RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 FCER1GP30273 86 aa12.31□□□□□ -0.44
TRAPPC4-203ENST00000447216 LGALS9CQ6DKI2 356 aa12.31□□□□□ -0.44
TRAPPC4-203ENST00000447216 Q8N8P6 123 aa12.31□□□□□ -0.44
TRAPPC4-203ENST00000447216 C18orf32Q8TCD1 76 aa12.31□□□□□ -0.44
TRAPPC4-203ENST00000447216 LINC00476Q8WZB0 136 aa12.31□□□□□ -0.44
TRAPPC4-203ENST00000447216 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
TRAPPC4-203ENST00000447216 TRBV25-1A0A075B6N4 114 aa12.3□□□□□ -0.44
TRAPPC4-203ENST00000447216 TRAV8-6A0A0B4J262 113 aa12.3□□□□□ -0.44
TRAPPC4-203ENST00000447216 DNAH6Q9C0G6 4158 aa12.29□□□□□ -0.44
TRAPPC4-203ENST00000447216 PRSS3P2Q8NHM4 247 aa12.29□□□□□ -0.44
TRAPPC4-203ENST00000447216 CHCHD5Q9BSY4 110 aa12.29□□□□□ -0.44
TRAPPC4-203ENST00000447216 TMEM243Q9BU79 118 aa12.29□□□□□ -0.44
TRAPPC4-203ENST00000447216 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
TRAPPC4-203ENST00000447216 NXT2Q9NPJ8 142 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-203ENST00000447216 GAGE6Q13070 117 aa12.28□□□□□ -0.44
TRAPPC4-203ENST00000447216 Q8N3U1 123 aa12.28□□□□□ -0.44
TRAPPC4-203ENST00000447216 UPK3BQ9BT76 320 aa12.28□□□□□ -0.44
TRAPPC4-203ENST00000447216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-203ENST00000447216 IGKV2-29A2NJV5 120 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-203ENST00000447216 SIVA1O15304 175 aa12.26□□□□□ -0.45
TRAPPC4-203ENST00000447216 ESDP10768 282 aa12.26□□□□□ -0.45
TRAPPC4-203ENST00000447216 FA2HQ7L5A8 372 aa12.26□□□□□ -0.45
TRAPPC4-203ENST00000447216 URB1-AS1Q96HZ7 61 aa12.26□□□□□ -0.45
TRAPPC4-203ENST00000447216 Q9H8V8 135 aa12.26□□□□□ -0.45
TRAPPC4-203ENST00000447216 SACSQ9NZJ4 4579 aa12.25□□□□□ -0.45
TRAPPC4-203ENST00000447216 TMEM262E9PQX1 116 aa12.25□□□□□ -0.45
TRAPPC4-203ENST00000447216 IGHV3-30P01768 117 aa12.25□□□□□ -0.45
TRAPPC4-203ENST00000447216 IGHV3-33P01772 117 aa12.25□□□□□ -0.45
TRAPPC4-203ENST00000447216 IGHV3-30-3P0DP02 117 aa12.25□□□□□ -0.45
TRAPPC4-203ENST00000447216 IGHV3-30-5P0DP03 117 aa12.25□□□□□ -0.45
TRAPPC4-203ENST00000447216 NIT1Q86X76 327 aa12.25□□□□□ -0.45
TRAPPC4-203ENST00000447216 UBE2L6O14933 153 aa12.24□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST1H2BKO60814 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST1H2BJP06899 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST1H2BOP23527 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST1H2BBP33778 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST1H2BDP58876 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST1H2BCP62807 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 RPL39P62891 51 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 LAGE3Q14657 143 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST2H2BEQ16778 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 MPV17L2Q567V2 206 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 BAGE3Q86Y29 109 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST1H2BHQ93079 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST1H2BNQ99877 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 HIST1H2BMQ99879 126 aa12.23□□□□□ -0.45
TRAPPC4-203ENST00000447216 LCE6AA0A183 80 aa12.22□□□□□ -0.45
TRAPPC4-203ENST00000447216 LINC01546A6NGU7 62 aa12.22□□□□□ -0.45
TRAPPC4-203ENST00000447216 C1orf196B1AJZ1 125 aa12.22□□□□□ -0.45
TRAPPC4-203ENST00000447216 DNAH10OSP0CZ25 163 aa12.22□□□□□ -0.45
TRAPPC4-203ENST00000447216 Q0VG73 95 aa12.22□□□□□ -0.45
TRAPPC4-203ENST00000447216 C20orf203Q8NBC4 194 aa12.22□□□□□ -0.45
TRAPPC4-203ENST00000447216 HYDINQ4G0P3 5121 aa12.21□□□□□ -0.45
TRAPPC4-203ENST00000447216 A0A087WX48 190 aa12.21□□□□□ -0.45
TRAPPC4-203ENST00000447216 LINC00614P0C842 121 aa12.21□□□□□ -0.45
TRAPPC4-203ENST00000447216 FGF6P10767 208 aa12.21□□□□□ -0.45
TRAPPC4-203ENST00000447216 RBX1P62877 108 aa12.21□□□□□ -0.45
TRAPPC4-203ENST00000447216 ORMDL2Q53FV1 153 aa12.21□□□□□ -0.45
TRAPPC4-203ENST00000447216 LINC01556Q5JQF7 62 aa12.21□□□□□ -0.45
TRAPPC4-203ENST00000447216 Q8N976 141 aa12.21□□□□□ -0.45
TRAPPC4-203ENST00000447216 KMT2AQ03164 3969 aa12.21□□□□□ -0.46
TRAPPC4-203ENST00000447216 RAB5BP61020 215 aa12.2□□□□□ -0.46
TRAPPC4-203ENST00000447216 AP5S1Q9NUS5 200 aa12.2□□□□□ -0.46
TRAPPC4-203ENST00000447216 IGLV4-60A0A075B6I1 120 aa12.19□□□□□ -0.46
TRAPPC4-203ENST00000447216 K7EMI3 77 aa12.19□□□□□ -0.46
TRAPPC4-203ENST00000447216 M0R2N4 97 aa12.19□□□□□ -0.46
TRAPPC4-203ENST00000447216 BTF3P20290 206 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-203ENST00000447216 LINC00310P59036 64 aa12.19□□□□□ -0.46
TRAPPC4-203ENST00000447216 PMCHL1Q16048 86 aa12.19□□□□□ -0.46
TRAPPC4-203ENST00000447216 AMMECR1LQ6DCA0 310 aa12.19□□□□□ -0.46
TRAPPC4-203ENST00000447216 H7C423 109 aa12.18□□□□□ -0.46
TRAPPC4-203ENST00000447216 SERF1AO75920 110 aa12.18□□□□□ -0.46
TRAPPC4-203ENST00000447216 PKIAP61925 76 aa12.18□□□□□ -0.46
TRAPPC4-203ENST00000447216 C2orf66Q6UXQ4 117 aa12.18□□□□□ -0.46
TRAPPC4-203ENST00000447216 TMEM18Q96B42 140 aa12.18□□□□□ -0.46
TRAPPC4-203ENST00000447216 KRTAP1-5Q9BYS1 174 aa12.18□□□□□ -0.46
TRAPPC4-203ENST00000447216 NBDYA0A0U1RRE5 68 aa12.17□□□□□ -0.46
TRAPPC4-203ENST00000447216 KLK12Q9UKR0 248 aa12.17□□□□□ -0.46
TRAPPC4-203ENST00000447216 CYSLTR1Q9Y271 337 aa12.17□□□□□ -0.46
TRAPPC4-203ENST00000447216 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
TRAPPC4-203ENST00000447216 NUPR1O60356 82 aa12.16□□□□□ -0.46
TRAPPC4-203ENST00000447216 ANGP03950 147 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-203ENST00000447216 MRPL52Q86TS9 123 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-203ENST00000447216 CHCHD1Q96BP2 118 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-203ENST00000447216 KMT2CQ8NEZ4 4911 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-203ENST00000447216 A0A096LNJ9 63 aa12.15□□□□□ -0.46
TRAPPC4-203ENST00000447216 A0A1B0GUV1 79 aa12.15□□□□□ -0.46
TRAPPC4-203ENST00000447216 CLPSL2Q6UWE3 100 aa12.15□□□□□ -0.46
TRAPPC4-203ENST00000447216 OR5A1Q8NGJ0 315 aa12.15□□□□□ -0.46
TRAPPC4-203ENST00000447216 NDUFA6P56556 154 aa12.14□□□□□ -0.47
TRAPPC4-203ENST00000447216 RNASE13Q5GAN3 156 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-203ENST00000447216 DGAT2L7PQ6IED9 249 aa12.14□□□□□ -0.47
TRAPPC4-203ENST00000447216 TOMM6Q96B49 74 aa12.14□□□□□ -0.47
TRAPPC4-203ENST00000447216 TMEM101Q96IK0 257 aa12.14□□□□□ -0.47
TRAPPC4-203ENST00000447216 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-203ENST00000447216 TIMM21Q9BVV7 248 aa12.14□□□□□ -0.47
TRAPPC4-203ENST00000447216 RYR2Q92736 4967 aa12.13□□□□□ -0.47
TRAPPC4-203ENST00000447216 TRAV9-2A0A087WT02 112 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms