RNA–Protein interactions for RNA: ENST00000468570.1

SGIP1-208, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 324 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-208ENST00000468570 LINC00474Q9P2X8 69 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 KMT2BQ9UMN6 2715 aaPredicted RBP0.52□□□□□ -2.33
SGIP1-208ENST00000468570 NSD3Q9BZ95 1437 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 FANCAO15360 1455 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 ERVK-7P63135 1459 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 PLEKHH2Q8IVE3 1493 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 NLRP1Q9C000 1473 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 CFAP74Q9C0B2 1584 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 IQGAP3Q86VI3 1631 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 ITSN1Q15811 1721 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 KNDC1Q76NI1 1749 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 SUPT6HQ7KZ85 1726 aaKnown RBP0.52□□□□□ -2.33
SGIP1-208ENST00000468570 SCN11AQ9UI33 1791 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 ARFGEF2Q9Y6D5 1785 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 PDCD11Q14690 1871 aaKnown RBP0.52□□□□□ -2.33
SGIP1-208ENST00000468570 ASCC3Q8N3C0 2202 aaKnown RBP0.52□□□□□ -2.33
SGIP1-208ENST00000468570 TRBV30A0A0K0K1B3 111 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 UBE2L5PA0A1B0GUS4 154 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 NUPR2A6NF83 97 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 H3BQ15 152 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 CACNA1AO00555 2505 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 SSSCA1O60232 199 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 IGKCP01834 107 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 IL5P05113 134 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 EPRSP07814 1512 aaKnown RBP0.51□□□□□ -2.33
SGIP1-208ENST00000468570 SPTBP11277 2137 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 UBE2D1P51668 147 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 UBA52P62987 128 aaKnown RBP0.51□□□□□ -2.33
SGIP1-208ENST00000468570 UBE2L3P68036 154 aaKnown RBP0.51□□□□□ -2.33
SGIP1-208ENST00000468570 GOLGA3Q08378 1498 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 HMGXB3Q12766 1538 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 C9orf116Q5BN46 136 aaPredicted RBP0.51□□□□□ -2.33
SGIP1-208ENST00000468570 NHSL1Q5SYE7 1610 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 SPANXN1Q5VSR9 72 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 LYPD5Q6UWN5 251 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 COMMD6Q7Z4G1 85 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 SVBPQ8N300 66 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 TET1Q8NFU7 2136 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 THOC2Q8NI27 1593 aaKnown RBP0.51□□□□□ -2.33
SGIP1-208ENST00000468570 MYOZ3Q8TDC0 251 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 MED12Q93074 2177 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 TSLPQ969D9 159 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 SPTSSAQ969W0 71 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 LIMD2Q9BT23 127 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 DPY30Q9C005 99 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 PTPN23Q9H3S7 1636 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 NPVFQ9HCQ7 196 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 MRPL35Q9NZE8 188 aaKnown RBP0.51□□□□□ -2.33
SGIP1-208ENST00000468570 SCP2D1Q9UJQ7 156 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 ALKQ9UM73 1620 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 V9GYS6 101 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
SGIP1-208ENST00000468570 ZNF236Q9UL36 1845 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 MYO5CQ9NQX4 1742 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 PARP4Q9UKK3 1724 aaKnown RBP0.5□□□□□ -2.33
SGIP1-208ENST00000468570 KIF21AQ7Z4S6 1674 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 RAPGEF6Q8TEU7 1601 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 UNC13BO14795 1591 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 SETBP1Q9Y6X0 1596 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 ERICH3Q5RHP9 1530 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 EHBP1L1Q8N3D4 1523 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 NRXN1Q9ULB1 1477 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 BLMP54132 1417 aaPredicted RBP0.5□□□□□ -2.33
SGIP1-208ENST00000468570 RRBP1Q9P2E9 1410 aaKnown RBP0.5□□□□□ -2.33
SGIP1-208ENST00000468570 A0A087WTM6 91 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 TRBV7-1A0A0A6YYK4 115 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 TRBV10-1A0A0K0K1A3 114 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 TRBV7-7A0A0K0K1E9 115 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 NBDYA0A0U1RRE5 68 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 TMEM30CPA0ZSE6 113 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 C10orf142B7Z368 130 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 H3BQF6 201 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 CBLN1P23435 193 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 ATP5EP56381 51 aaPredicted RBP0.5□□□□□ -2.33
SGIP1-208ENST00000468570 FXYD4P59646 89 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 UBE2G1P62253 170 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 CCL8P80075 99 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 DCDP81605 110 aaKnown RBP0.5□□□□□ -2.33
SGIP1-208ENST00000468570 RBM3P98179 157 aaKnown RBP0.5□□□□□ -2.33
SGIP1-208ENST00000468570 Q5VV11 94 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 NDUFA11Q86Y39 141 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 RGPD8O14715 1765 aaPredicted RBP0.5□□□□□ -2.33
SGIP1-208ENST00000468570 RGPD5Q99666 1765 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 RGPD1P0DJD0 1748 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 IFT172Q9UG01 1749 aa0.5□□□□□ -2.33
SGIP1-208ENST00000468570 SHPRHQ149N8 1683 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 ZNF831Q5JPB2 1677 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 NESP48681 1621 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 TARBP1Q13395 1621 aaKnown RBP0.49□□□□□ -2.33
SGIP1-208ENST00000468570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.49□□□□□ -2.33
SGIP1-208ENST00000468570 CCDC141Q6ZP82 1450 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 MLH3Q9UHC1 1453 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 TRAV12-3A0A0B4J271 114 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 TRBV10-3A0A0K0K1G6 114 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 hADV29S1A0JD25 119 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 FAM24AA6NFZ4 105 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 HCG22E2RYF7 251 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 K7EP34 96 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 SIX6O95475 246 aa0.49□□□□□ -2.33
SGIP1-208ENST00000468570 TFF1P04155 84 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms