RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 FAM104AQ969W3 186 aa9.66□□□□□ -0.86
SFXN3-205ENST00000470252 LITAFQ99732 161 aa9.66□□□□□ -0.86
SFXN3-205ENST00000470252 TRBV30A0A0K0K1B3 111 aa9.65□□□□□ -0.86
SFXN3-205ENST00000470252 AVPP01185 164 aa9.65□□□□□ -0.86
SFXN3-205ENST00000470252 MRPS36P82909 103 aaKnown RBP9.65□□□□□ -0.86
SFXN3-205ENST00000470252 CITED1Q99966 193 aa9.65□□□□□ -0.86
SFXN3-205ENST00000470252 PYGO1Q9Y3Y4 419 aa9.65□□□□□ -0.86
SFXN3-205ENST00000470252 CSPG4Q6UVK1 2322 aa9.65□□□□□ -0.86
SFXN3-205ENST00000470252 DUX5Q96PT3 197 aa9.65□□□□□ -0.86
SFXN3-205ENST00000470252 ZNF462Q96JM2 2506 aa9.65□□□□□ -0.86
SFXN3-205ENST00000470252 CRYBG3Q68DQ2 2970 aa9.65□□□□□ -0.87
SFXN3-205ENST00000470252 TEX49A0A1B0GTD5 131 aa9.64□□□□□ -0.87
SFXN3-205ENST00000470252 ADAMTSL4-AS1Q5T5F5 129 aa9.64□□□□□ -0.87
SFXN3-205ENST00000470252 NDUFA12Q9UI09 145 aa9.64□□□□□ -0.87
SFXN3-205ENST00000470252 IGHV1-58A0A0C4DH39 117 aa9.64□□□□□ -0.87
SFXN3-205ENST00000470252 TRBV10-2A0A0K0K1G8 114 aa9.64□□□□□ -0.87
SFXN3-205ENST00000470252 RBMY1A1P0DJD3 496 aaKnown RBP9.64□□□□□ -0.87
SFXN3-205ENST00000470252 RBMY1CP0DJD4 496 aa9.64□□□□□ -0.87
SFXN3-205ENST00000470252 GNLYP22749 145 aa9.64□□□□□ -0.87
SFXN3-205ENST00000470252 ATP5J2P56134 94 aa9.64□□□□□ -0.87
SFXN3-205ENST00000470252 NPC2P61916 151 aa9.64□□□□□ -0.87
SFXN3-205ENST00000470252 RBMY1FQ15415 496 aaKnown RBP9.64□□□□□ -0.87
SFXN3-205ENST00000470252 KNCNA6PVL3 124 aa9.63□□□□□ -0.87
SFXN3-205ENST00000470252 SNCGO76070 127 aa9.63□□□□□ -0.87
SFXN3-205ENST00000470252 IGHV4-59P01825 116 aa9.63□□□□□ -0.87
SFXN3-205ENST00000470252 SMIM20Q8N5G0 67 aa9.63□□□□□ -0.87
SFXN3-205ENST00000470252 ICOSQ9Y6W8 199 aa9.63□□□□□ -0.87
SFXN3-205ENST00000470252 A8MZ25 164 aa9.63□□□□□ -0.87
SFXN3-205ENST00000470252 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
SFXN3-205ENST00000470252 SPANXDQ9BXN6 97 aa9.62□□□□□ -0.87
SFXN3-205ENST00000470252 SPANXCQ9NY87 97 aa9.62□□□□□ -0.87
SFXN3-205ENST00000470252 TRAV8-4A0A0B4J246 113 aa9.62□□□□□ -0.87
SFXN3-205ENST00000470252 PRM2P04554 102 aa9.62□□□□□ -0.87
SFXN3-205ENST00000470252 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
SFXN3-205ENST00000470252 GAGE2EQ4V326 116 aa9.62□□□□□ -0.87
SFXN3-205ENST00000470252 Q6ZSV7 163 aa9.62□□□□□ -0.87
SFXN3-205ENST00000470252 GAGE2DQ9UEU5 116 aa9.62□□□□□ -0.87
SFXN3-205ENST00000470252 Q9UF83 564 aa9.62□□□□□ -0.87
SFXN3-205ENST00000470252 MAP1AP78559 2803 aaPredicted RBP9.62□□□□□ -0.87
SFXN3-205ENST00000470252 TRAV4A0A0B4J268 109 aa9.61□□□□□ -0.87
SFXN3-205ENST00000470252 H3BMM0 161 aa9.61□□□□□ -0.87
SFXN3-205ENST00000470252 CRLF1O75462 422 aa9.61□□□□□ -0.87
SFXN3-205ENST00000470252 NHLRC4P0CG21 123 aaPredicted RBP9.61□□□□□ -0.87
SFXN3-205ENST00000470252 RPL13AP40429 203 aaKnown RBP9.61□□□□□ -0.87
SFXN3-205ENST00000470252 C2orf82Q6UX34 121 aa9.61□□□□□ -0.87
SFXN3-205ENST00000470252 UBE2WQ96B02 151 aa9.61□□□□□ -0.87
SFXN3-205ENST00000470252 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
SFXN3-205ENST00000470252 EDA2RQ9HAV5 297 aa9.61□□□□□ -0.87
SFXN3-205ENST00000470252 MIAQ16674 131 aa9.61□□□□□ -0.87
SFXN3-205ENST00000470252 DEFB112Q30KQ8 113 aa9.61□□□□□ -0.87
SFXN3-205ENST00000470252 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.6□□□□□ -0.87
SFXN3-205ENST00000470252 IGKV2-29A2NJV5 120 aaPredicted RBP9.6□□□□□ -0.87
SFXN3-205ENST00000470252 GAGE12JA6NER3 117 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 H7C423 109 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 GAGE7O76087 117 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 COX6CP09669 75 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 GAGE12FP0CL80 117 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 GAGE12GP0CL81 117 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 GAGE12IP0CL82 117 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 GAGE4Q13068 117 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 DUX3Q96PT4 197 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 CHCHD7Q9BUK0 85 aa9.6□□□□□ -0.87
SFXN3-205ENST00000470252 B4DSR2 109 aa9.59□□□□□ -0.87
SFXN3-205ENST00000470252 HOXD3P31249 432 aaPredicted RBP9.59□□□□□ -0.87
SFXN3-205ENST00000470252 Q6ZSN1 163 aa9.59□□□□□ -0.87
SFXN3-205ENST00000470252 RNF152Q8N8N0 203 aa9.59□□□□□ -0.87
SFXN3-205ENST00000470252 CLEC2BQ92478 149 aa9.59□□□□□ -0.87
SFXN3-205ENST00000470252 UBE2D4Q9Y2X8 147 aa9.59□□□□□ -0.87
SFXN3-205ENST00000470252 SPG11Q96JI7 2443 aa9.59□□□□□ -0.87
SFXN3-205ENST00000470252 PLA2G2AP14555 144 aa9.59□□□□□ -0.87
SFXN3-205ENST00000470252 TMEM89A2RUT3 159 aa9.58□□□□□ -0.88
SFXN3-205ENST00000470252 DEFB131AP59861 70 aa9.58□□□□□ -0.88
SFXN3-205ENST00000470252 IGHV3-38A0A0C4DH36 116 aa9.57□□□□□ -0.88
SFXN3-205ENST00000470252 NDUFV3P56181 108 aaKnown RBP9.57□□□□□ -0.88
SFXN3-205ENST00000470252 DAND5Q8N907 189 aa9.57□□□□□ -0.88
SFXN3-205ENST00000470252 C15orf53Q8NAA6 179 aa9.57□□□□□ -0.88
SFXN3-205ENST00000470252 LINC00467Q9BRT7 94 aa9.57□□□□□ -0.88
SFXN3-205ENST00000470252 YAE1D1Q9NRH1 226 aa9.57□□□□□ -0.88
SFXN3-205ENST00000470252 TMEM61Q8N0U2 210 aa9.57□□□□□ -0.88
SFXN3-205ENST00000470252 CELSR2Q9HCU4 2923 aa9.57□□□□□ -0.88
SFXN3-205ENST00000470252 H3BT86 120 aa9.56□□□□□ -0.88
SFXN3-205ENST00000470252 J3QKU1 62 aa9.56□□□□□ -0.88
SFXN3-205ENST00000470252 TTC32Q5I0X7 151 aa9.56□□□□□ -0.88
SFXN3-205ENST00000470252 RBMY1BA6NDE4 496 aaKnown RBP9.56□□□□□ -0.88
SFXN3-205ENST00000470252 RBMY1EA6NEQ0 496 aaKnown RBP9.56□□□□□ -0.88
SFXN3-205ENST00000470252 RBMY1DP0C7P1 496 aaKnown RBP9.56□□□□□ -0.88
SFXN3-205ENST00000470252 ZNF415Q09FC8 603 aa9.56□□□□□ -0.88
SFXN3-205ENST00000470252 FASNP49327 2511 aaKnown RBP9.56□□□□□ -0.88
SFXN3-205ENST00000470252 CDKN2A-AS1Q9UH64 79 aa9.55□□□□□ -0.88
SFXN3-205ENST00000470252 LST1O00453 97 aa9.55□□□□□ -0.88
SFXN3-205ENST00000470252 IFITM1P13164 125 aa9.55□□□□□ -0.88
SFXN3-205ENST00000470252 TIMM17BO60830 172 aa9.54□□□□□ -0.88
SFXN3-205ENST00000470252 SLURP1P55000 103 aa9.54□□□□□ -0.88
SFXN3-205ENST00000470252 DEFB136Q30KP8 78 aa9.54□□□□□ -0.88
SFXN3-205ENST00000470252 Q6Q795 121 aa9.54□□□□□ -0.88
SFXN3-205ENST00000470252 CCDC179H3BU77 68 aa9.53□□□□□ -0.88
SFXN3-205ENST00000470252 TMEM101Q96IK0 257 aa9.53□□□□□ -0.88
SFXN3-205ENST00000470252 UBE2E2Q96LR5 201 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms