RNA–Protein interactions for RNA: ENST00000463727.1

PTPRE-205, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best)

Gene PTPRE, Length 3,944 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-205ENST00000463727 INSL3P51460 131 aa7.74□□□□□ -1.17
PTPRE-205ENST00000463727 IGLV4-3A0A075B6K6 122 aa7.74□□□□□ -1.17
PTPRE-205ENST00000463727 TRAV8-3A0A0A6YYJ7 113 aa7.74□□□□□ -1.17
PTPRE-205ENST00000463727 NXPH4O95158 308 aa7.74□□□□□ -1.17
PTPRE-205ENST00000463727 IGHV3-30P01768 117 aa7.74□□□□□ -1.17
PTPRE-205ENST00000463727 IGHV3-30-5P0DP03 117 aa7.74□□□□□ -1.17
PTPRE-205ENST00000463727 UBE2D1P51668 147 aa7.74□□□□□ -1.17
PTPRE-205ENST00000463727 APRG1Q8IVJ8 170 aa7.74□□□□□ -1.17
PTPRE-205ENST00000463727 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
PTPRE-205ENST00000463727 CFAP126Q5VTH2 177 aa7.73□□□□□ -1.17
PTPRE-205ENST00000463727 PRIMA1Q86XR5 153 aa7.73□□□□□ -1.17
PTPRE-205ENST00000463727 ANKRD29Q8N6D5 301 aa7.73□□□□□ -1.17
PTPRE-205ENST00000463727 KIF25-AS1Q9Y6Z4 181 aa7.73□□□□□ -1.17
PTPRE-205ENST00000463727 TLN2Q9Y4G6 2542 aa7.73□□□□□ -1.17
PTPRE-205ENST00000463727 TMEM61Q8N0U2 210 aa7.73□□□□□ -1.17
PTPRE-205ENST00000463727 TSHBP01222 138 aa7.72□□□□□ -1.17
PTPRE-205ENST00000463727 NFE4Q86UQ8 179 aa7.72□□□□□ -1.17
PTPRE-205ENST00000463727 A0A0J9YXY3 114 aa7.72□□□□□ -1.17
PTPRE-205ENST00000463727 ZFYVE26Q68DK2 2539 aa7.72□□□□□ -1.17
PTPRE-205ENST00000463727 TACC2O95359 2948 aa7.72□□□□□ -1.17
PTPRE-205ENST00000463727 H3BMM0 161 aa7.72□□□□□ -1.17
PTPRE-205ENST00000463727 UBE2WQ96B02 151 aa7.72□□□□□ -1.17
PTPRE-205ENST00000463727 FAM19A4Q96LR4 140 aa7.72□□□□□ -1.17
PTPRE-205ENST00000463727 IGHV1-58A0A0C4DH39 117 aa7.71□□□□□ -1.17
PTPRE-205ENST00000463727 LINC00315P59091 139 aa7.71□□□□□ -1.17
PTPRE-205ENST00000463727 LINC01620Q4KN68 170 aa7.71□□□□□ -1.17
PTPRE-205ENST00000463727 TRGV4A0A0C4DH28 118 aa7.71□□□□□ -1.18
PTPRE-205ENST00000463727 PROK1P58294 105 aa7.71□□□□□ -1.18
PTPRE-205ENST00000463727 TSPEAR-AS2P59090 65 aa7.71□□□□□ -1.18
PTPRE-205ENST00000463727 GAGE12JA6NER3 117 aa7.71□□□□□ -1.18
PTPRE-205ENST00000463727 GAGE4Q13068 117 aa7.71□□□□□ -1.18
PTPRE-205ENST00000463727 GAGE5Q13069 117 aa7.71□□□□□ -1.18
PTPRE-205ENST00000463727 SONP18583 2426 aaKnown RBP7.7□□□□□ -1.18
PTPRE-205ENST00000463727 CCDC168Q8NDH2 2452 aa7.7□□□□□ -1.18
PTPRE-205ENST00000463727 A0A0B4J2C4 111 aa7.7□□□□□ -1.18
PTPRE-205ENST00000463727 DNAL4O96015 105 aa7.7□□□□□ -1.18
PTPRE-205ENST00000463727 IGHV3-33P01772 117 aa7.7□□□□□ -1.18
PTPRE-205ENST00000463727 DNAJC30Q96LL9 226 aa7.7□□□□□ -1.18
PTPRE-205ENST00000463727 SPATA25Q9BR10 227 aa7.7□□□□□ -1.18
PTPRE-205ENST00000463727 CRYBA4P53673 196 aa7.7□□□□□ -1.18
PTPRE-205ENST00000463727 HERVK_113P63121 156 aa7.7□□□□□ -1.18
PTPRE-205ENST00000463727 RNF152Q8N8N0 203 aa7.7□□□□□ -1.18
PTPRE-205ENST00000463727 Q9H8V8 135 aa7.69□□□□□ -1.18
PTPRE-205ENST00000463727 IFITM1P13164 125 aa7.69□□□□□ -1.18
PTPRE-205ENST00000463727 Q6ZUT4 128 aa7.69□□□□□ -1.18
PTPRE-205ENST00000463727 DAND5Q8N907 189 aa7.69□□□□□ -1.18
PTPRE-205ENST00000463727 Q96MF0 132 aa7.69□□□□□ -1.18
PTPRE-205ENST00000463727 CHCHD5Q9BSY4 110 aa7.69□□□□□ -1.18
PTPRE-205ENST00000463727 PYGO1Q9Y3Y4 419 aa7.69□□□□□ -1.18
PTPRE-205ENST00000463727 ICOSQ9Y6W8 199 aa7.69□□□□□ -1.18
PTPRE-205ENST00000463727 FLNBO75369 2602 aaKnown RBP7.68□□□□□ -1.18
PTPRE-205ENST00000463727 PRM2P04554 102 aa7.68□□□□□ -1.18
PTPRE-205ENST00000463727 UBE2D3P61077 147 aa7.68□□□□□ -1.18
PTPRE-205ENST00000463727 UBE2D2P62837 147 aa7.68□□□□□ -1.18
PTPRE-205ENST00000463727 OR13C6PQ8NH95 151 aa7.68□□□□□ -1.18
PTPRE-205ENST00000463727 CARD19Q96LW7 228 aa7.68□□□□□ -1.18
PTPRE-205ENST00000463727 POLQO75417 2590 aa7.68□□□□□ -1.18
PTPRE-205ENST00000463727 LRBAP50851 2863 aa7.68□□□□□ -1.18
PTPRE-205ENST00000463727 RPL35AP18077 110 aaKnown RBP7.68□□□□□ -1.18
PTPRE-205ENST00000463727 SETD2Q9BYW2 2564 aaPredicted RBP7.68□□□□□ -1.18
PTPRE-205ENST00000463727 MT-ATP8P03928 68 aa7.67□□□□□ -1.18
PTPRE-205ENST00000463727 Q6YL49 198 aa7.67□□□□□ -1.18
PTPRE-205ENST00000463727 TINCRA0A1B0GVN0 87 aa7.67□□□□□ -1.18
PTPRE-205ENST00000463727 LINC00158P58513 81 aa7.67□□□□□ -1.18
PTPRE-205ENST00000463727 MAP6D1Q9H9H5 199 aa7.67□□□□□ -1.18
PTPRE-205ENST00000463727 CMC4P56277 68 aaPredicted RBP7.67□□□□□ -1.18
PTPRE-205ENST00000463727 CFHR3Q02985 330 aa7.67□□□□□ -1.18
PTPRE-205ENST00000463727 TRBV10-2A0A0K0K1G8 114 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 MIAQ16674 131 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 POM121L12Q8N7R1 296 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 VSIG2Q96IQ7 327 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 LINC00467Q9BRT7 94 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 TMEM243Q9BU79 118 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 GAGE7O76087 117 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 CRPP02741 224 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 GAGE12FP0CL80 117 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 GAGE12GP0CL81 117 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 GAGE12IP0CL82 117 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 ZNF580Q9UK33 172 aa7.66□□□□□ -1.18
PTPRE-205ENST00000463727 LRRK2Q5S007 2527 aa7.65□□□□□ -1.18
PTPRE-205ENST00000463727 ZNF462Q96JM2 2506 aa7.65□□□□□ -1.18
PTPRE-205ENST00000463727 ZNF702PQ9H963 129 aa7.65□□□□□ -1.18
PTPRE-205ENST00000463727 PRO0461Q9UI25 63 aa7.65□□□□□ -1.18
PTPRE-205ENST00000463727 A8MZ25 164 aa7.65□□□□□ -1.18
PTPRE-205ENST00000463727 DOPEY1Q5JWR5 2465 aa7.65□□□□□ -1.18
PTPRE-205ENST00000463727 PKD1L2Q7Z442 2459 aa7.65□□□□□ -1.18
PTPRE-205ENST00000463727 MRPS36P82909 103 aaKnown RBP7.65□□□□□ -1.19
PTPRE-205ENST00000463727 TMEM263Q8WUH6 116 aaKnown RBP7.65□□□□□ -1.19
PTPRE-205ENST00000463727 NOP10Q9NPE3 64 aaKnown RBP7.65□□□□□ -1.19
PTPRE-205ENST00000463727 TRIAP1O43715 76 aa7.64□□□□□ -1.19
PTPRE-205ENST00000463727 C15orf53Q8NAA6 179 aa7.64□□□□□ -1.19
PTPRE-205ENST00000463727 CLEC2BQ92478 149 aa7.64□□□□□ -1.19
PTPRE-205ENST00000463727 ITPR1Q14643 2758 aa7.64□□□□□ -1.19
PTPRE-205ENST00000463727 C4orf3Q8WVX3 66 aa7.64□□□□□ -1.19
PTPRE-205ENST00000463727 CCL24O00175 119 aa7.64□□□□□ -1.19
PTPRE-205ENST00000463727 PRB1P04280 392 aa7.64□□□□□ -1.19
PTPRE-205ENST00000463727 C18orf65Q6ZTR6 163 aa7.64□□□□□ -1.19
PTPRE-205ENST00000463727 TRBV30A0A0K0K1B3 111 aa7.63□□□□□ -1.19
PTPRE-205ENST00000463727 DEFB114Q30KQ6 69 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms