RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 NDUFA11Q86Y39 141 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 Q8N2B8 174 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 C10orf126Q8N4M7 172 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 LINC01600Q96MT4 127 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 TTTY13Q9BZ97 58 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 ESM1Q9NQ30 184 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 SPANXA1Q9NS26 97 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 PRO1854Q9UHT4 67 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 PRO0461Q9UI25 63 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 CACNA1BQ00975 2339 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 TPRP12270 2363 aaKnown RBP3.85□□□□□ -1.79
RIF1-209ENST00000467762 GVINP1Q7Z2Y8 2422 aa3.85□□□□□ -1.79
RIF1-209ENST00000467762 PTPRZ1P23471 2315 aaPredicted RBP3.84□□□□□ -1.79
RIF1-209ENST00000467762 A0A0J9YXY3 114 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 TEX48A0A1B0GUV7 120 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 TINCRA0A1B0GVN0 87 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 TIMM17BO60830 172 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 IGHV3-30P01768 117 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 IGHV4-59P01825 116 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 ZNF688P0C7X2 276 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 NHLRC4P0CG21 123 aaPredicted RBP3.84□□□□□ -1.79
RIF1-209ENST00000467762 P0DMU3 169 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 FAM231AP0DMU4 169 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 FAM231CP0DMU5 169 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 IGHV3-30-5P0DP03 117 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 RPL35AP18077 110 aaKnown RBP3.84□□□□□ -1.79
RIF1-209ENST00000467762 MRPS36P82909 103 aaKnown RBP3.84□□□□□ -1.79
RIF1-209ENST00000467762 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 MORN3Q6PF18 240 aaPredicted RBP3.84□□□□□ -1.79
RIF1-209ENST00000467762 AMTNQ6UX39 209 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 SBSPONQ8IVN8 264 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 PPDPFLQ8WWR9 84 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 AMELXQ99217 191 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 NAA38Q9BRA0 125 aaKnown RBP3.84□□□□□ -1.79
RIF1-209ENST00000467762 TIMM21Q9BVV7 248 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 DMXL1Q9Y485 3027 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 MUC4Q99102 2169 aa3.84□□□□□ -1.79
RIF1-209ENST00000467762 CFAP47Q6ZTR5 3102 aa3.84□□□□□ -1.8
RIF1-209ENST00000467762 AGRNO00468 2067 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 IGKV3-7A0A075B6H7 116 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 LYRM9A8MSI8 78 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 H3BMM0 161 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 APOMO95445 188 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 CFC1BP0CG36 223 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 CFC1P0CG37 223 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 SCGB1C2P0DMR2 95 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 IFITM1P13164 125 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 SYNJ2BPP57105 145 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 FOXI1Q12951 378 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 WFDC2Q14508 124 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 TCTEX1D4Q5JR98 221 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 CFAP126Q5VTH2 177 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 C4orf3Q8WVX3 66 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 C1QTNF4Q9BXJ3 329 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 SPANXDQ9BXN6 97 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 PPDPFQ9H3Y8 114 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 ZNF702PQ9H963 129 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 SPANXCQ9NY87 97 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 ERG28Q9UKR5 140 aa3.83□□□□□ -1.8
RIF1-209ENST00000467762 TLN1Q9Y490 2541 aaKnown RBP3.83□□□□□ -1.8
RIF1-209ENST00000467762 SMG1Q96Q15 3661 aaKnown RBP3.83□□□□□ -1.8
RIF1-209ENST00000467762 BOD1L1Q8NFC6 3051 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 IGLV4-3A0A075B6K6 122 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 A0A096LNT2 108 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 IGHV1-58A0A0C4DH39 117 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 LOC107984156A0A0G2JMH3 177 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 COX6CP09669 75 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 ZNF22P17026 224 aaPredicted RBP3.82□□□□□ -1.8
RIF1-209ENST00000467762 PSMB2P49721 201 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 RPL39P62891 51 aaKnown RBP3.82□□□□□ -1.8
RIF1-209ENST00000467762 CIRBPQ14011 172 aaKnown RBP3.82□□□□□ -1.8
RIF1-209ENST00000467762 ATXN8Q156A1 80 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 SPINK13Q1W4C9 94 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 ETDBQ3ZM63 59 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 FAM74A4Q5TZK3 123 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 FAM19A3Q7Z5A8 133 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 TEN1Q86WV5 123 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 ARL17AQ8IVW1 177 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 KLHL30-AS1Q8NEE0 82 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 ZNRF2Q8NHG8 242 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 OVOL2Q9BRP0 275 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 JPT2Q9H910 190 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 MUC6Q6W4X9 2439 aa3.82□□□□□ -1.8
RIF1-209ENST00000467762 IGLV9-49A0A0B4J1Y8 123 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 TRBV10-1A0A0K0K1A3 114 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 TRBV30A0A0K0K1B3 111 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 A0A1B0GV72 72 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 KALRNO60229 2985 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 INSP01308 110 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 IGHV3-53P01767 116 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 CD28P10747 220 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 DEFB1P60022 68 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 LINC00476Q8WZB0 136 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 DUX3Q96PT4 197 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 ATMQ13315 3056 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 ADGRG4Q8IZF6 3080 aa3.81□□□□□ -1.8
RIF1-209ENST00000467762 HIVEP3Q5T1R4 2406 aa3.8□□□□□ -1.8
RIF1-209ENST00000467762 TRAV12-2A0A075B6T6 113 aa3.8□□□□□ -1.8
RIF1-209ENST00000467762 IGLV5-45A0A087WSX0 123 aa3.8□□□□□ -1.8
RIF1-209ENST00000467762 H7C423 109 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms