RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 SMDT1Q9H4I9 107 aa5.97□□□□□ -1.45
SHROOM3-203ENST00000469923 XKRY2A2RUG3 117 aa5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 USP17L23D6RBM5 183 aa5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 F2Z2F3 143 aa5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 F8W036 122 aa5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 ADCYAP1P18509 176 aa5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 HNRNPA3P51991 378 aaKnown RBP5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 TWIST1Q15672 202 aa5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 FAM231DQ6ZW35 169 aa5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 LINC01551Q86U37 167 aa5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 PGLYRP4Q96LB8 373 aa5.96□□□□□ -1.46
SHROOM3-203ENST00000469923 WDR73Q6P4I2 378 aa5.95□□□□□ -1.46
SHROOM3-203ENST00000469923 LINC00528Q8N1L1 170 aa5.95□□□□□ -1.46
SHROOM3-203ENST00000469923 CIRBP-AS1Q8TBR5 109 aa5.95□□□□□ -1.46
SHROOM3-203ENST00000469923 FRZBQ92765 325 aa5.95□□□□□ -1.46
SHROOM3-203ENST00000469923 AP1S3Q96PC3 154 aa5.95□□□□□ -1.46
SHROOM3-203ENST00000469923 TMEM70Q9BUB7 260 aa5.95□□□□□ -1.46
SHROOM3-203ENST00000469923 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
SHROOM3-203ENST00000469923 URGCP-MRPS24S4R325 110 aa5.95□□□□□ -1.46
SHROOM3-203ENST00000469923 FAM231BA6NCW3 169 aa5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 NDUFS6O75380 124 aaKnown RBP5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 APOC3P02656 99 aa5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 CTRLP40313 264 aa5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 RPL23P62829 140 aaKnown RBP5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 TMEM241Q24JQ0 296 aa5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 SEC11CQ9BY50 192 aa5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 DPH3P1Q9H4G8 78 aa5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 PRR34Q9NV39 138 aa5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 CARHSP1Q9Y2V2 147 aaKnown RBP5.94□□□□□ -1.46
SHROOM3-203ENST00000469923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 IGKV3OR2-268A0A0C4DH90 116 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 IGKV2-29A2NJV5 120 aaPredicted RBP5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 A8MWL6 223 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 SMKR1H3BMG3 65 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 HLA-DQA1P01909 254 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 TRGC1P0CF51 173 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 IQCJQ1A5X6 159 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 C10orf91Q5T1B1 145 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 RASL11AQ6T310 242 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 CNFNQ9BYD5 112 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 OSTCQ9NRP0 149 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 V9GYV3 84 aa5.93□□□□□ -1.46
SHROOM3-203ENST00000469923 FAM229AH3BQW9 127 aa5.92□□□□□ -1.46
SHROOM3-203ENST00000469923 CHTF8P0CG12 524 aa5.92□□□□□ -1.46
SHROOM3-203ENST00000469923 RPS10P46783 165 aaKnown RBP5.92□□□□□ -1.46
SHROOM3-203ENST00000469923 ISOC2Q96AB3 205 aa5.92□□□□□ -1.46
SHROOM3-203ENST00000469923 RNF185Q96GF1 192 aa5.92□□□□□ -1.46
SHROOM3-203ENST00000469923 CHAC1Q9BUX1 264 aa5.92□□□□□ -1.46
SHROOM3-203ENST00000469923 C1orf43Q9BWL3 253 aa5.92□□□□□ -1.46
SHROOM3-203ENST00000469923 NIT2Q9NQR4 276 aa5.92□□□□□ -1.46
SHROOM3-203ENST00000469923 TRBV25-1A0A075B6N4 114 aa5.91□□□□□ -1.46
SHROOM3-203ENST00000469923 IGHV1-24A0A0C4DH33 117 aa5.91□□□□□ -1.46
SHROOM3-203ENST00000469923 HIGD1CA8MV81 97 aa5.91□□□□□ -1.46
SHROOM3-203ENST00000469923 REG3AQ06141 175 aa5.91□□□□□ -1.46
SHROOM3-203ENST00000469923 ADIRFQ15847 76 aa5.91□□□□□ -1.46
SHROOM3-203ENST00000469923 FAM74A3Q4VXF1 159 aa5.91□□□□□ -1.46
SHROOM3-203ENST00000469923 SDIM1Q6ZPB5 146 aa5.91□□□□□ -1.46
SHROOM3-203ENST00000469923 TSKUQ8WUA8 353 aa5.91□□□□□ -1.46
SHROOM3-203ENST00000469923 LINC00526Q96FQ7 95 aa5.91□□□□□ -1.46
SHROOM3-203ENST00000469923 GAGE12HA6NDE8 117 aa5.9□□□□□ -1.46
SHROOM3-203ENST00000469923 ELOBQ15370 118 aa5.9□□□□□ -1.46
SHROOM3-203ENST00000469923 CT83Q5H943 113 aa5.9□□□□□ -1.46
SHROOM3-203ENST00000469923 SVBPQ8N300 66 aa5.9□□□□□ -1.46
SHROOM3-203ENST00000469923 NUP35Q8NFH5 326 aa5.9□□□□□ -1.46
SHROOM3-203ENST00000469923 RMI2Q96E14 147 aa5.9□□□□□ -1.46
SHROOM3-203ENST00000469923 TMEM243Q9BU79 118 aa5.9□□□□□ -1.46
SHROOM3-203ENST00000469923 CHCHD7Q9BUK0 85 aa5.9□□□□□ -1.46
SHROOM3-203ENST00000469923 NAT8Q9UHE5 227 aa5.9□□□□□ -1.46
SHROOM3-203ENST00000469923 A0A1B0GUT8 65 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 H7C1H1 209 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 SNAPINO95295 136 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 NCR2O95944 276 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 CRPP02741 224 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 RAB4AP20338 218 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 Q0VG73 95 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 ODF1Q14990 250 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 KCNIP4Q6PIL6 250 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 CLRN3Q8NCR9 226 aa5.89□□□□□ -1.47
SHROOM3-203ENST00000469923 SCO1O75880 301 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 TSHBP01222 138 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 AMTP48728 403 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 MIAQ16674 131 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 HIGD2BQ4VC39 106 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 TMEM97Q5BJF2 176 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 SMIM15Q7Z3B0 74 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 AMN1Q8IY45 258 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 C15orf56Q8N910 161 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 C9orf163Q8N9P6 203 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 COX11Q9Y6N1 276 aa5.88□□□□□ -1.47
SHROOM3-203ENST00000469923 A0A1B0GUV1 79 aa5.87□□□□□ -1.47
SHROOM3-203ENST00000469923 SMIM27A0A1W2PRY6 76 aa5.87□□□□□ -1.47
SHROOM3-203ENST00000469923 SDHAF1A6NFY7 115 aa5.87□□□□□ -1.47
SHROOM3-203ENST00000469923 PNRC1Q12796 327 aaPredicted RBP5.87□□□□□ -1.47
SHROOM3-203ENST00000469923 RIGQ13278 110 aa5.87□□□□□ -1.47
SHROOM3-203ENST00000469923 BORCS7Q96B45 105 aa5.87□□□□□ -1.47
SHROOM3-203ENST00000469923 TMEM191AQ9H0A3 160 aa5.87□□□□□ -1.47
SHROOM3-203ENST00000469923 TMEM242Q9NWH2 141 aa5.87□□□□□ -1.47
SHROOM3-203ENST00000469923 hDV102S1A0JD36 115 aa5.86□□□□□ -1.47
SHROOM3-203ENST00000469923 C7orf77A4D0Y5 90 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms