RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 C19orf71A6NCJ1 209 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 PRSS1P07477 247 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 OR5AL1P0C617 328 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 MEF2BQ02080 365 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-203ENST00000447360 CENPWQ5EE01 88 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 FAM74A4Q5TZK3 123 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 PRR27Q6MZM9 219 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 WDR73Q6P4I2 378 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 KCNIP4Q6PIL6 250 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 ZFP82Q8N141 532 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 KIF25-AS1Q9Y6Z4 181 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 TEX46H3BTG2 121 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 RHODO00212 210 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 PDE6DO43924 150 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 IGLC6P0CF74 106 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 GZMBP10144 247 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 BCL2P10415 239 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 UBE2D3P61077 147 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 UBE2D2P62837 147 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 LYPD6BQ8NI32 183 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 C7orf33Q8WU49 177 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 MED9Q9NWA0 146 aa4.48□□□□□ -1.69
LRRC28-203ENST00000447360 TRBV7-3A0A075B6L6 115 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 A0A087WYN8 130 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 TRBV10-1A0A0K0K1A3 114 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 PHOX2AO14813 284 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 GNG4P50150 75 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 RAB4BP61018 213 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 SSTP61278 116 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 ENHOQ6UWT2 76 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 NEXN-AS1Q8NBZ9 246 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 OR10G8Q8NGN5 311 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 OCC1Q8TAD7 63 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 SMIM12Q96EX1 92 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 DPH3Q96FX2 82 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 VAX2Q9UIW0 290 aa4.47□□□□□ -1.69
LRRC28-203ENST00000447360 K7EN84 100 aa4.46□□□□□ -1.7
LRRC28-203ENST00000447360 IFNA1P01562 189 aa4.46□□□□□ -1.7
LRRC28-203ENST00000447360 CRPP02741 224 aa4.46□□□□□ -1.7
LRRC28-203ENST00000447360 NKX2-5P52952 324 aaPredicted RBP4.46□□□□□ -1.7
LRRC28-203ENST00000447360 CNBPP62633 177 aaKnown RBP4.46□□□□□ -1.7
LRRC28-203ENST00000447360 RPL36AP83881 106 aaKnown RBP4.46□□□□□ -1.7
LRRC28-203ENST00000447360 SPANXN1Q5VSR9 72 aa4.46□□□□□ -1.7
LRRC28-203ENST00000447360 SPINK6Q6UWN8 80 aa4.46□□□□□ -1.7
LRRC28-203ENST00000447360 ALKAL2Q6UX46 152 aa4.46□□□□□ -1.7
LRRC28-203ENST00000447360 OR2D3Q8NGH3 330 aa4.46□□□□□ -1.7
LRRC28-203ENST00000447360 SPACA4Q8TDM5 124 aa4.46□□□□□ -1.7
LRRC28-203ENST00000447360 RPL36ALQ969Q0 106 aaKnown RBP4.46□□□□□ -1.7
LRRC28-203ENST00000447360 PLAC8Q9NZF1 115 aa4.46□□□□□ -1.7
LRRC28-203ENST00000447360 IGHV3-64A0A075B6Q5 118 aa4.45□□□□□ -1.7
LRRC28-203ENST00000447360 VCYO14598 125 aa4.45□□□□□ -1.7
LRRC28-203ENST00000447360 HLA-DQA1P01909 254 aa4.45□□□□□ -1.7
LRRC28-203ENST00000447360 TAGLN2P37802 199 aaKnown RBP4.45□□□□□ -1.7
LRRC28-203ENST00000447360 RPS20P60866 119 aaKnown RBP4.45□□□□□ -1.7
LRRC28-203ENST00000447360 PRR3P79522 188 aaKnown RBP4.45□□□□□ -1.7
LRRC28-203ENST00000447360 MIAQ16674 131 aa4.45□□□□□ -1.7
LRRC28-203ENST00000447360 LYZL1Q6UWQ5 148 aa4.45□□□□□ -1.7
LRRC28-203ENST00000447360 NTM-AS1Q6ZSK4 140 aa4.45□□□□□ -1.7
LRRC28-203ENST00000447360 FER1L6-AS1Q8NA97 138 aa4.45□□□□□ -1.7
LRRC28-203ENST00000447360 RNASE7Q9H1E1 156 aaKnown RBP4.45□□□□□ -1.7
LRRC28-203ENST00000447360 TRBV6-8A0A0A6YYG3 113 aa4.44□□□□□ -1.7
LRRC28-203ENST00000447360 TMEM262E9PQX1 116 aa4.44□□□□□ -1.7
LRRC28-203ENST00000447360 F2Z2F3 143 aa4.44□□□□□ -1.7
LRRC28-203ENST00000447360 M0QY20 66 aa4.44□□□□□ -1.7
LRRC28-203ENST00000447360 P01737 135 aa4.44□□□□□ -1.7
LRRC28-203ENST00000447360 NTF3P20783 257 aa4.44□□□□□ -1.7
LRRC28-203ENST00000447360 ZNF56Q15929 161 aa4.44□□□□□ -1.7
LRRC28-203ENST00000447360 TPPP3Q9BW30 176 aa4.44□□□□□ -1.7
LRRC28-203ENST00000447360 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-203ENST00000447360 C5orf52A6NGY3 159 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 TMEM250H0YL14 139 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 ANGP03950 147 aaKnown RBP4.43□□□□□ -1.7
LRRC28-203ENST00000447360 CHTF8P0CG12 524 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 CACNG7P62955 275 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 SUMO4Q6EEV6 95 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 C15orf54Q8N8G6 183 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 GTSF1Q8WW33 167 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 AP1S3Q96PC3 154 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 CNFNQ9BYD5 112 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 BIN3Q9NQY0 253 aa4.43□□□□□ -1.7
LRRC28-203ENST00000447360 XKRY2A2RUG3 117 aa4.42□□□□□ -1.7
LRRC28-203ENST00000447360 NDUFS6O75380 124 aaKnown RBP4.42□□□□□ -1.7
LRRC28-203ENST00000447360 SRP19P09132 144 aaKnown RBP4.42□□□□□ -1.7
LRRC28-203ENST00000447360 SMIM17P0DL12 118 aa4.42□□□□□ -1.7
LRRC28-203ENST00000447360 CTRLP40313 264 aa4.42□□□□□ -1.7
LRRC28-203ENST00000447360 FOXA3P55318 350 aaPredicted RBP4.42□□□□□ -1.7
LRRC28-203ENST00000447360 PKIAP61925 76 aa4.42□□□□□ -1.7
LRRC28-203ENST00000447360 SRSF9Q13242 221 aaKnown RBP eCLIP4.42□□□□□ -1.7
LRRC28-203ENST00000447360 MPV17L2Q567V2 206 aa4.42□□□□□ -1.7
LRRC28-203ENST00000447360 KRTAP26-1Q6PEX3 210 aa4.42□□□□□ -1.7
LRRC28-203ENST00000447360 FAM231DQ6ZW35 169 aa4.42□□□□□ -1.7
LRRC28-203ENST00000447360 FAM210AQ96ND0 272 aa4.42□□□□□ -1.7
LRRC28-203ENST00000447360 RPP21Q9H633 154 aaKnown RBP4.42□□□□□ -1.7
LRRC28-203ENST00000447360 PRR34Q9NV39 138 aa4.42□□□□□ -1.7
LRRC28-203ENST00000447360 hDV102S1A0JD36 115 aa4.41□□□□□ -1.7
LRRC28-203ENST00000447360 C9JQL5 133 aa4.41□□□□□ -1.7
LRRC28-203ENST00000447360 GATCO43716 136 aaKnown RBP4.41□□□□□ -1.7
LRRC28-203ENST00000447360 MGPP08493 103 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms