RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 ZNF22P17026 224 aaPredicted RBP10.81□□□□□ -0.68
NCL-207ENST00000461347 DSCR9P59020 149 aa10.81□□□□□ -0.68
NCL-207ENST00000461347 CLEC2BQ92478 149 aa10.81□□□□□ -0.68
NCL-207ENST00000461347 A0A1W2PPR1 153 aa10.81□□□□□ -0.68
NCL-207ENST00000461347 C19orf84I3L1E1 186 aa10.81□□□□□ -0.68
NCL-207ENST00000461347 POLR2KP53803 58 aaKnown RBP10.81□□□□□ -0.68
NCL-207ENST00000461347 C10orf99Q6UWK7 81 aa10.8□□□□□ -0.68
NCL-207ENST00000461347 SPATA25Q9BR10 227 aa10.8□□□□□ -0.68
NCL-207ENST00000461347 A0A0J9YXY3 114 aa10.8□□□□□ -0.68
NCL-207ENST00000461347 RPL35AP18077 110 aaKnown RBP10.8□□□□□ -0.68
NCL-207ENST00000461347 GAGE2AQ6NT46 116 aa10.8□□□□□ -0.68
NCL-207ENST00000461347 ELANEP08246 267 aa10.8□□□□□ -0.68
NCL-207ENST00000461347 M0QY20 66 aa10.79□□□□□ -0.68
NCL-207ENST00000461347 IGHV3-30P01768 117 aa10.79□□□□□ -0.68
NCL-207ENST00000461347 IGHV3-30-5P0DP03 117 aa10.79□□□□□ -0.68
NCL-207ENST00000461347 ZFYVE26Q68DK2 2539 aa10.79□□□□□ -0.68
NCL-207ENST00000461347 TRBV27A0A0K0K1C4 114 aa10.79□□□□□ -0.68
NCL-207ENST00000461347 EDN2P20800 178 aa10.79□□□□□ -0.68
NCL-207ENST00000461347 SPANXA1Q9NS26 97 aa10.79□□□□□ -0.68
NCL-207ENST00000461347 IGLV4-3A0A075B6K6 122 aa10.78□□□□□ -0.68
NCL-207ENST00000461347 LINC01619G3V211 115 aa10.78□□□□□ -0.68
NCL-207ENST00000461347 IGHV3-33P01772 117 aa10.78□□□□□ -0.68
NCL-207ENST00000461347 XGP55808 180 aa10.78□□□□□ -0.68
NCL-207ENST00000461347 TEX49A0A1B0GTD5 131 aa10.78□□□□□ -0.68
NCL-207ENST00000461347 TRBV10-2A0A0K0K1G8 114 aa10.77□□□□□ -0.69
NCL-207ENST00000461347 IGIPA6NJ69 53 aa10.77□□□□□ -0.69
NCL-207ENST00000461347 LGALS9O00182 355 aa10.77□□□□□ -0.69
NCL-207ENST00000461347 PROK1P58294 105 aa10.77□□□□□ -0.69
NCL-207ENST00000461347 IGHV1-58A0A0C4DH39 117 aa10.77□□□□□ -0.69
NCL-207ENST00000461347 TMEM223A0PJW6 202 aa10.77□□□□□ -0.69
NCL-207ENST00000461347 RBMY1BA6NDE4 496 aaKnown RBP10.77□□□□□ -0.69
NCL-207ENST00000461347 RBMY1EA6NEQ0 496 aaKnown RBP10.77□□□□□ -0.69
NCL-207ENST00000461347 RBMY1DP0C7P1 496 aaKnown RBP10.77□□□□□ -0.69
NCL-207ENST00000461347 RBMY1A1P0DJD3 496 aaKnown RBP10.77□□□□□ -0.69
NCL-207ENST00000461347 RBMY1CP0DJD4 496 aa10.77□□□□□ -0.69
NCL-207ENST00000461347 PFN2P35080 140 aa10.77□□□□□ -0.69
NCL-207ENST00000461347 UBE2D1P51668 147 aa10.77□□□□□ -0.69
NCL-207ENST00000461347 HERVK_113P63121 156 aa10.76□□□□□ -0.69
NCL-207ENST00000461347 A8MZ25 164 aa10.76□□□□□ -0.69
NCL-207ENST00000461347 KLLNB2CW77 178 aa10.76□□□□□ -0.69
NCL-207ENST00000461347 TSPEAR-AS2P59090 65 aa10.76□□□□□ -0.69
NCL-207ENST00000461347 VPREB3Q9UKI3 123 aa10.76□□□□□ -0.69
NCL-207ENST00000461347 PRRC2AP48634 2157 aaKnown RBP10.76□□□□□ -0.69
NCL-207ENST00000461347 K7EQG2 157 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 PKD1L2Q7Z442 2459 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 C9orf153Q5TBE3 101 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 A0A0B4J2C4 111 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 MTORP42345 2549 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 IGLV4-69A0A075B6H9 119 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 PRM2P04554 102 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 NSUN5P1Q3KNT7 163 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 C6orf226Q5I0X4 101 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 NFE4Q86UQ8 179 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 TMEM61Q8N0U2 210 aa10.75□□□□□ -0.69
NCL-207ENST00000461347 RS1O15537 224 aa10.74□□□□□ -0.69
NCL-207ENST00000461347 TRIAP1O43715 76 aa10.74□□□□□ -0.69
NCL-207ENST00000461347 CRYGDP07320 174 aa10.74□□□□□ -0.69
NCL-207ENST00000461347 RPL32P62910 135 aaKnown RBP10.74□□□□□ -0.69
NCL-207ENST00000461347 TRBV6-5A0A0K0K1A5 114 aa10.73□□□□□ -0.69
NCL-207ENST00000461347 EDA2RQ9HAV5 297 aa10.73□□□□□ -0.69
NCL-207ENST00000461347 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
NCL-207ENST00000461347 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
NCL-207ENST00000461347 TMEM243Q9BU79 118 aa10.73□□□□□ -0.69
NCL-207ENST00000461347 MAP1AP78559 2803 aaPredicted RBP10.73□□□□□ -0.69
NCL-207ENST00000461347 TSHBP01222 138 aa10.73□□□□□ -0.69
NCL-207ENST00000461347 CDKN2A-AS1Q9UH64 79 aa10.73□□□□□ -0.69
NCL-207ENST00000461347 JMJD1CQ15652 2540 aa10.72□□□□□ -0.69
NCL-207ENST00000461347 TMEM86BQ8N661 226 aa10.72□□□□□ -0.69
NCL-207ENST00000461347 VSIG2Q96IQ7 327 aa10.72□□□□□ -0.69
NCL-207ENST00000461347 DCANP1Q8TF63 244 aa10.72□□□□□ -0.69
NCL-207ENST00000461347 ADGRG4Q8IZF6 3080 aa10.71□□□□□ -0.69
NCL-207ENST00000461347 BAALC-AS2P0C853 105 aa10.71□□□□□ -0.69
NCL-207ENST00000461347 CCDC179H3BU77 68 aa10.71□□□□□ -0.69
NCL-207ENST00000461347 MIAQ16674 131 aa10.71□□□□□ -0.69
NCL-207ENST00000461347 LINC01546A6NGU7 62 aa10.71□□□□□ -0.7
NCL-207ENST00000461347 PF4P02776 101 aa10.71□□□□□ -0.7
NCL-207ENST00000461347 CRIP2P52943 208 aaPredicted RBP10.71□□□□□ -0.7
NCL-207ENST00000461347 NOP10Q9NPE3 64 aaKnown RBP10.71□□□□□ -0.7
NCL-207ENST00000461347 ZNF580Q9UK33 172 aa10.71□□□□□ -0.7
NCL-207ENST00000461347 H3BT86 120 aa10.7□□□□□ -0.7
NCL-207ENST00000461347 INAFM2P0DMQ5 153 aa10.7□□□□□ -0.7
NCL-207ENST00000461347 UBE2D3P61077 147 aa10.7□□□□□ -0.7
NCL-207ENST00000461347 UBE2D2P62837 147 aa10.7□□□□□ -0.7
NCL-207ENST00000461347 LINC00467Q9BRT7 94 aa10.7□□□□□ -0.7
NCL-207ENST00000461347 HTN3P15516 51 aa10.7□□□□□ -0.7
NCL-207ENST00000461347 SPENQ96T58 3664 aaKnown RBP10.7□□□□□ -0.7
NCL-207ENST00000461347 HIST1H4AP62805 103 aaKnown RBP10.69□□□□□ -0.7
NCL-207ENST00000461347 SOCS3O14543 225 aa10.69□□□□□ -0.7
NCL-207ENST00000461347 C9orf85Q96MD7 179 aa10.69□□□□□ -0.7
NCL-207ENST00000461347 ODF3Q96PU9 254 aa10.69□□□□□ -0.7
NCL-207ENST00000461347 NXPH4O95158 308 aa10.68□□□□□ -0.7
NCL-207ENST00000461347 MALP21145 153 aa10.67□□□□□ -0.7
NCL-207ENST00000461347 ZFHX4Q86UP3 3567 aa10.67□□□□□ -0.7
NCL-207ENST00000461347 J3QLI3 93 aa10.67□□□□□ -0.7
NCL-207ENST00000461347 DNAJC30Q96LL9 226 aa10.67□□□□□ -0.7
NCL-207ENST00000461347 TRAV4A0A0B4J268 109 aa10.67□□□□□ -0.7
NCL-207ENST00000461347 HIST2H2BDQ6DRA6 164 aa10.67□□□□□ -0.7
NCL-207ENST00000461347 M0QXV9 152 aa10.67□□□□□ -0.7
NCL-207ENST00000461347 NDUFV3P56181 108 aaKnown RBP10.67□□□□□ -0.7
NCL-207ENST00000461347 C5orf38Q86SI9 138 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms