RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TRAV13-1A0A0B4J241 112 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 EPM2AB3EWF7 344 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 CCL24O00175 119 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 PMAIP1Q13794 54 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 DCANP1Q8TF63 244 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 AGPAT4-IT1Q9H0P7 198 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 ZNF492Q9P255 531 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 H7C1H1 209 aa7.74□□□□□ -1.17
HERC4-207ENST00000460168 RPP21Q9H633 154 aaKnown RBP7.74□□□□□ -1.17
HERC4-207ENST00000460168 C2CD3Q4AC94 2353 aa7.74□□□□□ -1.17
HERC4-207ENST00000460168 TRAV2A0A0B4J234 112 aa7.74□□□□□ -1.17
HERC4-207ENST00000460168 C19orf71A6NCJ1 209 aa7.74□□□□□ -1.17
HERC4-207ENST00000460168 SCGB1C2P0DMR2 95 aa7.74□□□□□ -1.17
HERC4-207ENST00000460168 AMN1Q8IY45 258 aa7.74□□□□□ -1.17
HERC4-207ENST00000460168 CHAC1Q9BUX1 264 aa7.74□□□□□ -1.17
HERC4-207ENST00000460168 NIPBLQ6KC79 2804 aaeCLIP7.74□□□□□ -1.17
HERC4-207ENST00000460168 IZUMO1RA6ND01 250 aa7.73□□□□□ -1.17
HERC4-207ENST00000460168 SNRPD3P62318 126 aaKnown RBP7.73□□□□□ -1.17
HERC4-207ENST00000460168 DYNLRB2Q8TF09 96 aa7.73□□□□□ -1.17
HERC4-207ENST00000460168 TMEM158Q8WZ71 300 aa7.73□□□□□ -1.17
HERC4-207ENST00000460168 WNK1Q9H4A3 2382 aa7.73□□□□□ -1.17
HERC4-207ENST00000460168 SMIM27A0A1W2PRY6 76 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 HLA-DRB4P13762 266 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 ZNF138P52744 262 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 NSUN5P1Q3KNT7 163 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 C9orf47Q6ZRZ4 202 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 LINC01561Q8N1V8 128 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 ZMAT4Q9H898 229 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 HHLA3Q9XRX5 114 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 HLA-DRB4X5D2U9 266 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 SPINK4O60575 86 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 DEFB1P60022 68 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 DSCR8Q96T75 97 aa7.72□□□□□ -1.17
HERC4-207ENST00000460168 HIGD1CA8MV81 97 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 F6UB75 175 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 P0DMU3 169 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 FAM231AP0DMU4 169 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 FAM231CP0DMU5 169 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 CRIP1P50238 77 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 LGALS9BQ3B8N2 356 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 LGALS9CQ6DKI2 356 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 LINC00482Q8N8I6 264 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 LINC01600Q96MT4 127 aa7.71□□□□□ -1.17
HERC4-207ENST00000460168 TRAV8-4A0A0B4J246 113 aa7.71□□□□□ -1.18
HERC4-207ENST00000460168 K7EQG2 157 aa7.71□□□□□ -1.18
HERC4-207ENST00000460168 SH2D1AO60880 128 aa7.71□□□□□ -1.18
HERC4-207ENST00000460168 COX8CQ7Z4L0 72 aa7.71□□□□□ -1.18
HERC4-207ENST00000460168 OR8A1Q8NGG7 326 aa7.71□□□□□ -1.18
HERC4-207ENST00000460168 FAM240AA0A1B0GVK7 77 aa7.7□□□□□ -1.18
HERC4-207ENST00000460168 IGKCP01834 107 aa7.7□□□□□ -1.18
HERC4-207ENST00000460168 JMJD1CQ15652 2540 aa7.7□□□□□ -1.18
HERC4-207ENST00000460168 ZNF80P51504 273 aaPredicted RBP7.7□□□□□ -1.18
HERC4-207ENST00000460168 PCP2Q8IVA1 136 aa7.7□□□□□ -1.18
HERC4-207ENST00000460168 TMEM61Q8N0U2 210 aa7.7□□□□□ -1.18
HERC4-207ENST00000460168 ZNF747Q9BV97 191 aa7.7□□□□□ -1.18
HERC4-207ENST00000460168 LENEPQ9Y5L5 61 aa7.7□□□□□ -1.18
HERC4-207ENST00000460168 TRGV11A0A075B6L2 103 aa7.69□□□□□ -1.18
HERC4-207ENST00000460168 ADARB2-AS1A8MUL3 147 aa7.69□□□□□ -1.18
HERC4-207ENST00000460168 UBE2D3P61077 147 aa7.69□□□□□ -1.18
HERC4-207ENST00000460168 UBE2D2P62837 147 aa7.69□□□□□ -1.18
HERC4-207ENST00000460168 NDUFA11Q86Y39 141 aa7.69□□□□□ -1.18
HERC4-207ENST00000460168 GFRA4Q9GZZ7 299 aa7.69□□□□□ -1.18
HERC4-207ENST00000460168 TMSB15BA0A087X1C1 80 aa7.68□□□□□ -1.18
HERC4-207ENST00000460168 A0A0U1RQV1 116 aa7.68□□□□□ -1.18
HERC4-207ENST00000460168 CYSRT1A8MQ03 144 aa7.68□□□□□ -1.18
HERC4-207ENST00000460168 TCL1BO95988 128 aa7.68□□□□□ -1.18
HERC4-207ENST00000460168 RPL13AP40429 203 aaKnown RBP7.68□□□□□ -1.18
HERC4-207ENST00000460168 KRTAP10-3P60369 221 aa7.68□□□□□ -1.18
HERC4-207ENST00000460168 DEFB114Q30KQ6 69 aa7.68□□□□□ -1.18
HERC4-207ENST00000460168 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.68□□□□□ -1.18
HERC4-207ENST00000460168 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
HERC4-207ENST00000460168 hADV29S1A0JD25 119 aa7.67□□□□□ -1.18
HERC4-207ENST00000460168 GDF5OSQ5U4N7 250 aa7.67□□□□□ -1.18
HERC4-207ENST00000460168 SORL1Q92673 2214 aa7.67□□□□□ -1.18
HERC4-207ENST00000460168 NDUFC2-KCTD14E9PQ53 114 aa7.67□□□□□ -1.18
HERC4-207ENST00000460168 PSMB2P49721 201 aa7.67□□□□□ -1.18
HERC4-207ENST00000460168 TRAV12-2A0A075B6T6 113 aa7.66□□□□□ -1.18
HERC4-207ENST00000460168 A0A0J9YX75 114 aa7.66□□□□□ -1.18
HERC4-207ENST00000460168 ATP5L2Q7Z4Y8 100 aa7.66□□□□□ -1.18
HERC4-207ENST00000460168 ZFAND2AQ8N6M9 145 aa7.66□□□□□ -1.18
HERC4-207ENST00000460168 NEXN-AS1Q8NBZ9 246 aa7.66□□□□□ -1.18
HERC4-207ENST00000460168 ZNF256Q9Y2P7 627 aaPredicted RBP7.66□□□□□ -1.18
HERC4-207ENST00000460168 TEP1Q99973 2627 aaKnown RBP7.66□□□□□ -1.18
HERC4-207ENST00000460168 IGKV3-20P01619 116 aa7.66□□□□□ -1.18
HERC4-207ENST00000460168 DEFB131AP59861 70 aa7.66□□□□□ -1.18
HERC4-207ENST00000460168 PRR9Q5T870 116 aa7.66□□□□□ -1.18
HERC4-207ENST00000460168 DPH3P1Q9H4G8 78 aa7.66□□□□□ -1.18
HERC4-207ENST00000460168 TRBV25-1A0A075B6N4 114 aa7.65□□□□□ -1.18
HERC4-207ENST00000460168 TRAV26-2A0A0B4J265 109 aa7.65□□□□□ -1.18
HERC4-207ENST00000460168 MYMXA0A1B0GTQ4 84 aa7.65□□□□□ -1.18
HERC4-207ENST00000460168 HBBP68871 147 aa7.65□□□□□ -1.18
HERC4-207ENST00000460168 Q8N1Y9 231 aa7.65□□□□□ -1.18
HERC4-207ENST00000460168 TRAV21A0A0B4J279 112 aa7.64□□□□□ -1.19
HERC4-207ENST00000460168 RNASE4P34096 147 aaKnown RBP7.64□□□□□ -1.19
HERC4-207ENST00000460168 CEMP1Q6PRD7 247 aaPredicted RBP7.64□□□□□ -1.19
HERC4-207ENST00000460168 GTSCR1Q86UQ5 136 aa7.64□□□□□ -1.19
HERC4-207ENST00000460168 TENM1Q9UKZ4 2725 aa7.64□□□□□ -1.19
HERC4-207ENST00000460168 A0A1B0GUT8 65 aa7.64□□□□□ -1.19
HERC4-207ENST00000460168 ATOX1O00244 68 aa7.64□□□□□ -1.19
HERC4-207ENST00000460168 NPYP01303 97 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms