RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 ANKHD1Q8IWZ3 2542 aaKnown RBP8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 ZNF462Q96JM2 2506 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 TRAV41A0A0B4J266 112 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 TRBV30A0A0K0K1B3 111 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 KLLNB2CW77 178 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 ZFP36P26651 326 aaKnown RBP8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 C5orf56Q8N8D9 126 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 JPT2Q9H910 190 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 COX7CP15954 63 aa8.44□□□□□ -1.06
SRGAP3-204ENST00000470951 SAA4P35542 130 aa8.44□□□□□ -1.06
SRGAP3-204ENST00000470951 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
SRGAP3-204ENST00000470951 OXTP01178 125 aa8.43□□□□□ -1.06
SRGAP3-204ENST00000470951 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
SRGAP3-204ENST00000470951 MUSTN1Q8IVN3 82 aa8.43□□□□□ -1.06
SRGAP3-204ENST00000470951 TMEM86BQ8N661 226 aa8.43□□□□□ -1.06
SRGAP3-204ENST00000470951 NTN5Q8WTR8 489 aaPredicted RBP8.43□□□□□ -1.06
SRGAP3-204ENST00000470951 F5H697 171 aa8.42□□□□□ -1.06
SRGAP3-204ENST00000470951 TNP2Q05952 138 aa8.42□□□□□ -1.06
SRGAP3-204ENST00000470951 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
SRGAP3-204ENST00000470951 Q1RN00 199 aa8.42□□□□□ -1.06
SRGAP3-204ENST00000470951 MOB4Q9Y3A3 225 aa8.42□□□□□ -1.06
SRGAP3-204ENST00000470951 TRGV11A0A075B6L2 103 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 H3BUA1 57 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 UNQ9165/PRO28630Q6UXU0 137 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 USMG5Q96IX5 58 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 C2orf48Q96LS8 159 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 H3BMM0 161 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 H3BT86 120 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 RPL35AP18077 110 aaKnown RBP8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 ZNF415Q09FC8 603 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 ZNF843Q8N446 348 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 UBE2WQ96B02 151 aa8.41□□□□□ -1.06
SRGAP3-204ENST00000470951 ADGRG4Q8IZF6 3080 aa8.4□□□□□ -1.06
SRGAP3-204ENST00000470951 C20orf203Q8NBC4 194 aa8.4□□□□□ -1.06
SRGAP3-204ENST00000470951 F6UB75 175 aa8.4□□□□□ -1.07
SRGAP3-204ENST00000470951 DEFB121Q5J5C9 76 aa8.4□□□□□ -1.07
SRGAP3-204ENST00000470951 C9orf85Q96MD7 179 aa8.4□□□□□ -1.07
SRGAP3-204ENST00000470951 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.07
SRGAP3-204ENST00000470951 TACC2O95359 2948 aa8.4□□□□□ -1.07
SRGAP3-204ENST00000470951 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
SRGAP3-204ENST00000470951 H7C2G1 150 aa8.39□□□□□ -1.07
SRGAP3-204ENST00000470951 M0QY20 66 aa8.39□□□□□ -1.07
SRGAP3-204ENST00000470951 COX6CP09669 75 aa8.39□□□□□ -1.07
SRGAP3-204ENST00000470951 DEFB1P60022 68 aa8.39□□□□□ -1.07
SRGAP3-204ENST00000470951 MYO18BQ8IUG5 2567 aa8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 TRACP01848 142 aa8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 ZNF256Q9Y2P7 627 aaPredicted RBP8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 HIVEP3Q5T1R4 2406 aa8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 I3L3M4 83 aa8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 TRIAP1O43715 76 aa8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 CEMP1Q6PRD7 247 aaPredicted RBP8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 C2orf82Q6UX34 121 aa8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 RHPN1-AS1Q9BWJ2 59 aa8.38□□□□□ -1.07
SRGAP3-204ENST00000470951 COL12A1Q99715 3063 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 IGHV4-39P01824 125 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 ZNF56Q15929 161 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 FLNCQ14315 2725 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 IGHV3-16A0A0C4DH30 117 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 TRBV12-3P01733 135 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 ELANEP08246 267 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 IGHV3-30-3P0DP02 117 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 LITAFQ99732 161 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 DAZ1Q9NQZ3 744 aaKnown RBP8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 ICOSQ9Y6W8 199 aa8.37□□□□□ -1.07
SRGAP3-204ENST00000470951 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
SRGAP3-204ENST00000470951 LINC00336Q6ZUF6 198 aa8.36□□□□□ -1.07
SRGAP3-204ENST00000470951 LINC00527Q9UJ94 153 aa8.36□□□□□ -1.07
SRGAP3-204ENST00000470951 PRRC2AP48634 2157 aaKnown RBP8.36□□□□□ -1.07
SRGAP3-204ENST00000470951 K7EMT4 169 aa8.36□□□□□ -1.07
SRGAP3-204ENST00000470951 FAM74A4Q5TZK3 123 aa8.36□□□□□ -1.07
SRGAP3-204ENST00000470951 OPRPNQ99935 248 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-204ENST00000470951 H7C423 109 aa8.35□□□□□ -1.07
SRGAP3-204ENST00000470951 CCL21O00585 134 aa8.35□□□□□ -1.07
SRGAP3-204ENST00000470951 MRPS36P82909 103 aaKnown RBP8.35□□□□□ -1.07
SRGAP3-204ENST00000470951 TRAV12-3A0A0B4J271 114 aa8.35□□□□□ -1.07
SRGAP3-204ENST00000470951 GNLYP22749 145 aa8.35□□□□□ -1.07
SRGAP3-204ENST00000470951 CXCL5P42830 114 aa8.35□□□□□ -1.07
SRGAP3-204ENST00000470951 HIST1H4AP62805 103 aaKnown RBP8.35□□□□□ -1.07
SRGAP3-204ENST00000470951 DEFB104AQ8WTQ1 72 aa8.35□□□□□ -1.07
SRGAP3-204ENST00000470951 IGHV3-64A0A075B6Q5 118 aa8.34□□□□□ -1.07
SRGAP3-204ENST00000470951 IGHV1-58A0A0C4DH39 117 aa8.34□□□□□ -1.07
SRGAP3-204ENST00000470951 MIAQ16674 131 aa8.34□□□□□ -1.07
SRGAP3-204ENST00000470951 LST1O00453 97 aa8.34□□□□□ -1.08
SRGAP3-204ENST00000470951 ACYP1P07311 99 aa8.34□□□□□ -1.08
SRGAP3-204ENST00000470951 PFN2P35080 140 aa8.34□□□□□ -1.08
SRGAP3-204ENST00000470951 LMO4P61968 165 aa8.34□□□□□ -1.08
SRGAP3-204ENST00000470951 DCANP1Q8TF63 244 aa8.34□□□□□ -1.08
SRGAP3-204ENST00000470951 SPTBN1Q01082 2364 aaKnown RBP8.33□□□□□ -1.08
SRGAP3-204ENST00000470951 TIMM17BO60830 172 aa8.33□□□□□ -1.08
SRGAP3-204ENST00000470951 IGHG2P01859 326 aa8.33□□□□□ -1.08
SRGAP3-204ENST00000470951 MED13LQ71F56 2210 aa8.33□□□□□ -1.08
SRGAP3-204ENST00000470951 IGKV3-7A0A075B6H7 116 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 hADV29S1A0JD25 119 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 EPM2AB3EWF7 344 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 PRSS2P07478 247 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 NDUFA12Q9UI09 145 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms