -1.58
BRCA1-210ENST00000471181 ZNF843Q8N446 348 aa5.18□□□□□ -1.58
BRCA1-210ENST00000471181 RP1P56715 2156 aa5.18□□□□□ -1.58
BRCA1-210ENST00000471181 H7C423 109 aa5.18□□□□□ -1.58
BRCA1-210ENST00000471181 Q8N976 141 aa5.17□□□□□ -1.58
BRCA1-210ENST00000471181 NEXN-AS1Q8NBZ9 246 aa5.17□□□□□ -1.58
BRCA1-210ENST00000471181 TRAV10A0A0B4J240 114 aa5.17□□□□□ -1.58
BRCA1-210ENST00000471181 ATG2AQ2TAZ0 1938 aa5.17□□□□□ -1.58
BRCA1-210ENST00000471181 LST1O00453 97 aa5.17□□□□□ -1.58
BRCA1-210ENST00000471181 COX7CP15954 63 aa5.17□□□□□ -1.58
BRCA1-210ENST00000471181 LRRC75A-AS1Q8N1F1 130 aa5.17□□□□□ -1.58
BRCA1-210ENST00000471181 HEATR1Q9H583 2144 aaKnown RBP5.17□□□□□ -1.58
BRCA1-210ENST00000471181 COL4A4P53420 1690 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-210ENST00000471181 PATJQ8NI35 1801 aa5.17□□□□□ -1.58
BRCA1-210ENST00000471181 CNOT1A5YKK6 2376 aaKnown RBP5.17□□□□□ -1.58
BRCA1-210ENST00000471181 ALPK3Q96L96 1907 aa5.16□□□□□ -1.58
BRCA1-210ENST00000471181 CENPFP49454 3210 aa5.16□□□□□ -1.58
BRCA1-210ENST00000471181 RIF1Q5UIP0 2472 aaKnown RBP5.16□□□□□ -1.58
BRCA1-210ENST00000471181 IGLV4-69A0A075B6H9 119 aa5.16□□□□□ -1.58
BRCA1-210ENST00000471181 A8MZ25 164 aa5.16□□□□□ -1.58
BRCA1-210ENST00000471181 C19orf71A6NCJ1 209 aa5.16□□□□□ -1.58
BRCA1-210ENST00000471181 IGLV2-14P01704 120 aa5.16□□□□□ -1.58
BRCA1-210ENST00000471181 C17orf82Q86X59 251 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-210ENST00000471181 SPTBN5Q9NRC6 3674 aaKnown RBP5.16□□□□□ -1.58
BRCA1-210ENST00000471181 VPREB1P12018 145 aa5.16□□□□□ -1.58
BRCA1-210ENST00000471181 NCOR1O75376 2440 aa5.15□□□□□ -1.58
BRCA1-210ENST00000471181 TRBV6-8A0A0A6YYG3 113 aa5.15□□□□□ -1.58
BRCA1-210ENST00000471181 ZNF22P17026 224 aaPredicted RBP5.15□□□□□ -1.58
BRCA1-210ENST00000471181 BBC3Q96PG8 261 aaPredicted RBP5.15□□□□□ -1.58
BRCA1-210ENST00000471181 PTPRSQ13332 1948 aa5.15□□□□□ -1.58
BRCA1-210ENST00000471181 CRIP2P52943 208 aaPredicted RBP5.15□□□□□ -1.58
BRCA1-210ENST00000471181 TNRC18O15417 2968 aaPredicted RBP5.15□□□□□ -1.58
BRCA1-210ENST00000471181 SMIM9A6NGZ8 99 aa5.15□□□□□ -1.59
BRCA1-210ENST00000471181 FSHBP01225 129 aa5.15□□□□□ -1.59
BRCA1-210ENST00000471181 C7orf65Q6ZTY9 151 aa5.15□□□□□ -1.59
BRCA1-210ENST00000471181 FRMD6-AS1P0C7T7 363 aa5.15□□□□□ -1.59
BRCA1-210ENST00000471181 RPL28P46779 137 aaKnown RBP5.15□□□□□ -1.59
BRCA1-210ENST00000471181 IGLV4-3A0A075B6K6 122 aa5.15□□□□□ -1.59
BRCA1-210ENST00000471181 IGLV2-11P01706 119 aa5.15□□□□□ -1.59
BRCA1-210ENST00000471181 IGLV2-8P01709 118 aa5.15□□□□□ -1.59
BRCA1-210ENST00000471181 LINC01547P58512 204 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-210ENST00000471181 LINC00474Q9P2X8 69 aa5.15□□□□□ -1.59
BRCA1-210ENST00000471181 REV3LO60673 3130 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 TRBV30A0A0K0K1B3 111 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 TRBV7-7A0A0K0K1E9 115 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 PROK1P58294 105 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 SBSPONQ8IVN8 264 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 SMIM11BQ8TCY0 68 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 C1orf147Q96MC9 270 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-210ENST00000471181 CLUHP3Q96NS8 147 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 PYGO1Q9Y3Y4 419 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 PI4KAP42356 2102 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 LTBP2Q14767 1821 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 MRPS36P82909 103 aaKnown RBP5.14□□□□□ -1.59
BRCA1-210ENST00000471181 HEATR5AQ86XA9 2040 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 COL4A6Q14031 1691 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 INAFM1C9JVW0 142 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 H0Y9P7 68 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 C11orf53Q8IXP5 236 aa5.14□□□□□ -1.59
BRCA1-210ENST00000471181 CACNA1BQ00975 2339 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 FAM167A-AS1Q96KT0 104 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 PLA2G2EQ9NZK7 142 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 CACNA1DQ01668 2161 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 DEFB116Q30KQ4 102 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 SPAG11AQ6PDA7 123 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 TP73-AS1Q9UF72 201 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 IGLV5-52A0A0A0MRZ9 124 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 ZNF80P51504 273 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-210ENST00000471181 TANC1Q9C0D5 1861 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 INTS1Q8N201 2190 aaKnown RBP5.13□□□□□ -1.59
BRCA1-210ENST00000471181 LINC01548A6NM66 108 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 LINC00337Q8N6G1 96 aa5.13□□□□□ -1.59
BRCA1-210ENST00000471181 FAM186AA6NE01 2351 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 CEP250Q9BV73 2442 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 DAZAP2Q15038 168 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-210ENST00000471181 KPRPQ5T749 579 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-210ENST00000471181 THADAQ6YHU6 1953 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 SCN5AQ14524 2016 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 DOCK11Q5JSL3 2073 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 TNFRSF13BO14836 293 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-210ENST00000471181 RNASE3P12724 160 aaKnown RBP5.12□□□□□ -1.59
BRCA1-210ENST00000471181 Q8N7P7 452 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 MAPKAPK5-AS1Q8N8E1 139 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 ANK1P16157 1881 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 Q6JHZ5 121 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 REG3GQ6UW15 175 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 DOCK6Q96HP0 2047 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 FER1L5A0AVI2 2057 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 IGKV2D-30A0A075B6S6 120 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 IGKV2-30P06310 120 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 TRAV7A0A075B6U4 112 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 C1orf137Q5JT78 98 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 Q6ZSR3 168 aa5.12□□□□□ -1.59
BRCA1-210ENST00000471181 LINC01556Q5JQF7 62 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms