RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 C15orf53Q8NAA6 179 aa12.04□□□□□ -0.48
HDAC11-214ENST00000446613 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.03□□□□□ -0.48
HDAC11-214ENST00000446613 TRAV8-4A0A0B4J246 113 aa12.03□□□□□ -0.48
HDAC11-214ENST00000446613 H7C423 109 aa12.03□□□□□ -0.48
HDAC11-214ENST00000446613 IGLV1-40P01703 118 aa12.03□□□□□ -0.48
HDAC11-214ENST00000446613 C2orf82Q6UX34 121 aa12.03□□□□□ -0.48
HDAC11-214ENST00000446613 KLRB1Q12918 225 aa12.03□□□□□ -0.48
HDAC11-214ENST00000446613 DUX3Q96PT4 197 aa12.03□□□□□ -0.48
HDAC11-214ENST00000446613 ICOSQ9Y6W8 199 aa12.03□□□□□ -0.48
HDAC11-214ENST00000446613 TRBV10-2A0A0K0K1G8 114 aa12.02□□□□□ -0.48
HDAC11-214ENST00000446613 NDUFA12Q9UI09 145 aa12.02□□□□□ -0.48
HDAC11-214ENST00000446613 A6NDX4 124 aa12.02□□□□□ -0.49
HDAC11-214ENST00000446613 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
HDAC11-214ENST00000446613 H3BMM0 161 aa12.01□□□□□ -0.49
HDAC11-214ENST00000446613 UBE2WQ96B02 151 aa12.01□□□□□ -0.49
HDAC11-214ENST00000446613 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.01□□□□□ -0.49
HDAC11-214ENST00000446613 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
HDAC11-214ENST00000446613 IGKV2-29A2NJV5 120 aaPredicted RBP12.01□□□□□ -0.49
HDAC11-214ENST00000446613 Q6ZSN1 163 aa12.01□□□□□ -0.49
HDAC11-214ENST00000446613 MYO9AB2RTY4 2548 aa12□□□□□ -0.49
HDAC11-214ENST00000446613 A0A0U1RRA0 63 aa12□□□□□ -0.49
HDAC11-214ENST00000446613 AVPP01185 164 aa12□□□□□ -0.49
HDAC11-214ENST00000446613 CFAP46Q8IYW2 2715 aa12□□□□□ -0.49
HDAC11-214ENST00000446613 SYNJ2BPP57105 145 aa12□□□□□ -0.49
HDAC11-214ENST00000446613 IFITM1P13164 125 aa11.99□□□□□ -0.49
HDAC11-214ENST00000446613 LY6DQ14210 128 aa11.99□□□□□ -0.49
HDAC11-214ENST00000446613 MRPS36P82909 103 aaKnown RBP11.99□□□□□ -0.49
HDAC11-214ENST00000446613 NIPBLQ6KC79 2804 aaeCLIP11.99□□□□□ -0.49
HDAC11-214ENST00000446613 M0QXV9 152 aa11.98□□□□□ -0.49
HDAC11-214ENST00000446613 BRI3O95415 125 aa11.98□□□□□ -0.49
HDAC11-214ENST00000446613 SNRPD3P62318 126 aaKnown RBP11.98□□□□□ -0.49
HDAC11-214ENST00000446613 IGHV1-58A0A0C4DH39 117 aa11.98□□□□□ -0.49
HDAC11-214ENST00000446613 H3BUA1 57 aa11.98□□□□□ -0.49
HDAC11-214ENST00000446613 RPL13AP40429 203 aaKnown RBP11.98□□□□□ -0.49
HDAC11-214ENST00000446613 C3orf56Q8N813 242 aa11.98□□□□□ -0.49
HDAC11-214ENST00000446613 ZNF625Q96I27 306 aaPredicted RBP11.98□□□□□ -0.49
HDAC11-214ENST00000446613 CFHR3Q02985 330 aa11.97□□□□□ -0.49
HDAC11-214ENST00000446613 FBN2P35556 2912 aa11.97□□□□□ -0.49
HDAC11-214ENST00000446613 K7EQG2 157 aa11.97□□□□□ -0.49
HDAC11-214ENST00000446613 K7EMT4 169 aa11.97□□□□□ -0.49
HDAC11-214ENST00000446613 VSIG2Q96IQ7 327 aa11.97□□□□□ -0.49
HDAC11-214ENST00000446613 USP9XQ93008 2570 aaPredicted RBP11.96□□□□□ -0.49
HDAC11-214ENST00000446613 GAGE12JA6NER3 117 aa11.96□□□□□ -0.49
HDAC11-214ENST00000446613 GAGE7O76087 117 aa11.96□□□□□ -0.49
HDAC11-214ENST00000446613 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
HDAC11-214ENST00000446613 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
HDAC11-214ENST00000446613 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
HDAC11-214ENST00000446613 NBL1P41271 181 aa11.96□□□□□ -0.49
HDAC11-214ENST00000446613 GAGE4Q13068 117 aa11.96□□□□□ -0.49
HDAC11-214ENST00000446613 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.96□□□□□ -0.49
HDAC11-214ENST00000446613 MIAQ16674 131 aa11.96□□□□□ -0.5
HDAC11-214ENST00000446613 AKAP9Q99996 3911 aa11.95□□□□□ -0.5
HDAC11-214ENST00000446613 PSMB8P28062 276 aa11.95□□□□□ -0.5
HDAC11-214ENST00000446613 CDKN2A-AS1Q9UH64 79 aa11.95□□□□□ -0.5
HDAC11-214ENST00000446613 TNFRSF18Q9Y5U5 241 aa11.95□□□□□ -0.5
HDAC11-214ENST00000446613 IGHV4-30-2A0A087WSY4 118 aa11.94□□□□□ -0.5
HDAC11-214ENST00000446613 IGHV4-59P01825 116 aa11.94□□□□□ -0.5
HDAC11-214ENST00000446613 HIST2H2BDQ6DRA6 164 aa11.94□□□□□ -0.5
HDAC11-214ENST00000446613 TMEM61Q8N0U2 210 aa11.94□□□□□ -0.5
HDAC11-214ENST00000446613 LINC00467Q9BRT7 94 aa11.94□□□□□ -0.5
HDAC11-214ENST00000446613 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
HDAC11-214ENST00000446613 CHD6Q8TD26 2715 aa11.94□□□□□ -0.5
HDAC11-214ENST00000446613 CHCHD5Q9BSY4 110 aa11.93□□□□□ -0.5
HDAC11-214ENST00000446613 UBE2D4Q9Y2X8 147 aa11.93□□□□□ -0.5
HDAC11-214ENST00000446613 SPANXDQ9BXN6 97 aa11.93□□□□□ -0.5
HDAC11-214ENST00000446613 SPANXCQ9NY87 97 aa11.93□□□□□ -0.5
HDAC11-214ENST00000446613 PYGO1Q9Y3Y4 419 aa11.93□□□□□ -0.5
HDAC11-214ENST00000446613 LST1O00453 97 aa11.92□□□□□ -0.5
HDAC11-214ENST00000446613 NDUFA7O95182 113 aa11.92□□□□□ -0.5
HDAC11-214ENST00000446613 COX6CP09669 75 aa11.92□□□□□ -0.5
HDAC11-214ENST00000446613 TRGV11A0A075B6L2 103 aa11.91□□□□□ -0.5
HDAC11-214ENST00000446613 CITED2Q99967 270 aaPredicted RBP11.91□□□□□ -0.5
HDAC11-214ENST00000446613 COX6A2Q02221 97 aa11.91□□□□□ -0.5
HDAC11-214ENST00000446613 WNK1Q9H4A3 2382 aa11.91□□□□□ -0.5
HDAC11-214ENST00000446613 DEFB136Q30KP8 78 aa11.9□□□□□ -0.5
HDAC11-214ENST00000446613 PIMREGQ9BSJ6 248 aa11.9□□□□□ -0.5
HDAC11-214ENST00000446613 SETD2Q9BYW2 2564 aaPredicted RBP11.9□□□□□ -0.5
HDAC11-214ENST00000446613 TINCRA0A1B0GVN0 87 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 RBMY1BA6NDE4 496 aaKnown RBP11.89□□□□□ -0.51
HDAC11-214ENST00000446613 RBMY1EA6NEQ0 496 aaKnown RBP11.89□□□□□ -0.51
HDAC11-214ENST00000446613 RBMY1DP0C7P1 496 aaKnown RBP11.89□□□□□ -0.51
HDAC11-214ENST00000446613 DEFB131AP59861 70 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 Q8N2B8 174 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 SMIM20Q8N5G0 67 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 TLN2Q9Y4G6 2542 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 C18orf65Q6ZTR6 163 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 C10orf105Q8TEF2 133 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 TMEM101Q96IK0 257 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 LINC01600Q96MT4 127 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 NF1P21359 2839 aa11.89□□□□□ -0.51
HDAC11-214ENST00000446613 JMJD1CQ15652 2540 aa11.88□□□□□ -0.51
HDAC11-214ENST00000446613 H3BT86 120 aa11.88□□□□□ -0.51
HDAC11-214ENST00000446613 DEFB112Q30KQ8 113 aa11.88□□□□□ -0.51
HDAC11-214ENST00000446613 NRGNQ92686 78 aa11.88□□□□□ -0.51
HDAC11-214ENST00000446613 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
HDAC11-214ENST00000446613 MSMBP08118 114 aa11.87□□□□□ -0.51
HDAC11-214ENST00000446613 HOXD3P31249 432 aaPredicted RBP11.87□□□□□ -0.51
HDAC11-214ENST00000446613 Q6Q795 121 aa11.87□□□□□ -0.51
HDAC11-214ENST00000446613 MAPK1IP1LQ8NDC0 245 aa11.87□□□□□ -0.51
HDAC11-214ENST00000446613 Q9H8V8 135 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms