RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 TLN2Q9Y4G6 2542 aa12.93□□□□□ -0.34
CLDN9-201ENST00000445369 UBE2D1P51668 147 aa12.93□□□□□ -0.34
CLDN9-201ENST00000445369 A0A0J9YXV3 536 aa12.92□□□□□ -0.34
CLDN9-201ENST00000445369 LEPROTO15243 131 aa12.92□□□□□ -0.34
CLDN9-201ENST00000445369 RS1O15537 224 aa12.92□□□□□ -0.34
CLDN9-201ENST00000445369 IGHV3-53P01767 116 aa12.92□□□□□ -0.34
CLDN9-201ENST00000445369 LGALS3P17931 250 aaKnown RBP12.92□□□□□ -0.34
CLDN9-201ENST00000445369 XCL2Q9UBD3 114 aa12.92□□□□□ -0.34
CLDN9-201ENST00000445369 CRYBA4P53673 196 aa12.91□□□□□ -0.34
CLDN9-201ENST00000445369 STHQ8IWL8 128 aa12.91□□□□□ -0.34
CLDN9-201ENST00000445369 SLC25A29Q8N8R3 303 aa12.91□□□□□ -0.34
CLDN9-201ENST00000445369 SONP18583 2426 aaKnown RBP12.91□□□□□ -0.34
CLDN9-201ENST00000445369 CITED2Q99967 270 aaPredicted RBP12.9□□□□□ -0.34
CLDN9-201ENST00000445369 CHCHD7Q9BUK0 85 aa12.9□□□□□ -0.34
CLDN9-201ENST00000445369 AZU1P20160 251 aa12.9□□□□□ -0.34
CLDN9-201ENST00000445369 C1orf158Q8N1D5 194 aa12.9□□□□□ -0.34
CLDN9-201ENST00000445369 IL17DQ8TAD2 202 aa12.9□□□□□ -0.34
CLDN9-201ENST00000445369 DNAJC30Q96LL9 226 aa12.9□□□□□ -0.34
CLDN9-201ENST00000445369 IGHV3-30P01768 117 aa12.89□□□□□ -0.35
CLDN9-201ENST00000445369 IGHV3-30-5P0DP03 117 aa12.89□□□□□ -0.35
CLDN9-201ENST00000445369 PGPEP1Q9NXJ5 209 aa12.89□□□□□ -0.35
CLDN9-201ENST00000445369 TSSC4Q9Y5U2 329 aaPredicted RBP12.89□□□□□ -0.35
CLDN9-201ENST00000445369 MRPS36P82909 103 aaKnown RBP12.88□□□□□ -0.35
CLDN9-201ENST00000445369 CEMP1Q6PRD7 247 aaPredicted RBP12.88□□□□□ -0.35
CLDN9-201ENST00000445369 LINC01006Q8NI28 216 aa12.88□□□□□ -0.35
CLDN9-201ENST00000445369 VPS25Q9BRG1 176 aa12.88□□□□□ -0.35
CLDN9-201ENST00000445369 C16orf95Q9H693 158 aa12.88□□□□□ -0.35
CLDN9-201ENST00000445369 UBE2D4Q9Y2X8 147 aa12.88□□□□□ -0.35
CLDN9-201ENST00000445369 FASNP49327 2511 aaKnown RBP12.87□□□□□ -0.35
CLDN9-201ENST00000445369 RNASE1P07998 156 aaKnown RBP12.87□□□□□ -0.35
CLDN9-201ENST00000445369 SPANXA1Q9NS26 97 aa12.87□□□□□ -0.35
CLDN9-201ENST00000445369 YAE1D1Q9NRH1 226 aa12.87□□□□□ -0.35
CLDN9-201ENST00000445369 G3V4G9 280 aa12.86□□□□□ -0.35
CLDN9-201ENST00000445369 CUBNO60494 3623 aa12.86□□□□□ -0.35
CLDN9-201ENST00000445369 FLNAP21333 2647 aaKnown RBP12.86□□□□□ -0.35
CLDN9-201ENST00000445369 IGHV3-64A0A075B6Q5 118 aa12.85□□□□□ -0.35
CLDN9-201ENST00000445369 H3BMG7 143 aa12.85□□□□□ -0.35
CLDN9-201ENST00000445369 WNK1Q9H4A3 2382 aa12.85□□□□□ -0.35
CLDN9-201ENST00000445369 IGHV3OR16-12A0A075B7B8 117 aa12.85□□□□□ -0.35
CLDN9-201ENST00000445369 F8W1H4 67 aa12.85□□□□□ -0.35
CLDN9-201ENST00000445369 TSPAN13O95857 204 aa12.85□□□□□ -0.35
CLDN9-201ENST00000445369 NDUFA11Q86Y39 141 aa12.85□□□□□ -0.35
CLDN9-201ENST00000445369 PDZD2O15018 2839 aa12.85□□□□□ -0.35
CLDN9-201ENST00000445369 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.84□□□□□ -0.35
CLDN9-201ENST00000445369 IGHV3-38A0A0C4DH36 116 aa12.84□□□□□ -0.35
CLDN9-201ENST00000445369 IGKV2-29A2NJV5 120 aaPredicted RBP12.84□□□□□ -0.35
CLDN9-201ENST00000445369 RNASE13Q5GAN3 156 aaKnown RBP12.84□□□□□ -0.35
CLDN9-201ENST00000445369 APOMO95445 188 aa12.84□□□□□ -0.35
CLDN9-201ENST00000445369 PCP4P48539 62 aa12.84□□□□□ -0.35
CLDN9-201ENST00000445369 COTL1Q14019 142 aa12.84□□□□□ -0.35
CLDN9-201ENST00000445369 ANK3Q12955 4377 aaKnown RBP12.83□□□□□ -0.36
CLDN9-201ENST00000445369 GCN1Q92616 2671 aaKnown RBP12.82□□□□□ -0.36
CLDN9-201ENST00000445369 CFC1BP0CG36 223 aa12.82□□□□□ -0.36
CLDN9-201ENST00000445369 CFC1P0CG37 223 aa12.82□□□□□ -0.36
CLDN9-201ENST00000445369 IGHV3-30-3P0DP02 117 aa12.82□□□□□ -0.36
CLDN9-201ENST00000445369 Q6ZUT4 128 aa12.82□□□□□ -0.36
CLDN9-201ENST00000445369 C10orf126Q8N4M7 172 aa12.82□□□□□ -0.36
CLDN9-201ENST00000445369 TRGV1A0A0A0MS02 117 aa12.82□□□□□ -0.36
CLDN9-201ENST00000445369 TINCRA0A1B0GVN0 87 aa12.82□□□□□ -0.36
CLDN9-201ENST00000445369 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
CLDN9-201ENST00000445369 PRO0461Q9UI25 63 aa12.82□□□□□ -0.36
CLDN9-201ENST00000445369 TEX48A0A1B0GUV7 120 aa12.81□□□□□ -0.36
CLDN9-201ENST00000445369 WFDC2Q14508 124 aa12.81□□□□□ -0.36
CLDN9-201ENST00000445369 TMEM263Q8WUH6 116 aaKnown RBP12.81□□□□□ -0.36
CLDN9-201ENST00000445369 CCDC168Q8NDH2 2452 aa12.81□□□□□ -0.36
CLDN9-201ENST00000445369 UBE2D3P61077 147 aa12.81□□□□□ -0.36
CLDN9-201ENST00000445369 UBE2D2P62837 147 aa12.81□□□□□ -0.36
CLDN9-201ENST00000445369 IGHV1-58A0A0C4DH39 117 aa12.8□□□□□ -0.36
CLDN9-201ENST00000445369 CMC4P56277 68 aaPredicted RBP12.8□□□□□ -0.36
CLDN9-201ENST00000445369 RPL24P83731 157 aaKnown RBP12.8□□□□□ -0.36
CLDN9-201ENST00000445369 GIG44P09565 113 aaPredicted RBP12.79□□□□□ -0.36
CLDN9-201ENST00000445369 GAGE13Q4V321 117 aa12.79□□□□□ -0.36
CLDN9-201ENST00000445369 TRAV8-3A0A0A6YYJ7 113 aa12.79□□□□□ -0.36
CLDN9-201ENST00000445369 A0A0J9YXY3 114 aa12.79□□□□□ -0.36
CLDN9-201ENST00000445369 TMEM238C9JI98 176 aa12.79□□□□□ -0.36
CLDN9-201ENST00000445369 IGLV1-51P01701 117 aa12.79□□□□□ -0.36
CLDN9-201ENST00000445369 Q6ZTI0 123 aa12.79□□□□□ -0.36
CLDN9-201ENST00000445369 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
CLDN9-201ENST00000445369 FAM110AQ9BQ89 295 aa12.78□□□□□ -0.36
CLDN9-201ENST00000445369 TRAV4A0A0B4J268 109 aa12.77□□□□□ -0.36
CLDN9-201ENST00000445369 C19orf73Q9NVV2 129 aa12.77□□□□□ -0.36
CLDN9-201ENST00000445369 TRBV10-1A0A0K0K1A3 114 aa12.77□□□□□ -0.37
CLDN9-201ENST00000445369 A4D1N5 150 aa12.77□□□□□ -0.37
CLDN9-201ENST00000445369 K7EQD1 137 aa12.77□□□□□ -0.37
CLDN9-201ENST00000445369 HILS1P60008 231 aa12.77□□□□□ -0.37
CLDN9-201ENST00000445369 C21orf62-AS1Q17RA5 79 aa12.77□□□□□ -0.37
CLDN9-201ENST00000445369 VSIG2Q96IQ7 327 aa12.77□□□□□ -0.37
CLDN9-201ENST00000445369 WFDC10AQ9H1F0 79 aa12.77□□□□□ -0.37
CLDN9-201ENST00000445369 EIF4EBP3O60516 100 aaPredicted RBP12.76□□□□□ -0.37
CLDN9-201ENST00000445369 MTURNQ8N3F0 131 aa12.76□□□□□ -0.37
CLDN9-201ENST00000445369 LITAFQ99732 161 aa12.76□□□□□ -0.37
CLDN9-201ENST00000445369 PRO1854Q9UHT4 67 aa12.76□□□□□ -0.37
CLDN9-201ENST00000445369 LOC107984156A0A0G2JMH3 177 aa12.76□□□□□ -0.37
CLDN9-201ENST00000445369 LYRM7Q5U5X0 104 aa12.76□□□□□ -0.37
CLDN9-201ENST00000445369 SFTA2Q6UW10 78 aa12.76□□□□□ -0.37
CLDN9-201ENST00000445369 MUSTN1Q8IVN3 82 aa12.76□□□□□ -0.37
CLDN9-201ENST00000445369 ARL17AQ8IVW1 177 aa12.76□□□□□ -0.37
CLDN9-201ENST00000445369 ZNF418Q8TF45 676 aaPredicted RBP12.76□□□□□ -0.37
CLDN9-201ENST00000445369 DAZ2Q13117 558 aaKnown RBP12.75□□□□□ -0.37
CLDN9-201ENST00000445369 IGLV5-45A0A087WSX0 123 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms