RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 XCL1P47992 114 aa6.85□□□□□ -1.31
HPS4-208ENST00000464362 RHOHQ15669 191 aa6.85□□□□□ -1.31
HPS4-208ENST00000464362 COL5A1P20908 1838 aaPredicted RBP6.85□□□□□ -1.31
HPS4-208ENST00000464362 A0A0J9YY99 117 aa6.85□□□□□ -1.31
HPS4-208ENST00000464362 TINCRA0A1B0GVN0 87 aa6.85□□□□□ -1.31
HPS4-208ENST00000464362 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
HPS4-208ENST00000464362 H3BUA1 57 aa6.85□□□□□ -1.31
HPS4-208ENST00000464362 ANKRD29Q8N6D5 301 aa6.85□□□□□ -1.31
HPS4-208ENST00000464362 PROK1P58294 105 aa6.84□□□□□ -1.31
HPS4-208ENST00000464362 CLEC2BQ92478 149 aa6.84□□□□□ -1.31
HPS4-208ENST00000464362 A0A0J9YX75 114 aa6.84□□□□□ -1.31
HPS4-208ENST00000464362 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
HPS4-208ENST00000464362 TRAV12-1A0A0B4J245 112 aa6.84□□□□□ -1.31
HPS4-208ENST00000464362 F5H768 121 aa6.84□□□□□ -1.31
HPS4-208ENST00000464362 MUC4Q99102 2169 aa6.84□□□□□ -1.32
HPS4-208ENST00000464362 EDN2P20800 178 aa6.84□□□□□ -1.32
HPS4-208ENST00000464362 TEN1Q86WV5 123 aa6.84□□□□□ -1.32
HPS4-208ENST00000464362 A8MZ25 164 aa6.83□□□□□ -1.32
HPS4-208ENST00000464362 FOXI1Q12951 378 aa6.83□□□□□ -1.32
HPS4-208ENST00000464362 C20orf203Q8NBC4 194 aa6.83□□□□□ -1.32
HPS4-208ENST00000464362 A0A1W2PPR1 153 aa6.83□□□□□ -1.32
HPS4-208ENST00000464362 CCL24O00175 119 aa6.83□□□□□ -1.32
HPS4-208ENST00000464362 C5orf47Q569G3 176 aa6.83□□□□□ -1.32
HPS4-208ENST00000464362 SPENQ96T58 3664 aaKnown RBP6.83□□□□□ -1.32
HPS4-208ENST00000464362 IGHV3-30-3P0DP02 117 aa6.83□□□□□ -1.32
HPS4-208ENST00000464362 LINC01620Q4KN68 170 aa6.83□□□□□ -1.32
HPS4-208ENST00000464362 ZFHX4Q86UP3 3567 aa6.83□□□□□ -1.32
HPS4-208ENST00000464362 TCL1BO95988 128 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 SS18Q15532 418 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 A6NDX4 124 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 TNFRSF13BO14836 293 aaPredicted RBP6.82□□□□□ -1.32
HPS4-208ENST00000464362 DEFB4AO15263 64 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
HPS4-208ENST00000464362 HERVK_113P63121 156 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 Q6ZUT4 128 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 NDUFA11Q86Y39 141 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 GPHB5Q86YW7 130 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 TIMM17AQ99595 171 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 TMEM126AQ9H061 195 aa6.82□□□□□ -1.32
HPS4-208ENST00000464362 FSTL3O95633 263 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 ANGP03950 147 aaKnown RBP6.81□□□□□ -1.32
HPS4-208ENST00000464362 INSL3P51460 131 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 EBI3Q14213 229 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 NRACQ8N912 160 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 NEXN-AS1Q8NBZ9 246 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 A0A096LNJ9 63 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 J3KT08 172 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 BOD1L1Q8NFC6 3051 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 MRPS12O15235 138 aaKnown RBP6.81□□□□□ -1.32
HPS4-208ENST00000464362 MT-ATP8P03928 68 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 C11orf71Q6IPW1 123 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 SHISA2Q6UWI4 295 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 U3KQK5 164 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 AKAP13Q12802 2813 aa6.81□□□□□ -1.32
HPS4-208ENST00000464362 F8W735 103 aaPredicted RBP6.8□□□□□ -1.32
HPS4-208ENST00000464362 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
HPS4-208ENST00000464362 TM2D2Q9BX73 214 aa6.8□□□□□ -1.32
HPS4-208ENST00000464362 CLPSL1A2RUU4 121 aa6.8□□□□□ -1.32
HPS4-208ENST00000464362 K7EMT4 169 aa6.8□□□□□ -1.32
HPS4-208ENST00000464362 ICOSQ9Y6W8 199 aa6.8□□□□□ -1.32
HPS4-208ENST00000464362 RAI1Q7Z5J4 1906 aaPredicted RBP6.8□□□□□ -1.32
HPS4-208ENST00000464362 TRACP01848 142 aa6.8□□□□□ -1.32
HPS4-208ENST00000464362 BAALC-AS2P0C853 105 aa6.8□□□□□ -1.32
HPS4-208ENST00000464362 Q8N6K4 173 aa6.8□□□□□ -1.32
HPS4-208ENST00000464362 J3QLI3 93 aa6.79□□□□□ -1.32
HPS4-208ENST00000464362 DAD1P61803 113 aa6.79□□□□□ -1.32
HPS4-208ENST00000464362 MRGPRG-AS1Q2M3A8 158 aa6.79□□□□□ -1.32
HPS4-208ENST00000464362 CDKN2A-AS1Q9UH64 79 aa6.79□□□□□ -1.32
HPS4-208ENST00000464362 F8P00451 2351 aa6.79□□□□□ -1.32
HPS4-208ENST00000464362 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
HPS4-208ENST00000464362 HHLA3Q9XRX5 114 aa6.79□□□□□ -1.32
HPS4-208ENST00000464362 HECTD1Q9ULT8 2610 aa6.78□□□□□ -1.32
HPS4-208ENST00000464362 SRSF2Q01130 221 aaKnown RBP6.78□□□□□ -1.32
HPS4-208ENST00000464362 Q6ZTI0 123 aa6.78□□□□□ -1.32
HPS4-208ENST00000464362 K7EQG2 157 aa6.78□□□□□ -1.32
HPS4-208ENST00000464362 CRLF1O75462 422 aa6.78□□□□□ -1.32
HPS4-208ENST00000464362 AVPP01185 164 aa6.78□□□□□ -1.32
HPS4-208ENST00000464362 CMC4P56277 68 aaPredicted RBP6.78□□□□□ -1.32
HPS4-208ENST00000464362 HAMPP81172 84 aa6.78□□□□□ -1.32
HPS4-208ENST00000464362 SND1-IT1Q9HBX3 110 aa6.78□□□□□ -1.32
HPS4-208ENST00000464362 CFAP47Q6ZTR5 3102 aa6.78□□□□□ -1.32
HPS4-208ENST00000464362 A0A0J9YXY3 114 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 TEX49A0A1B0GTD5 131 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 ZNF22P17026 224 aaPredicted RBP6.77□□□□□ -1.33
HPS4-208ENST00000464362 HIST2H2BCQ6DN03 193 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 C18orf65Q6ZTR6 163 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 VSIG2Q96IQ7 327 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 Q9HAA7 133 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 TRBV7-3A0A075B6L6 115 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 TRAV4A0A0B4J268 109 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 IGHG4P01861 327 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 SLC25A29Q8N8R3 303 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 SOCS3O14543 225 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 INAFM2P0DMQ5 153 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 NDUFV3P56181 108 aaKnown RBP6.77□□□□□ -1.33
HPS4-208ENST00000464362 LINC00467Q9BRT7 94 aa6.77□□□□□ -1.33
HPS4-208ENST00000464362 IGLV4-3A0A075B6K6 122 aa6.76□□□□□ -1.33
HPS4-208ENST00000464362 IGHV4-4A0A075B6R2 117 aa6.76□□□□□ -1.33
HPS4-208ENST00000464362 M0QXV9 152 aa6.76□□□□□ -1.33
HPS4-208ENST00000464362 M0QY20 66 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms