RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 HMCN2Q8NDA2 5059 aa-0.1□□□□□ -2.43
XRN1-205ENST00000465507 LRRC37A3O60309 1634 aa-0.11□□□□□ -2.43
XRN1-205ENST00000465507 SMIM6P0DI80 62 aa-0.11□□□□□ -2.43
XRN1-205ENST00000465507 MEIG1Q5JSS6 88 aa-0.11□□□□□ -2.43
XRN1-205ENST00000465507 C10orf128Q5T292 105 aa-0.11□□□□□ -2.43
XRN1-205ENST00000465507 Q6AWC8 147 aa-0.11□□□□□ -2.43
XRN1-205ENST00000465507 CNFNQ9BYD5 112 aa-0.11□□□□□ -2.43
XRN1-205ENST00000465507 SERP1Q9Y6X1 66 aa-0.11□□□□□ -2.43
XRN1-205ENST00000465507 CACNA1AO00555 2505 aa-0.11□□□□□ -2.43
XRN1-205ENST00000465507 PXDNQ92626 1479 aa-0.11□□□□□ -2.43
XRN1-205ENST00000465507 A0A0D9SFI3 127 aa-0.12□□□□□ -2.43
XRN1-205ENST00000465507 K7EP13 123 aa-0.12□□□□□ -2.43
XRN1-205ENST00000465507 M0R135 149 aa-0.12□□□□□ -2.43
XRN1-205ENST00000465507 COPS9Q8WXC6 57 aa-0.12□□□□□ -2.43
XRN1-205ENST00000465507 R4GMQ9 66 aa-0.12□□□□□ -2.43
XRN1-205ENST00000465507 CFTRP13569 1480 aa-0.12□□□□□ -2.43
XRN1-205ENST00000465507 IFT172Q9UG01 1749 aa-0.13□□□□□ -2.43
XRN1-205ENST00000465507 SSPOA2VEC9 5147 aa-0.13□□□□□ -2.43
XRN1-205ENST00000465507 LOC100130705A0A1B0GUX0 176 aa-0.13□□□□□ -2.43
XRN1-205ENST00000465507 HMGN1P05114 100 aa-0.13□□□□□ -2.43
XRN1-205ENST00000465507 IFITM1P13164 125 aa-0.13□□□□□ -2.43
XRN1-205ENST00000465507 C12orf73Q69YU5 71 aa-0.13□□□□□ -2.43
XRN1-205ENST00000465507 SCN3BQ9NY72 215 aa-0.13□□□□□ -2.43
XRN1-205ENST00000465507 PRO0255Q9UI72 69 aa-0.13□□□□□ -2.43
XRN1-205ENST00000465507 NSD1Q96L73 2696 aaPredicted RBP-0.13□□□□□ -2.43
XRN1-205ENST00000465507 NCOR1O75376 2440 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 MRC1P22897 1456 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 FAM25AB3EWG3 89 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 FAM25CB3EWG5 89 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 FAM25GB3EWG6 89 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 BTG2P78543 158 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 SPAG11BQ08648 103 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 SPAG11AQ6PDA7 123 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 TTC9CQ8N5M4 171 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 AQP10Q96PS8 301 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 FAM107BQ9H098 131 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 NAA60Q9H7X0 242 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 NPVFQ9HCQ7 196 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 PI4KAP42356 2102 aa-0.14□□□□□ -2.43
XRN1-205ENST00000465507 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.15□□□□□ -2.43
XRN1-205ENST00000465507 PLCE1Q9P212 2302 aa-0.15□□□□□ -2.43
XRN1-205ENST00000465507 PIGBOS1A0A0B4J2F0 54 aa-0.15□□□□□ -2.43
XRN1-205ENST00000465507 BCE1O60756 84 aa-0.15□□□□□ -2.43
XRN1-205ENST00000465507 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.15□□□□□ -2.43
XRN1-205ENST00000465507 AMELXQ99217 191 aa-0.15□□□□□ -2.43
XRN1-205ENST00000465507 LENEPQ9Y5L5 61 aa-0.15□□□□□ -2.43
XRN1-205ENST00000465507 ZNF609O15014 1411 aa-0.15□□□□□ -2.43
XRN1-205ENST00000465507 FLNCQ14315 2725 aa-0.16□□□□□ -2.43
XRN1-205ENST00000465507 CFDP00746 253 aaPredicted RBP-0.16□□□□□ -2.44
XRN1-205ENST00000465507 Q56UQ5 140 aa-0.16□□□□□ -2.44
XRN1-205ENST00000465507 SMIM4Q8WVI0 70 aa-0.16□□□□□ -2.44
XRN1-205ENST00000465507 TSC22D3Q99576 134 aa-0.16□□□□□ -2.44
XRN1-205ENST00000465507 PPIP5K1Q6PFW1 1433 aa-0.16□□□□□ -2.44
XRN1-205ENST00000465507 PKDREJQ9NTG1 2253 aa-0.16□□□□□ -2.44
XRN1-205ENST00000465507 MBD5Q9P267 1494 aa-0.16□□□□□ -2.44
XRN1-205ENST00000465507 CTXND1A0A1B0GTU2 59 aa-0.17□□□□□ -2.44
XRN1-205ENST00000465507 ARAP2Q8WZ64 1704 aa-0.17□□□□□ -2.44
XRN1-205ENST00000465507 PPP3R2Q96LZ3 170 aa-0.17□□□□□ -2.44
XRN1-205ENST00000465507 LINC00472Q9H8W2 130 aa-0.17□□□□□ -2.44
XRN1-205ENST00000465507 V9GYH0 126 aa-0.17□□□□□ -2.44
XRN1-205ENST00000465507 SPEF2Q9C093 1822 aa-0.17□□□□□ -2.44
XRN1-205ENST00000465507 PTPN13Q12923 2485 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 KMT2AQ03164 3969 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 NWD2Q9ULI1 1742 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 C10orf142B7Z368 130 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 M0R3E3 92 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 FGF7P21781 194 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 HAMPP81172 84 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 WFDC2Q14508 124 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 TSLPQ969D9 159 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 SPANXDQ9BXN6 97 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 NDUFA4L2Q9NRX3 87 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 LAMC1P11047 1609 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 BIVM-ERCC5R4GMW8 1640 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 CHD6Q8TD26 2715 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 DOCK1Q14185 1865 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 PRDM2Q13029 1718 aa-0.18□□□□□ -2.44
XRN1-205ENST00000465507 LPAP08519 4548 aa-0.19□□□□□ -2.44
XRN1-205ENST00000465507 TRBV7-3A0A075B6L6 115 aa-0.19□□□□□ -2.44
XRN1-205ENST00000465507 TRAV22A0A0B4J277 110 aa-0.19□□□□□ -2.44
XRN1-205ENST00000465507 MIF4GDA9UHW6 222 aaKnown RBP-0.19□□□□□ -2.44
XRN1-205ENST00000465507 DOPEY2Q9Y3R5 2298 aa-0.19□□□□□ -2.44
XRN1-205ENST00000465507 MYH9P35579 1960 aaKnown RBP-0.19□□□□□ -2.44
XRN1-205ENST00000465507 HSPG2P98160 4391 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 FOCADQ5VW36 1801 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 MYCBP2O75592 4640 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 TENM4Q6N022 2769 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 PKD1L1Q8TDX9 2849 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 PHLPP1O60346 1717 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 APOC2P02655 101 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 CATR1Q13166 79 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 Q8IZM0 81 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 C1orf54Q8WWF1 131 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 SPCS1Q9Y6A9 102 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 USF3Q68DE3 2245 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 PLXNB2O15031 1838 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 PATJQ8NI35 1801 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 NHSL1Q5SYE7 1610 aa-0.2□□□□□ -2.44
XRN1-205ENST00000465507 CPSF1Q10570 1443 aaKnown RBP-0.21□□□□□ -2.44
XRN1-205ENST00000465507 VWFP04275 2813 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms