RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TMEM242Q9NWH2 141 aa13.6□□□□□ -0.23
SKA3-205ENST00000465471 TRBV27A0A0K0K1C4 114 aa13.59□□□□□ -0.23
SKA3-205ENST00000465471 TMEM262E9PQX1 116 aa13.59□□□□□ -0.23
SKA3-205ENST00000465471 I3L3M4 83 aa13.59□□□□□ -0.23
SKA3-205ENST00000465471 ELOBQ15370 118 aa13.59□□□□□ -0.23
SKA3-205ENST00000465471 DEFB104AQ8WTQ1 72 aa13.59□□□□□ -0.23
SKA3-205ENST00000465471 Q9HAA7 133 aa13.59□□□□□ -0.23
SKA3-205ENST00000465471 KLK12Q9UKR0 248 aa13.59□□□□□ -0.23
SKA3-205ENST00000465471 DYNC1H1Q14204 4646 aaKnown RBP13.59□□□□□ -0.23
SKA3-205ENST00000465471 TRBV24-1A0A075B6N3 115 aa13.58□□□□□ -0.24
SKA3-205ENST00000465471 TRAV8-3A0A0A6YYJ7 113 aa13.58□□□□□ -0.24
SKA3-205ENST00000465471 C7orf77A4D0Y5 90 aa13.58□□□□□ -0.24
SKA3-205ENST00000465471 AMTP48728 403 aa13.58□□□□□ -0.24
SKA3-205ENST00000465471 RBX1P62877 108 aa13.58□□□□□ -0.24
SKA3-205ENST00000465471 GAGE6Q13070 117 aa13.58□□□□□ -0.24
SKA3-205ENST00000465471 RHEBQ15382 184 aa13.58□□□□□ -0.24
SKA3-205ENST00000465471 Q8N976 141 aa13.58□□□□□ -0.24
SKA3-205ENST00000465471 CLRN3Q8NCR9 226 aa13.58□□□□□ -0.24
SKA3-205ENST00000465471 TRAV9-1A0A075B6T8 112 aa13.57□□□□□ -0.24
SKA3-205ENST00000465471 TSHBP01222 138 aa13.57□□□□□ -0.24
SKA3-205ENST00000465471 SUMO2P61956 95 aaKnown RBP13.57□□□□□ -0.24
SKA3-205ENST00000465471 A0A1B0GUV1 79 aa13.56□□□□□ -0.24
SKA3-205ENST00000465471 D6R8Y8 96 aa13.56□□□□□ -0.24
SKA3-205ENST00000465471 PMCHP20382 165 aa13.56□□□□□ -0.24
SKA3-205ENST00000465471 CKS2P33552 79 aa13.56□□□□□ -0.24
SKA3-205ENST00000465471 APCSP02743 223 aa13.55□□□□□ -0.24
SKA3-205ENST00000465471 PPBPP02775 128 aa13.55□□□□□ -0.24
SKA3-205ENST00000465471 RPL32P62910 135 aaKnown RBP13.55□□□□□ -0.24
SKA3-205ENST00000465471 ENHOQ6UWT2 76 aa13.55□□□□□ -0.24
SKA3-205ENST00000465471 C20orf78Q9BR46 151 aa13.55□□□□□ -0.24
SKA3-205ENST00000465471 PRR34Q9NV39 138 aa13.55□□□□□ -0.24
SKA3-205ENST00000465471 PHOX2AO14813 284 aa13.54□□□□□ -0.24
SKA3-205ENST00000465471 ANGP03950 147 aaKnown RBP13.54□□□□□ -0.24
SKA3-205ENST00000465471 ESDP10768 282 aa13.54□□□□□ -0.24
SKA3-205ENST00000465471 C20orf203Q8NBC4 194 aa13.54□□□□□ -0.24
SKA3-205ENST00000465471 DNAH5Q8TE73 4624 aa13.53□□□□□ -0.24
SKA3-205ENST00000465471 A0A087WTM6 91 aa13.53□□□□□ -0.24
SKA3-205ENST00000465471 H7C423 109 aa13.53□□□□□ -0.24
SKA3-205ENST00000465471 VCYO14598 125 aa13.53□□□□□ -0.24
SKA3-205ENST00000465471 TNFRSF6BO95407 300 aa13.53□□□□□ -0.24
SKA3-205ENST00000465471 Q0VG73 95 aa13.53□□□□□ -0.24
SKA3-205ENST00000465471 UBE2WQ96B02 151 aa13.53□□□□□ -0.24
SKA3-205ENST00000465471 TM2D2Q9BX73 214 aa13.53□□□□□ -0.24
SKA3-205ENST00000465471 LRCOL1A6NCL2 159 aa13.52□□□□□ -0.25
SKA3-205ENST00000465471 UBE2L6O14933 153 aa13.52□□□□□ -0.25
SKA3-205ENST00000465471 NPYP01303 97 aa13.52□□□□□ -0.25
SKA3-205ENST00000465471 APOC3P02656 99 aa13.52□□□□□ -0.25
SKA3-205ENST00000465471 ORMDL3Q8N138 153 aa13.52□□□□□ -0.25
SKA3-205ENST00000465471 RPS10P5Q9NQ39 176 aa13.52□□□□□ -0.25
SKA3-205ENST00000465471 IGLV4-60A0A075B6I1 120 aa13.51□□□□□ -0.25
SKA3-205ENST00000465471 PSCAO43653 123 aa13.51□□□□□ -0.25
SKA3-205ENST00000465471 TMEM136Q6ZRR5 245 aa13.51□□□□□ -0.25
SKA3-205ENST00000465471 SVBPQ8N300 66 aa13.51□□□□□ -0.25
SKA3-205ENST00000465471 RMI2Q96E14 147 aa13.51□□□□□ -0.25
SKA3-205ENST00000465471 COX11Q9Y6N1 276 aa13.51□□□□□ -0.25
SKA3-205ENST00000465471 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.5□□□□□ -0.25
SKA3-205ENST00000465471 IGKV2-29A2NJV5 120 aaPredicted RBP13.5□□□□□ -0.25
SKA3-205ENST00000465471 S100PP25815 95 aa13.5□□□□□ -0.25
SKA3-205ENST00000465471 NDUFA5Q16718 116 aa13.5□□□□□ -0.25
SKA3-205ENST00000465471 MAPKAPK5-AS1Q8N8E1 139 aa13.5□□□□□ -0.25
SKA3-205ENST00000465471 SMIM2Q9BVW6 85 aa13.5□□□□□ -0.25
SKA3-205ENST00000465471 SNAPINO95295 136 aa13.49□□□□□ -0.25
SKA3-205ENST00000465471 CRPP02741 224 aa13.49□□□□□ -0.25
SKA3-205ENST00000465471 KRTAP10-2P60368 255 aa13.49□□□□□ -0.25
SKA3-205ENST00000465471 MIAQ16674 131 aa13.49□□□□□ -0.25
SKA3-205ENST00000465471 LINC00269Q8N2A0 174 aa13.49□□□□□ -0.25
SKA3-205ENST00000465471 PRELID3AQ96N28 172 aa13.49□□□□□ -0.25
SKA3-205ENST00000465471 LAMTOR2Q9Y2Q5 125 aa13.49□□□□□ -0.25
SKA3-205ENST00000465471 SPATA12Q7Z6I5 190 aa13.48□□□□□ -0.25
SKA3-205ENST00000465471 KIR2DL4Q99706 377 aa13.48□□□□□ -0.25
SKA3-205ENST00000465471 IGKV2D-24A0A075B6R9 120 aa13.47□□□□□ -0.25
SKA3-205ENST00000465471 PRSS47A8MTI9 375 aa13.47□□□□□ -0.25
SKA3-205ENST00000465471 EREGO14944 169 aa13.47□□□□□ -0.25
SKA3-205ENST00000465471 FGF6P10767 208 aa13.47□□□□□ -0.25
SKA3-205ENST00000465471 REG3AQ06141 175 aa13.47□□□□□ -0.25
SKA3-205ENST00000465471 LRP1BQ9NZR2 4599 aa13.47□□□□□ -0.25
SKA3-205ENST00000465471 ZNF25P17030 456 aaPredicted RBP13.46□□□□□ -0.25
SKA3-205ENST00000465471 FCER1GP30273 86 aa13.46□□□□□ -0.25
SKA3-205ENST00000465471 LCE2DQ5TA82 110 aaPredicted RBP13.46□□□□□ -0.25
SKA3-205ENST00000465471 CLPSL2Q6UWE3 100 aa13.46□□□□□ -0.25
SKA3-205ENST00000465471 MRPL52Q86TS9 123 aaKnown RBP13.46□□□□□ -0.25
SKA3-205ENST00000465471 C1orf43Q9BWL3 253 aa13.46□□□□□ -0.25
SKA3-205ENST00000465471 TCAPO15273 167 aa13.45□□□□□ -0.26
SKA3-205ENST00000465471 WFDC2Q14508 124 aa13.45□□□□□ -0.26
SKA3-205ENST00000465471 AMMECR1LQ6DCA0 310 aa13.45□□□□□ -0.26
SKA3-205ENST00000465471 KRTAP26-1Q6PEX3 210 aa13.45□□□□□ -0.26
SKA3-205ENST00000465471 GNB1LQ9BYB4 327 aa13.45□□□□□ -0.26
SKA3-205ENST00000465471 HLA-DQA1P01909 254 aa13.44□□□□□ -0.26
SKA3-205ENST00000465471 SLC7A5P1Q8MH63 180 aa13.44□□□□□ -0.26
SKA3-205ENST00000465471 COX19Q49B96 90 aa13.43□□□□□ -0.26
SKA3-205ENST00000465471 CDPF1Q6NVV7 123 aa13.42□□□□□ -0.26
SKA3-205ENST00000465471 RNASEKQ6P5S7 137 aaKnown RBP13.42□□□□□ -0.26
SKA3-205ENST00000465471 Q8N814 137 aa13.42□□□□□ -0.26
SKA3-205ENST00000465471 PGPEP1Q9NXJ5 209 aa13.42□□□□□ -0.26
SKA3-205ENST00000465471 TRAV8-4A0A0B4J246 113 aa13.41□□□□□ -0.26
SKA3-205ENST00000465471 C16orf90A8MZG2 172 aa13.41□□□□□ -0.26
SKA3-205ENST00000465471 MAP1LC3AQ9H492 121 aa13.41□□□□□ -0.26
SKA3-205ENST00000465471 CSDC2Q9Y534 153 aaKnown RBP13.41□□□□□ -0.26
SKA3-205ENST00000465471 MT-ND6P03923 174 aa13.4□□□□□ -0.26
SKA3-205ENST00000465471 BAALCQ8WXS3 180 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms