RNA–Protein interactions for RNA: ENST00000463948.1

EGFR-209, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-209ENST00000463948 AP1S3Q96PC3 154 aa12.19□□□□□ -0.46
EGFR-209ENST00000463948 USP17L23D6RBM5 183 aa12.18□□□□□ -0.46
EGFR-209ENST00000463948 HLA-DQA1P01909 254 aa12.18□□□□□ -0.46
EGFR-209ENST00000463948 SERTAD4-AS1Q5TG53 156 aa12.18□□□□□ -0.46
EGFR-209ENST00000463948 CNFNQ9BYD5 112 aa12.18□□□□□ -0.46
EGFR-209ENST00000463948 OXTP01178 125 aa12.17□□□□□ -0.46
EGFR-209ENST00000463948 TSKUQ8WUA8 353 aa12.17□□□□□ -0.46
EGFR-209ENST00000463948 FAM231BA6NCW3 169 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 PRSS1P07477 247 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 NTF3P20783 257 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 FOXA3P55318 350 aaPredicted RBP12.16□□□□□ -0.46
EGFR-209ENST00000463948 UQCC3Q6UW78 93 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 CLPSL2Q6UWE3 100 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 NTM-AS1Q6ZSK4 140 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 GFRA4Q9GZZ7 299 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 KIF25-AS1Q9Y6Z4 181 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 V9GYV3 84 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 HMCN2Q8NDA2 5059 aa12.16□□□□□ -0.46
EGFR-209ENST00000463948 SMIM17P0DL12 118 aa12.15□□□□□ -0.46
EGFR-209ENST00000463948 RPL37AP61513 92 aaKnown RBP12.15□□□□□ -0.46
EGFR-209ENST00000463948 GAGE6Q13070 117 aa12.15□□□□□ -0.46
EGFR-209ENST00000463948 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
EGFR-209ENST00000463948 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.14□□□□□ -0.47
EGFR-209ENST00000463948 RBX1P62877 108 aa12.13□□□□□ -0.47
EGFR-209ENST00000463948 TWIST1Q15672 202 aa12.13□□□□□ -0.47
EGFR-209ENST00000463948 LINC00269Q8N2A0 174 aa12.13□□□□□ -0.47
EGFR-209ENST00000463948 PGLYRP4Q96LB8 373 aa12.13□□□□□ -0.47
EGFR-209ENST00000463948 PKHD1L1Q86WI1 4243 aa12.13□□□□□ -0.47
EGFR-209ENST00000463948 UBR4Q5T4S7 5183 aa12.12□□□□□ -0.47
EGFR-209ENST00000463948 HIGD1CA8MV81 97 aa12.12□□□□□ -0.47
EGFR-209ENST00000463948 HNRNPA3P51991 378 aaKnown RBP12.12□□□□□ -0.47
EGFR-209ENST00000463948 MIAQ16674 131 aa12.12□□□□□ -0.47
EGFR-209ENST00000463948 LINC00862A6NCI5 91 aa12.11□□□□□ -0.47
EGFR-209ENST00000463948 PNRC1Q12796 327 aaPredicted RBP12.11□□□□□ -0.47
EGFR-209ENST00000463948 COMMD7Q86VX2 200 aa12.11□□□□□ -0.47
EGFR-209ENST00000463948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.11□□□□□ -0.47
EGFR-209ENST00000463948 TMEM218A2RU14 115 aa12.1□□□□□ -0.47
EGFR-209ENST00000463948 PANO1I0J062 215 aa12.1□□□□□ -0.47
EGFR-209ENST00000463948 PKIAP61925 76 aa12.1□□□□□ -0.47
EGFR-209ENST00000463948 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
EGFR-209ENST00000463948 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
EGFR-209ENST00000463948 BORCS7Q96B45 105 aa12.1□□□□□ -0.47
EGFR-209ENST00000463948 DPH3P1Q9H4G8 78 aa12.1□□□□□ -0.47
EGFR-209ENST00000463948 IGLV10-54A0A075B6I4 117 aa12.09□□□□□ -0.47
EGFR-209ENST00000463948 A0A1B0GUT8 65 aa12.09□□□□□ -0.47
EGFR-209ENST00000463948 MGPP08493 103 aa12.09□□□□□ -0.47
EGFR-209ENST00000463948 KRTAP26-1Q6PEX3 210 aa12.09□□□□□ -0.47
EGFR-209ENST00000463948 NAT8BQ9UHF3 227 aa12.09□□□□□ -0.47
EGFR-209ENST00000463948 PLA2G2DQ9UNK4 145 aa12.09□□□□□ -0.47
EGFR-209ENST00000463948 SMIM27A0A1W2PRY6 76 aa12.08□□□□□ -0.48
EGFR-209ENST00000463948 TMEM97Q5BJF2 176 aa12.08□□□□□ -0.48
EGFR-209ENST00000463948 SMIM15Q7Z3B0 74 aa12.08□□□□□ -0.48
EGFR-209ENST00000463948 NUP35Q8NFH5 326 aa12.08□□□□□ -0.48
EGFR-209ENST00000463948 PRR34Q9NV39 138 aa12.08□□□□□ -0.48
EGFR-209ENST00000463948 TRBV25-1A0A075B6N4 114 aa12.07□□□□□ -0.48
EGFR-209ENST00000463948 M0QY20 66 aa12.07□□□□□ -0.48
EGFR-209ENST00000463948 ADCYAP1P18509 176 aa12.07□□□□□ -0.48
EGFR-209ENST00000463948 SUMO4Q6EEV6 95 aa12.07□□□□□ -0.48
EGFR-209ENST00000463948 SDIM1Q6ZPB5 146 aa12.07□□□□□ -0.48
EGFR-209ENST00000463948 F8W036 122 aa12.06□□□□□ -0.48
EGFR-209ENST00000463948 H7C1H1 209 aa12.06□□□□□ -0.48
EGFR-209ENST00000463948 PPP1R2P9O14990 202 aa12.06□□□□□ -0.48
EGFR-209ENST00000463948 DPH3Q96FX2 82 aa12.06□□□□□ -0.48
EGFR-209ENST00000463948 IGHV1-24A0A0C4DH33 117 aa12.05□□□□□ -0.48
EGFR-209ENST00000463948 MT-ND4LP03901 98 aa12.04□□□□□ -0.48
EGFR-209ENST00000463948 REG3AQ06141 175 aa12.04□□□□□ -0.48
EGFR-209ENST00000463948 RIGQ13278 110 aa12.04□□□□□ -0.48
EGFR-209ENST00000463948 IQCJQ1A5X6 159 aa12.04□□□□□ -0.48
EGFR-209ENST00000463948 SEC11CQ9BY50 192 aa12.04□□□□□ -0.48
EGFR-209ENST00000463948 hDV102S1A0JD36 115 aa12.03□□□□□ -0.48
EGFR-209ENST00000463948 RASL11AQ6T310 242 aa12.03□□□□□ -0.48
EGFR-209ENST00000463948 ANAPC16Q96DE5 110 aa12.03□□□□□ -0.48
EGFR-209ENST00000463948 TMEM191AQ9H0A3 160 aa12.03□□□□□ -0.48
EGFR-209ENST00000463948 C20orf203Q8NBC4 194 aa12.02□□□□□ -0.49
EGFR-209ENST00000463948 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.49
EGFR-209ENST00000463948 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
EGFR-209ENST00000463948 A0A1B0GW15 77 aa12.01□□□□□ -0.49
EGFR-209ENST00000463948 GATD1Q8NB37 220 aa12.01□□□□□ -0.49
EGFR-209ENST00000463948 NIT2Q9NQR4 276 aa12.01□□□□□ -0.49
EGFR-209ENST00000463948 TRAV26-2A0A0B4J265 109 aa12□□□□□ -0.49
EGFR-209ENST00000463948 SLPIP03973 132 aa12□□□□□ -0.49
EGFR-209ENST00000463948 C10orf91Q5T1B1 145 aa12□□□□□ -0.49
EGFR-209ENST00000463948 TMEM243Q9BU79 118 aa12□□□□□ -0.49
EGFR-209ENST00000463948 CHTF8P0CG12 524 aa11.99□□□□□ -0.49
EGFR-209ENST00000463948 TRAV8-4A0A0B4J246 113 aa11.98□□□□□ -0.49
EGFR-209ENST00000463948 CNBPP62633 177 aaKnown RBP11.98□□□□□ -0.49
EGFR-209ENST00000463948 RNF185Q96GF1 192 aa11.98□□□□□ -0.49
EGFR-209ENST00000463948 AP5S1Q9NUS5 200 aa11.98□□□□□ -0.49
EGFR-209ENST00000463948 CARHSP1Q9Y2V2 147 aaKnown RBP11.98□□□□□ -0.49
EGFR-209ENST00000463948 IGHV3-64A0A075B6Q5 118 aa11.97□□□□□ -0.49
EGFR-209ENST00000463948 A0A1B0GXF2 115 aa11.97□□□□□ -0.49
EGFR-209ENST00000463948 RAB4AP20338 218 aa11.97□□□□□ -0.49
EGFR-209ENST00000463948 CAMPP49913 170 aa11.97□□□□□ -0.49
EGFR-209ENST00000463948 MRPL54Q6P161 138 aaKnown RBP11.97□□□□□ -0.49
EGFR-209ENST00000463948 AMN1Q8IY45 258 aa11.97□□□□□ -0.49
EGFR-209ENST00000463948 A0A087WYN8 130 aa11.96□□□□□ -0.49
EGFR-209ENST00000463948 A0A1B0GUV1 79 aa11.96□□□□□ -0.49
EGFR-209ENST00000463948 S100A8P05109 93 aa11.96□□□□□ -0.49
EGFR-209ENST00000463948 MT1HL1P0DM35 61 aa11.96□□□□□ -0.49
EGFR-209ENST00000463948 HBBP68871 147 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms