RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 GNG7O60262 68 aa0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 SPINK1P00995 79 aa0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 HIST1H1DP16402 221 aaKnown RBP0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 GCHFRP30047 84 aa0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 S100A7L2Q5SY68 101 aa0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 C12orf73Q69YU5 71 aa0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 TSC22D3Q99576 134 aa0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 PDCD10Q9BUL8 212 aa0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 LINC00312Q9Y6C7 94 aa0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 IFT172Q9UG01 1749 aa0.13□□□□□ -2.39
TM9SF3-203ENST00000464654 QRICH2Q9H0J4 1663 aa0.12□□□□□ -2.39
TM9SF3-203ENST00000464654 HCG22E2RYF7 251 aa0.12□□□□□ -2.39
TM9SF3-203ENST00000464654 SMIM6P0DI80 62 aa0.12□□□□□ -2.39
TM9SF3-203ENST00000464654 FGF7P21781 194 aa0.12□□□□□ -2.39
TM9SF3-203ENST00000464654 CCL18P55774 89 aa0.12□□□□□ -2.39
TM9SF3-203ENST00000464654 MEIG1Q5JSS6 88 aa0.12□□□□□ -2.39
TM9SF3-203ENST00000464654 FAM213BQ8TBF2 198 aa0.12□□□□□ -2.39
TM9SF3-203ENST00000464654 PRDM2Q13029 1718 aa0.12□□□□□ -2.39
TM9SF3-203ENST00000464654 DOCK1Q14185 1865 aa0.12□□□□□ -2.39
TM9SF3-203ENST00000464654 NCOR1O75376 2440 aa0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 TRAV13-2A0A0B4J235 113 aa0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 PIGBOS1A0A0B4J2F0 54 aa0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 LOC100130705A0A1B0GUX0 176 aa0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 EFCAB10A6NFE3 127 aa0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 Q5BKY6 102 aa0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 BAGE3Q86Y29 109 aa0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 ALMS1Q8TCU4 4167 aa0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
TM9SF3-203ENST00000464654 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
TM9SF3-203ENST00000464654 TRAV1-2A0A0B4J238 106 aa0.1□□□□□ -2.39
TM9SF3-203ENST00000464654 UBE2DNLQ8IWF7 75 aa0.1□□□□□ -2.39
TM9SF3-203ENST00000464654 NAA60Q9H7X0 242 aa0.1□□□□□ -2.39
TM9SF3-203ENST00000464654 MYH8P13535 1937 aa0.1□□□□□ -2.39
TM9SF3-203ENST00000464654 ANKRD17O75179 2603 aaKnown RBP0.1□□□□□ -2.39
TM9SF3-203ENST00000464654 A2ML1A8K2U0 1454 aa0.1□□□□□ -2.39
TM9SF3-203ENST00000464654 AKAP6Q13023 2319 aa0.09□□□□□ -2.39
TM9SF3-203ENST00000464654 ZNF815PA8K554 130 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 FAM25AB3EWG3 89 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 FAM25CB3EWG5 89 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 FAM25GB3EWG6 89 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 PIN1P1O15428 100 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 IFITM1P13164 125 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 RBM3P98179 157 aaKnown RBP0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 Q56UQ5 140 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 AQP10Q96PS8 301 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 NAIPQ13075 1403 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 ABCA2Q9BZC7 2435 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 CHD6Q8TD26 2715 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 NALCNQ8IZF0 1738 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 ARAP2Q8WZ64 1704 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 PLCE1Q9P212 2302 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 MRC1P22897 1456 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 SHROOM2Q13796 1616 aa0.09□□□□□ -2.4
TM9SF3-203ENST00000464654 DOCK2Q92608 1830 aa0.08□□□□□ -2.4
TM9SF3-203ENST00000464654 PPIP5K1Q6PFW1 1433 aa0.08□□□□□ -2.4
TM9SF3-203ENST00000464654 SARNPP82979 210 aaKnown RBP0.08□□□□□ -2.4
TM9SF3-203ENST00000464654 NPVFQ9HCQ7 196 aa0.08□□□□□ -2.4
TM9SF3-203ENST00000464654 LENEPQ9Y5L5 61 aa0.08□□□□□ -2.4
TM9SF3-203ENST00000464654 R4GMQ9 66 aa0.08□□□□□ -2.4
TM9SF3-203ENST00000464654 ROCK2O75116 1388 aaKnown RBP0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 PIEZO2Q9H5I5 2752 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 DSTQ03001 7570 aaKnown RBP0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 KDM3BQ7LBC6 1761 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 ZNF609O15014 1411 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 CPSF1Q10570 1443 aaKnown RBP0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 PTPRQQ9UMZ3 2332 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 CACNA1AO00555 2505 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 A0A0D9SFI3 127 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 PPP1R17O96001 155 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 CFDP00746 253 aaPredicted RBP0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 SPINK8P0C7L1 97 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 C10orf128Q5T292 105 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 CFAP126Q5VTH2 177 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 RPL13AP3Q6NVV1 102 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 SSBP3-AS1Q7Z2R9 100 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 PP6455Q8WZ26 134 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 AMELXQ99217 191 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 SPANXDQ9BXN6 97 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 U3KQA8 63 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 PLXNB2O15031 1838 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 NEBP20929 6669 aa0.07□□□□□ -2.4
TM9SF3-203ENST00000464654 WNK2Q9Y3S1 2297 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 CTXND1A0A1B0GTU2 59 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 DLEU1O43261 78 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 APOC2P02655 101 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 TTC9CQ8N5M4 171 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 SMIM4Q8WVI0 70 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 PPP3R2Q96LZ3 170 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 CNFNQ9BYD5 112 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 CYP4F30PQ9H0H9 118 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 SCN3BQ9NY72 215 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 PRO0255Q9UI72 69 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 GVINP1Q7Z2Y8 2422 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 HECTD4Q9Y4D8 3996 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 WNK3Q9BYP7 1800 aa0.06□□□□□ -2.4
TM9SF3-203ENST00000464654 LAMC1P11047 1609 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 SPTBN1Q01082 2364 aaKnown RBP0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 TRAV22A0A0B4J277 110 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 MIF4GDA9UHW6 222 aaKnown RBP0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms