RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 IGHV3-49A0A0A0MS15 119 aa10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 LST1O00453 97 aa10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 PRSS2P07478 247 aa10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 EDN2P20800 178 aa10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 JPT2Q9H910 190 aa10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 CXCL5P42830 114 aa10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 C5orf38Q86SI9 138 aa10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 UTP20O75691 2785 aaKnown RBP10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 IGHV3-64A0A075B6Q5 118 aa10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 RHOHQ15669 191 aa10.04□□□□□ -0.8
SYNGAP1-204ENST00000449372 MALP21145 153 aa10.03□□□□□ -0.8
SYNGAP1-204ENST00000449372 SAA4P35542 130 aa10.03□□□□□ -0.8
SYNGAP1-204ENST00000449372 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
SYNGAP1-204ENST00000449372 CRYBG3Q68DQ2 2970 aa10.03□□□□□ -0.8
SYNGAP1-204ENST00000449372 IGIPA6NJ69 53 aa10.02□□□□□ -0.8
SYNGAP1-204ENST00000449372 USP24Q9UPU5 2620 aa10.02□□□□□ -0.81
SYNGAP1-204ENST00000449372 IGHV4OR15-8A0A075B7B6 117 aa10.02□□□□□ -0.81
SYNGAP1-204ENST00000449372 A0A087WW49 117 aa10.02□□□□□ -0.81
SYNGAP1-204ENST00000449372 LEPROTO15243 131 aa10.02□□□□□ -0.81
SYNGAP1-204ENST00000449372 TRAV13-1A0A0B4J241 112 aa10.02□□□□□ -0.81
SYNGAP1-204ENST00000449372 RNF152Q8N8N0 203 aa10.02□□□□□ -0.81
SYNGAP1-204ENST00000449372 FAM19A4Q96LR4 140 aa10.02□□□□□ -0.81
SYNGAP1-204ENST00000449372 FBN2P35556 2912 aa10.02□□□□□ -0.81
SYNGAP1-204ENST00000449372 CLPSL1A2RUU4 121 aa10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 UBR5O95071 2799 aaPredicted RBP10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 RNF223E7ERA6 249 aa10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 C10orf105Q8TEF2 133 aa10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 NSUN5P1Q3KNT7 163 aa10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 DOPEY2Q9Y3R5 2298 aa10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 DOPEY1Q5JWR5 2465 aa10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 I3L3M4 83 aa10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 Q6ZSV7 163 aa10.01□□□□□ -0.81
SYNGAP1-204ENST00000449372 G3V318 75 aa10□□□□□ -0.81
SYNGAP1-204ENST00000449372 ZNF876PQ49A33 203 aa10□□□□□ -0.81
SYNGAP1-204ENST00000449372 USP9XQ93008 2570 aaPredicted RBP10□□□□□ -0.81
SYNGAP1-204ENST00000449372 IGHV4-61A0A0C4DH41 118 aa10□□□□□ -0.81
SYNGAP1-204ENST00000449372 ZFAND2AQ8N6M9 145 aa10□□□□□ -0.81
SYNGAP1-204ENST00000449372 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
SYNGAP1-204ENST00000449372 C5orf56Q8N8D9 126 aa10□□□□□ -0.81
SYNGAP1-204ENST00000449372 IGHV1-69P01742 117 aa9.99□□□□□ -0.81
SYNGAP1-204ENST00000449372 DCANP1Q8TF63 244 aa9.99□□□□□ -0.81
SYNGAP1-204ENST00000449372 PEMTQ9UBM1 199 aa9.99□□□□□ -0.81
SYNGAP1-204ENST00000449372 A0A0J9YXY3 114 aa9.99□□□□□ -0.81
SYNGAP1-204ENST00000449372 COPS9Q8WXC6 57 aa9.99□□□□□ -0.81
SYNGAP1-204ENST00000449372 RS1O15537 224 aa9.99□□□□□ -0.81
SYNGAP1-204ENST00000449372 SNRPD3P62318 126 aaKnown RBP9.99□□□□□ -0.81
SYNGAP1-204ENST00000449372 HIST1H4AP62805 103 aaKnown RBP9.98□□□□□ -0.81
SYNGAP1-204ENST00000449372 BBC3Q96PG8 261 aaPredicted RBP9.98□□□□□ -0.81
SYNGAP1-204ENST00000449372 DAZ1Q9NQZ3 744 aaKnown RBP9.98□□□□□ -0.81
SYNGAP1-204ENST00000449372 C19orf54Q5BKX5 351 aa9.98□□□□□ -0.81
SYNGAP1-204ENST00000449372 CCL19Q99731 98 aa9.98□□□□□ -0.81
SYNGAP1-204ENST00000449372 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
SYNGAP1-204ENST00000449372 TRBV6-5A0A0K0K1A5 114 aa9.98□□□□□ -0.81
SYNGAP1-204ENST00000449372 SDHAF1A6NFY7 115 aa9.98□□□□□ -0.81
SYNGAP1-204ENST00000449372 NXPH4O95158 308 aa9.98□□□□□ -0.81
SYNGAP1-204ENST00000449372 ADARB2-AS1A8MUL3 147 aa9.97□□□□□ -0.81
SYNGAP1-204ENST00000449372 WNK2Q9Y3S1 2297 aa9.97□□□□□ -0.81
SYNGAP1-204ENST00000449372 PFN2P35080 140 aa9.97□□□□□ -0.81
SYNGAP1-204ENST00000449372 NPC2P61916 151 aa9.97□□□□□ -0.81
SYNGAP1-204ENST00000449372 SDIM1Q6ZPB5 146 aa9.97□□□□□ -0.81
SYNGAP1-204ENST00000449372 TRAV12-3A0A0B4J271 114 aa9.96□□□□□ -0.81
SYNGAP1-204ENST00000449372 RPL18AQ02543 176 aaKnown RBP9.96□□□□□ -0.81
SYNGAP1-204ENST00000449372 RHPN1-AS1Q9BWJ2 59 aa9.96□□□□□ -0.81
SYNGAP1-204ENST00000449372 GPHB5Q86YW7 130 aa9.96□□□□□ -0.82
SYNGAP1-204ENST00000449372 K7EMT4 169 aa9.96□□□□□ -0.82
SYNGAP1-204ENST00000449372 APRG1Q8IVJ8 170 aa9.96□□□□□ -0.82
SYNGAP1-204ENST00000449372 SERP2Q8N6R1 65 aa9.96□□□□□ -0.82
SYNGAP1-204ENST00000449372 IGHV4-30-2A0A087WSY4 118 aa9.95□□□□□ -0.82
SYNGAP1-204ENST00000449372 A0A0J9YX75 114 aa9.95□□□□□ -0.82
SYNGAP1-204ENST00000449372 ZNF580Q9UK33 172 aa9.95□□□□□ -0.82
SYNGAP1-204ENST00000449372 POLR2KP53803 58 aaKnown RBP9.94□□□□□ -0.82
SYNGAP1-204ENST00000449372 DAZ2Q13117 558 aaKnown RBP9.94□□□□□ -0.82
SYNGAP1-204ENST00000449372 SUMO4Q6EEV6 95 aa9.94□□□□□ -0.82
SYNGAP1-204ENST00000449372 DAZ4Q86SG3 579 aaKnown RBP9.94□□□□□ -0.82
SYNGAP1-204ENST00000449372 DAZ3Q9NR90 486 aaKnown RBP9.94□□□□□ -0.82
SYNGAP1-204ENST00000449372 TRBV27A0A0K0K1C4 114 aa9.94□□□□□ -0.82
SYNGAP1-204ENST00000449372 PRB1P04280 392 aa9.94□□□□□ -0.82
SYNGAP1-204ENST00000449372 OPRPNQ99935 248 aaPredicted RBP9.94□□□□□ -0.82
SYNGAP1-204ENST00000449372 UPK3BQ9BT76 320 aa9.94□□□□□ -0.82
SYNGAP1-204ENST00000449372 IGF1P05019 195 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 ADAMTSL4-AS1Q5T5F5 129 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 ACACBO00763 2458 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 A0A096LNT2 108 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 FAM74A4Q5TZK3 123 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 LITAFQ99732 161 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 MED13LQ71F56 2210 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 FAM236DA0A1B0GTK5 79 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 GNRH2O43555 120 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 FAM236CP0DP71 79 aa9.93□□□□□ -0.82
SYNGAP1-204ENST00000449372 LINC00336Q6ZUF6 198 aa9.92□□□□□ -0.82
SYNGAP1-204ENST00000449372 C1orf195Q5TG92 126 aa9.92□□□□□ -0.82
SYNGAP1-204ENST00000449372 TMEM61Q8N0U2 210 aa9.92□□□□□ -0.82
SYNGAP1-204ENST00000449372 C20orf173Q96LM9 149 aa9.92□□□□□ -0.82
SYNGAP1-204ENST00000449372 CIRBPQ14011 172 aaKnown RBP9.92□□□□□ -0.82
SYNGAP1-204ENST00000449372 PRR9Q5T870 116 aa9.92□□□□□ -0.82
SYNGAP1-204ENST00000449372 NACAE9PAV3 2078 aa9.92□□□□□ -0.82
SYNGAP1-204ENST00000449372 AKAP6Q13023 2319 aa9.92□□□□□ -0.82
SYNGAP1-204ENST00000449372 IGKV3-7A0A075B6H7 116 aa9.91□□□□□ -0.82
SYNGAP1-204ENST00000449372 IGHV4-38-2P0DP08 117 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms