RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ORAOV1Q8WV07 137 aa10.23□□□□□ -0.77
ERCC3-205ENST00000460485 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
ERCC3-205ENST00000460485 HTN1P15515 57 aa10.22□□□□□ -0.77
ERCC3-205ENST00000460485 C1orf158Q8N1D5 194 aa10.22□□□□□ -0.77
ERCC3-205ENST00000460485 LINC00469Q8N7U9 141 aa10.22□□□□□ -0.77
ERCC3-205ENST00000460485 OR11H2Q8NH07 326 aa10.22□□□□□ -0.77
ERCC3-205ENST00000460485 TRAV4A0A0B4J268 109 aa10.21□□□□□ -0.77
ERCC3-205ENST00000460485 PRSS29PA6NIE9 313 aa10.21□□□□□ -0.77
ERCC3-205ENST00000460485 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
ERCC3-205ENST00000460485 C19orf73Q9NVV2 129 aa10.21□□□□□ -0.77
ERCC3-205ENST00000460485 C11orf86A6NJI1 115 aa10.2□□□□□ -0.78
ERCC3-205ENST00000460485 E9PLD3 99 aa10.2□□□□□ -0.78
ERCC3-205ENST00000460485 GTSCR1Q86UQ5 136 aa10.2□□□□□ -0.78
ERCC3-205ENST00000460485 NFE4Q86UQ8 179 aa10.2□□□□□ -0.78
ERCC3-205ENST00000460485 AZU1P20160 251 aa10.19□□□□□ -0.78
ERCC3-205ENST00000460485 NEGR1Q7Z3B1 354 aa10.19□□□□□ -0.78
ERCC3-205ENST00000460485 OR4C5Q8NGB2 326 aa10.19□□□□□ -0.78
ERCC3-205ENST00000460485 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
ERCC3-205ENST00000460485 COX11Q9Y6N1 276 aa10.19□□□□□ -0.78
ERCC3-205ENST00000460485 COTL1Q14019 142 aa10.18□□□□□ -0.78
ERCC3-205ENST00000460485 MRPL16Q9NX20 251 aaKnown RBP10.18□□□□□ -0.78
ERCC3-205ENST00000460485 ZNF25P17030 456 aaPredicted RBP10.17□□□□□ -0.78
ERCC3-205ENST00000460485 RRN3P1Q2M238 152 aa10.17□□□□□ -0.78
ERCC3-205ENST00000460485 PCP2Q8IVA1 136 aa10.17□□□□□ -0.78
ERCC3-205ENST00000460485 CITED1Q99966 193 aa10.17□□□□□ -0.78
ERCC3-205ENST00000460485 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
ERCC3-205ENST00000460485 TIMM21Q9BVV7 248 aa10.17□□□□□ -0.78
ERCC3-205ENST00000460485 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
ERCC3-205ENST00000460485 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
ERCC3-205ENST00000460485 IGKV2D-26A0A0A0MRZ7 120 aa10.16□□□□□ -0.78
ERCC3-205ENST00000460485 TRGV1A0A0A0MS02 117 aa10.16□□□□□ -0.78
ERCC3-205ENST00000460485 SMIM9A6NGZ8 99 aa10.16□□□□□ -0.78
ERCC3-205ENST00000460485 K7EQD1 137 aa10.16□□□□□ -0.78
ERCC3-205ENST00000460485 RPL39P62891 51 aaKnown RBP10.16□□□□□ -0.78
ERCC3-205ENST00000460485 RPL36AP83881 106 aaKnown RBP10.16□□□□□ -0.78
ERCC3-205ENST00000460485 DAZ4Q86SG3 579 aaKnown RBP10.16□□□□□ -0.78
ERCC3-205ENST00000460485 RPL36ALQ969Q0 106 aaKnown RBP10.16□□□□□ -0.78
ERCC3-205ENST00000460485 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
ERCC3-205ENST00000460485 DAZ3Q9NR90 486 aaKnown RBP10.16□□□□□ -0.78
ERCC3-205ENST00000460485 MYMXA0A1B0GTQ4 84 aa10.15□□□□□ -0.78
ERCC3-205ENST00000460485 P0DMU3 169 aa10.15□□□□□ -0.78
ERCC3-205ENST00000460485 FAM231AP0DMU4 169 aa10.15□□□□□ -0.78
ERCC3-205ENST00000460485 FAM231CP0DMU5 169 aa10.15□□□□□ -0.78
ERCC3-205ENST00000460485 KRTAP10-3P60369 221 aa10.15□□□□□ -0.78
ERCC3-205ENST00000460485 CSNK1G2-AS1Q8NCQ2 148 aa10.15□□□□□ -0.78
ERCC3-205ENST00000460485 VCX2Q9H322 139 aa10.15□□□□□ -0.78
ERCC3-205ENST00000460485 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
ERCC3-205ENST00000460485 IGHV3OR16-12A0A075B7B8 117 aa10.14□□□□□ -0.79
ERCC3-205ENST00000460485 GIG44P09565 113 aaPredicted RBP10.14□□□□□ -0.79
ERCC3-205ENST00000460485 MRPS36P82909 103 aaKnown RBP10.14□□□□□ -0.79
ERCC3-205ENST00000460485 RYR3Q15413 4870 aa10.13□□□□□ -0.79
ERCC3-205ENST00000460485 IGLV4-3A0A075B6K6 122 aa10.13□□□□□ -0.79
ERCC3-205ENST00000460485 TRBV6-4A0A1B0GX49 114 aa10.13□□□□□ -0.79
ERCC3-205ENST00000460485 H3BRM9 83 aa10.13□□□□□ -0.79
ERCC3-205ENST00000460485 KIR2DL5BQ8NHK3 375 aa10.13□□□□□ -0.79
ERCC3-205ENST00000460485 AMELXQ99217 191 aa10.13□□□□□ -0.79
ERCC3-205ENST00000460485 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
ERCC3-205ENST00000460485 TM2D2Q9BX73 214 aa10.13□□□□□ -0.79
ERCC3-205ENST00000460485 IGHV3-73A0A0B4J1V6 119 aa10.12□□□□□ -0.79
ERCC3-205ENST00000460485 TRAV8-6A0A0B4J262 113 aa10.12□□□□□ -0.79
ERCC3-205ENST00000460485 H7C423 109 aa10.12□□□□□ -0.79
ERCC3-205ENST00000460485 TP73-AS1Q9UF72 201 aa10.12□□□□□ -0.79
ERCC3-205ENST00000460485 TAX1BP3O14907 124 aa10.11□□□□□ -0.79
ERCC3-205ENST00000460485 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
ERCC3-205ENST00000460485 PLEKHB2Q96CS7 222 aa10.11□□□□□ -0.79
ERCC3-205ENST00000460485 CHCHD7Q9BUK0 85 aa10.11□□□□□ -0.79
ERCC3-205ENST00000460485 GTSF1LQ9H1H1 148 aa10.11□□□□□ -0.79
ERCC3-205ENST00000460485 CSDC2Q9Y534 153 aaKnown RBP10.11□□□□□ -0.79
ERCC3-205ENST00000460485 TMEM238LA0A1B0GVL6 79 aa10.1□□□□□ -0.79
ERCC3-205ENST00000460485 PLAC8L1A1L4L8 177 aa10.1□□□□□ -0.79
ERCC3-205ENST00000460485 A6NJY4 79 aa10.1□□□□□ -0.79
ERCC3-205ENST00000460485 APOC4P55056 127 aa10.1□□□□□ -0.79
ERCC3-205ENST00000460485 Q6ZTI0 123 aa10.1□□□□□ -0.79
ERCC3-205ENST00000460485 CEND1Q8N111 149 aa10.1□□□□□ -0.79
ERCC3-205ENST00000460485 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
ERCC3-205ENST00000460485 UBE2D4Q9Y2X8 147 aa10.1□□□□□ -0.79
ERCC3-205ENST00000460485 TRGV2A0A075B6R0 118 aa10.09□□□□□ -0.79
ERCC3-205ENST00000460485 ZNF815PA8K554 130 aa10.09□□□□□ -0.79
ERCC3-205ENST00000460485 UBE2D3P61077 147 aa10.09□□□□□ -0.79
ERCC3-205ENST00000460485 UBE2D2P62837 147 aa10.09□□□□□ -0.79
ERCC3-205ENST00000460485 TMEM170BQ5T4T1 132 aa10.09□□□□□ -0.79
ERCC3-205ENST00000460485 KPRPQ5T749 579 aaPredicted RBP10.09□□□□□ -0.79
ERCC3-205ENST00000460485 Q6ZSN1 163 aa10.09□□□□□ -0.79
ERCC3-205ENST00000460485 TINCRA0A1B0GVN0 87 aa10.08□□□□□ -0.8
ERCC3-205ENST00000460485 LEPROTO15243 131 aa10.08□□□□□ -0.8
ERCC3-205ENST00000460485 SMIM13P0DJ93 91 aa10.08□□□□□ -0.8
ERCC3-205ENST00000460485 LGALS3P17931 250 aaKnown RBP10.08□□□□□ -0.8
ERCC3-205ENST00000460485 UBE2V1Q13404 147 aa10.08□□□□□ -0.8
ERCC3-205ENST00000460485 LINC00612Q8N6U2 182 aa10.08□□□□□ -0.8
ERCC3-205ENST00000460485 WFDC9Q8NEX5 89 aa10.08□□□□□ -0.8
ERCC3-205ENST00000460485 ZNF479Q96JC4 524 aa10.08□□□□□ -0.8
ERCC3-205ENST00000460485 WFDC10AQ9H1F0 79 aa10.08□□□□□ -0.8
ERCC3-205ENST00000460485 SPANXB1Q9NS25 103 aaPredicted RBP10.08□□□□□ -0.8
ERCC3-205ENST00000460485 TMEM223A0PJW6 202 aa10.07□□□□□ -0.8
ERCC3-205ENST00000460485 C9orf118A6NHY6 69 aa10.07□□□□□ -0.8
ERCC3-205ENST00000460485 GCSHP23434 173 aa10.07□□□□□ -0.8
ERCC3-205ENST00000460485 TCTAP57738 103 aa10.07□□□□□ -0.8
ERCC3-205ENST00000460485 SCGB1D4Q6XE38 83 aa10.07□□□□□ -0.8
ERCC3-205ENST00000460485 FAM19A3Q7Z5A8 133 aa10.07□□□□□ -0.8
ERCC3-205ENST00000460485 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms