RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 HSPB8Q9UJY1 196 aa5.19□□□□□ -1.58
EPHA4-210ENST00000463446 TRBV6-8A0A0A6YYG3 113 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 ATP5LO75964 103 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 NPYP01303 97 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 S100A2P29034 98 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 IFI27P40305 119 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-210ENST00000463446 AMTP48728 403 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 IQCJQ1A5X6 159 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 AMMECR1LQ6DCA0 310 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 Q6ZSN1 163 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 RPL39LQ96EH5 51 aaKnown RBP5.18□□□□□ -1.58
EPHA4-210ENST00000463446 VSIG2Q96IQ7 327 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 TMEM243Q9BU79 118 aa5.18□□□□□ -1.58
EPHA4-210ENST00000463446 CSDC2Q9Y534 153 aaKnown RBP5.18□□□□□ -1.58
EPHA4-210ENST00000463446 A0A087WX48 190 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 A0A096LPF7 62 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 A0A1B0GUV1 79 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 TMEM262E9PQX1 116 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 SMKR1H3BMG3 65 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST1H2BKO60814 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST1H2BJP06899 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST1H2BOP23527 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST1H2BBP33778 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 NDUFA6P56556 154 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST1H2BDP58876 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST1H2BCP62807 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST2H2BEQ16778 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 COA6Q5JTJ3 125 aaKnown RBP5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.17□□□□□ -1.58
EPHA4-210ENST00000463446 LYPD5Q6UWN5 251 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 Q6ZN92 141 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 C10orf126Q8N4M7 172 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST1H2BHQ93079 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 TMEM141Q96I45 108 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST1H2BNQ99877 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 HIST1H2BMQ99879 126 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 TIMM21Q9BVV7 248 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 SPANXA1Q9NS26 97 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 CYSLTR1Q9Y271 337 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 PYGO1Q9Y3Y4 419 aa5.17□□□□□ -1.58
EPHA4-210ENST00000463446 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-210ENST00000463446 HBDP02042 147 aa5.16□□□□□ -1.58
EPHA4-210ENST00000463446 ESDP10768 282 aa5.16□□□□□ -1.58
EPHA4-210ENST00000463446 SEC11AP67812 179 aa5.16□□□□□ -1.58
EPHA4-210ENST00000463446 RNASEKQ6P5S7 137 aaKnown RBP5.16□□□□□ -1.58
EPHA4-210ENST00000463446 ERASQ7Z444 233 aa5.16□□□□□ -1.58
EPHA4-210ENST00000463446 CHCHD5Q9BSY4 110 aa5.16□□□□□ -1.58
EPHA4-210ENST00000463446 NOTCH1P46531 2555 aa5.16□□□□□ -1.58
EPHA4-210ENST00000463446 NBEAL1Q6ZS30 2694 aa5.15□□□□□ -1.58
EPHA4-210ENST00000463446 A6NJY4 79 aa5.15□□□□□ -1.59
EPHA4-210ENST00000463446 LEPROTL1O95214 131 aa5.15□□□□□ -1.59
EPHA4-210ENST00000463446 MRPL52Q86TS9 123 aaKnown RBP5.15□□□□□ -1.59
EPHA4-210ENST00000463446 UBE2DNLQ8IWF7 75 aa5.15□□□□□ -1.59
EPHA4-210ENST00000463446 C20orf203Q8NBC4 194 aa5.15□□□□□ -1.59
EPHA4-210ENST00000463446 TOMM6Q96B49 74 aa5.15□□□□□ -1.59
EPHA4-210ENST00000463446 SCGB3A1Q96QR1 104 aa5.15□□□□□ -1.59
EPHA4-210ENST00000463446 COX11Q9Y6N1 276 aa5.15□□□□□ -1.59
EPHA4-210ENST00000463446 ANK2Q01484 3957 aa5.15□□□□□ -1.59
EPHA4-210ENST00000463446 IGLV2-18A0A075B6J9 118 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 IGHV3-38A0A0C4DH36 116 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 TSHBP01222 138 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 LINC00694P0DN24 101 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 C2orf66Q6UXQ4 117 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 OR5A1Q8NGJ0 315 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 RMI2Q96E14 147 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 TIMM17AQ99595 171 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 C2orf88Q9BSF0 95 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 UPK3BQ9BT76 320 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 MAP1LC3CQ9BXW4 147 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 VCX2Q9H322 139 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 APLNQ9ULZ1 77 aa5.14□□□□□ -1.59
EPHA4-210ENST00000463446 MRPS16Q9Y3D3 137 aaKnown RBP5.14□□□□□ -1.59
EPHA4-210ENST00000463446 NBEAL2Q6ZNJ1 2754 aa5.13□□□□□ -1.59
EPHA4-210ENST00000463446 TRAV8-4A0A0B4J246 113 aa5.13□□□□□ -1.59
EPHA4-210ENST00000463446 SIVA1O15304 175 aa5.13□□□□□ -1.59
EPHA4-210ENST00000463446 SERF1AO75920 110 aa5.13□□□□□ -1.59
EPHA4-210ENST00000463446 PRSS1P07477 247 aa5.13□□□□□ -1.59
EPHA4-210ENST00000463446 MRPS36P82909 103 aaKnown RBP5.13□□□□□ -1.59
EPHA4-210ENST00000463446 ESRGQ1W209 222 aa5.13□□□□□ -1.59
EPHA4-210ENST00000463446 TTC32Q5I0X7 151 aa5.13□□□□□ -1.59
EPHA4-210ENST00000463446 LGALS9CQ6DKI2 356 aa5.13□□□□□ -1.59
EPHA4-210ENST00000463446 Q9H8V8 135 aa5.13□□□□□ -1.59
EPHA4-210ENST00000463446 TRAV8-3A0A0A6YYJ7 113 aa5.12□□□□□ -1.59
EPHA4-210ENST00000463446 LOC100131303A0A0U1RQF7 123 aa5.12□□□□□ -1.59
EPHA4-210ENST00000463446 C20orf202A1L168 122 aa5.12□□□□□ -1.59
EPHA4-210ENST00000463446 C5orf52A6NGY3 159 aa5.12□□□□□ -1.59
EPHA4-210ENST00000463446 SS18Q15532 418 aa5.12□□□□□ -1.59
EPHA4-210ENST00000463446 LINC01556Q5JQF7 62 aa5.12□□□□□ -1.59
EPHA4-210ENST00000463446 TEX43Q6ZNM6 134 aa5.12□□□□□ -1.59
EPHA4-210ENST00000463446 ZNF664Q8N3J9 261 aa5.12□□□□□ -1.59
EPHA4-210ENST00000463446 GAS8-AS1O95177 125 aa5.11□□□□□ -1.59
EPHA4-210ENST00000463446 DNAH10OSP0CZ25 163 aa5.11□□□□□ -1.59
EPHA4-210ENST00000463446 FGF6P10767 208 aa5.11□□□□□ -1.59
EPHA4-210ENST00000463446 SNRPEP62304 92 aaKnown RBP5.11□□□□□ -1.59
EPHA4-210ENST00000463446 CASC10Q5T4H9 136 aa5.11□□□□□ -1.59
EPHA4-210ENST00000463446 NTM-AS1Q6ZSK4 140 aa5.11□□□□□ -1.59
EPHA4-210ENST00000463446 NFE4Q86UQ8 179 aa5.11□□□□□ -1.59
EPHA4-210ENST00000463446 IFI27L1Q96BM0 104 aa5.11□□□□□ -1.59
EPHA4-210ENST00000463446 TM2D2Q9BX73 214 aa5.11□□□□□ -1.59
EPHA4-210ENST00000463446 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms