RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 A0A1B0GXF2 115 aa6.92□□□□□ -1.3
NIPBL-202ENST00000448238 SPINK6Q6UWN8 80 aa6.92□□□□□ -1.3
NIPBL-202ENST00000448238 Q6ZQY7 126 aa6.92□□□□□ -1.3
NIPBL-202ENST00000448238 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
NIPBL-202ENST00000448238 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 LINC00694P0DN24 101 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 Q6Q795 121 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 WFDC13Q8IUB5 93 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 CTRLP40313 264 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 Q8TCH9 128 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 A0A096LNI7 61 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 C4orf51C9J302 202 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 MUC6Q6W4X9 2439 aa6.91□□□□□ -1.3
NIPBL-202ENST00000448238 Q8NFD4 153 aa6.9□□□□□ -1.3
NIPBL-202ENST00000448238 A0A0G2JRQ6 117 aa6.9□□□□□ -1.3
NIPBL-202ENST00000448238 X6R8D5 127 aa6.9□□□□□ -1.3
NIPBL-202ENST00000448238 ALPK3Q96L96 1907 aa6.9□□□□□ -1.3
NIPBL-202ENST00000448238 INSL3P51460 131 aa6.9□□□□□ -1.3
NIPBL-202ENST00000448238 RPL39P62891 51 aaKnown RBP6.9□□□□□ -1.3
NIPBL-202ENST00000448238 QRFPP83859 136 aa6.9□□□□□ -1.3
NIPBL-202ENST00000448238 ESM1Q9NQ30 184 aa6.9□□□□□ -1.3
NIPBL-202ENST00000448238 C2orf70A6NJV1 201 aa6.9□□□□□ -1.3
NIPBL-202ENST00000448238 LYPD2Q6UXB3 125 aa6.9□□□□□ -1.31
NIPBL-202ENST00000448238 NFE4Q86UQ8 179 aa6.9□□□□□ -1.31
NIPBL-202ENST00000448238 WT1-ASQ06250 92 aa6.9□□□□□ -1.31
NIPBL-202ENST00000448238 RUSC1-AS1Q66K80 236 aa6.9□□□□□ -1.31
NIPBL-202ENST00000448238 LINC00322Q6ZN03 302 aaPredicted RBP6.9□□□□□ -1.31
NIPBL-202ENST00000448238 Q96MF0 132 aa6.9□□□□□ -1.31
NIPBL-202ENST00000448238 LINC00474Q9P2X8 69 aa6.9□□□□□ -1.31
NIPBL-202ENST00000448238 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 ODF3L1Q8IXM7 274 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 K7EN84 100 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 COL8A2P25067 703 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 SHANK3Q9BYB0 1731 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 TGFBR3LH3BV60 316 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 PSPHP1O15172 72 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 LY6DQ14210 128 aa6.89□□□□□ -1.31
NIPBL-202ENST00000448238 ZNF726P1Q15940 193 aa6.88□□□□□ -1.31
NIPBL-202ENST00000448238 ZFAND2AQ8N6M9 145 aa6.88□□□□□ -1.31
NIPBL-202ENST00000448238 NCOR2Q9Y618 2525 aa6.88□□□□□ -1.31
NIPBL-202ENST00000448238 FAM30AQ9NZY2 134 aa6.88□□□□□ -1.31
NIPBL-202ENST00000448238 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
NIPBL-202ENST00000448238 COX17Q14061 63 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 SMAD5-AS1Q9Y6J3 95 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 TRBV6-1A0A0K0K1D8 114 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 hDV103S1A0JD37 113 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 FAM19A5Q7Z5A7 132 aaPredicted RBP6.87□□□□□ -1.31
NIPBL-202ENST00000448238 PYGO1Q9Y3Y4 419 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 LRP4O75096 1905 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 E7EQL1 145 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 PTPRSQ13332 1948 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 ARTNQ5T4W7 220 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 C20orf203Q8NBC4 194 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 KAAG1Q9UBP8 84 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 REG3AQ06141 175 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 Q6JHZ5 121 aa6.87□□□□□ -1.31
NIPBL-202ENST00000448238 LINC01548A6NM66 108 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 C5orf56Q8N8D9 126 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 ITGBL1O95965 494 aaPredicted RBP6.86□□□□□ -1.31
NIPBL-202ENST00000448238 IGKV1-17P01599 117 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 TRBV10-3A0A0K0K1G6 114 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 SOSTDC1Q6X4U4 206 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 TRBV7-7A0A0K0K1E9 115 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.86□□□□□ -1.31
NIPBL-202ENST00000448238 IGLV3-19P01714 112 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 LINC00205P59089 165 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 Q6ZS92 163 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 SIRPDQ9H106 197 aa6.86□□□□□ -1.31
NIPBL-202ENST00000448238 ESRGQ1W209 222 aa6.85□□□□□ -1.31
NIPBL-202ENST00000448238 NAV2Q8IVL1 2488 aa6.85□□□□□ -1.31
NIPBL-202ENST00000448238 PRORYQ9H606 182 aa6.85□□□□□ -1.31
NIPBL-202ENST00000448238 K7EMT4 169 aa6.85□□□□□ -1.31
NIPBL-202ENST00000448238 NRXN2Q9P2S2 1712 aa6.85□□□□□ -1.31
NIPBL-202ENST00000448238 TDRG1Q3Y452 100 aa6.85□□□□□ -1.31
NIPBL-202ENST00000448238 LY6LH3BQJ8 138 aa6.84□□□□□ -1.31
NIPBL-202ENST00000448238 LINC00269Q8N2A0 174 aa6.84□□□□□ -1.31
NIPBL-202ENST00000448238 C11orf45Q8TAV5 145 aa6.84□□□□□ -1.31
NIPBL-202ENST00000448238 FNDC1Q4ZHG4 1894 aaPredicted RBP6.84□□□□□ -1.31
NIPBL-202ENST00000448238 CCDC179H3BU77 68 aa6.84□□□□□ -1.31
NIPBL-202ENST00000448238 TRIAP1O43715 76 aa6.84□□□□□ -1.31
NIPBL-202ENST00000448238 LINC00308Q8TCZ7 52 aa6.84□□□□□ -1.31
NIPBL-202ENST00000448238 TRBV6-5A0A0K0K1A5 114 aa6.84□□□□□ -1.32
NIPBL-202ENST00000448238 ADAMTS7Q9UKP4 1686 aa6.83□□□□□ -1.32
NIPBL-202ENST00000448238 C17orf58Q2M2W7 97 aa6.83□□□□□ -1.32
NIPBL-202ENST00000448238 C6orf99Q4VX62 202 aa6.83□□□□□ -1.32
NIPBL-202ENST00000448238 LINC00526Q96FQ7 95 aa6.83□□□□□ -1.32
NIPBL-202ENST00000448238 M0R378 163 aa6.83□□□□□ -1.32
NIPBL-202ENST00000448238 A0A1B0GU69 56 aa6.83□□□□□ -1.32
NIPBL-202ENST00000448238 THSD7AQ9UPZ6 1657 aa6.83□□□□□ -1.32
NIPBL-202ENST00000448238 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.83□□□□□ -1.32
NIPBL-202ENST00000448238 XAGE1AQ9HD64 81 aa6.83□□□□□ -1.32
NIPBL-202ENST00000448238 A6NDX4 124 aa6.83□□□□□ -1.32
NIPBL-202ENST00000448238 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
NIPBL-202ENST00000448238 TMEM89A2RUT3 159 aa6.82□□□□□ -1.32
NIPBL-202ENST00000448238 DEFB135Q30KP9 77 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms