RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 BTF3L4Q96K17 158 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 WFDC10AQ9H1F0 79 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 PRO1933Q9H354 126 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 EDA2RQ9HAV5 297 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 IGHV3OR16-9A0A0B4J2B5 98 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 GRIFINA4D1Z8 144 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 HIGD1CA8MV81 97 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 GNRH2O43555 120 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 SPINK4O60575 86 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 AMBPP02760 352 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 GIG44P09565 113 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 FXYD7P58549 80 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 FABP9Q0Z7S8 132 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 TDRG1Q3Y452 100 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 COA6Q5JTJ3 125 aaKnown RBP3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 LYZL1Q6UWQ5 148 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 LINC00173Q6ZV60 143 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 GTSCR1Q86UQ5 136 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 NAT8BQ9UHF3 227 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 TENM3Q9P273 2699 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 IGLV8-61A0A075B6I0 122 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 A0A1B0GUT8 65 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 A0A1B0GXF2 115 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 F2Z2F3 143 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 CCL25O15444 150 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 RPS10P46783 165 aaKnown RBP3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 CRYBA4P53673 196 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 KRTAP10-11P60412 298 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 CXCL6P80162 114 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 EGFEM1PQ0D2K5 195 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 RBMY1FQ15415 496 aaKnown RBP3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 TTC32Q5I0X7 151 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 MRPL54Q6P161 138 aaKnown RBP3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 FER1L6-AS1Q8NA97 138 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 KCNS1Q96KK3 526 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 MUC21A0A0G2JKD1 596 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 MUC21A0A140T8X8 626 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 PHOX2AO14813 284 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 INSP01308 110 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 ARMS2P0C7Q2 107 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 RNASE3P12724 160 aaKnown RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 CTRLP40313 264 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 ASIPP42127 132 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 PSMB2P49721 201 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 NANOS2P60321 138 aaKnown RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 PRR3P79522 188 aaKnown RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 REG3AQ06141 175 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 MORN3Q6PF18 240 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 RASL11AQ6T310 242 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 ZNF493Q6ZR52 646 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 TMEM136Q6ZRR5 245 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 ATP5L2Q7Z4Y8 100 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 FAM19A5Q7Z5A7 132 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 C1orf158Q8N1D5 194 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 LINC01587Q99440 93 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 LINC00467Q9BRT7 94 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 GNB1LQ9BYB4 327 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 CNFNQ9BYD5 112 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 MAP1LC3AQ9H492 121 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 SCRT2Q9NQ03 307 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 MDFICQ9P1T7 246 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 TP53TG3Q9ULZ0 132 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 TP53TG1Q9Y2A0 90 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 NACAE9PAV3 2078 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 TRAV8-6A0A0B4J262 113 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 H0Y9J4 135 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 H3BVH4 76 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 TRGC2P03986 189 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 PRM2P04554 102 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 HTN1P15515 57 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 NTF3P20783 257 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 S100A4P26447 101 aaKnown RBP3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 RIPPLY3P57055 190 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 RAB5BP61020 215 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 HBBP68871 147 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 C4orf26Q17RF5 130 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 TMEM256Q8N2U0 113 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 C11orf72Q8NBR9 251 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 OR10AG1Q8NH19 301 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 BORCS7Q96B45 105 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 TRAPPC1Q9Y5R8 145 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 STAB2Q8WWQ8 2551 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 DNHD1Q96M86 4753 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 LOC102724200A0A096LPH7 203 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 C1orf196B1AJZ1 125 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 HLA-DQA1P01909 254 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 APCSP02743 223 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 MT-ND6P03923 174 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 CHTF8P0CG12 524 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 AZU1P20160 251 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 RPL36AP83881 106 aaKnown RBP3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 SPANXN1Q5VSR9 72 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 ZNF705AQ6ZN79 300 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 ZNF664Q8N3J9 261 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 GATD1Q8NB37 220 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 FRZBQ92765 325 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 RNF185Q96GF1 192 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 PHLDA3Q9Y5J5 127 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms