RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
LRCH1-204ENST00000443945 MRPL54Q6P161 138 aaKnown RBP12.48□□□□□ -0.41
LRCH1-204ENST00000443945 NEGR1Q7Z3B1 354 aa12.48□□□□□ -0.41
LRCH1-204ENST00000443945 Q8N976 141 aa12.48□□□□□ -0.41
LRCH1-204ENST00000443945 GTSF1Q8WW33 167 aa12.48□□□□□ -0.41
LRCH1-204ENST00000443945 Q9UF83 564 aa12.48□□□□□ -0.41
LRCH1-204ENST00000443945 CACNG7P62955 275 aa12.47□□□□□ -0.41
LRCH1-204ENST00000443945 F5H697 171 aa12.47□□□□□ -0.41
LRCH1-204ENST00000443945 TWIST1Q15672 202 aa12.47□□□□□ -0.41
LRCH1-204ENST00000443945 ZNF56Q15929 161 aa12.47□□□□□ -0.41
LRCH1-204ENST00000443945 PGLYRP4Q96LB8 373 aa12.47□□□□□ -0.41
LRCH1-204ENST00000443945 AP1S3Q96PC3 154 aa12.47□□□□□ -0.41
LRCH1-204ENST00000443945 Q9H8V8 135 aa12.47□□□□□ -0.41
LRCH1-204ENST00000443945 NPSP0C0P6 89 aa12.46□□□□□ -0.41
LRCH1-204ENST00000443945 GAGE1Q13065 139 aa12.46□□□□□ -0.41
LRCH1-204ENST00000443945 SPATA45Q537H7 98 aa12.46□□□□□ -0.41
LRCH1-204ENST00000443945 LYPD5Q6UWN5 251 aa12.46□□□□□ -0.41
LRCH1-204ENST00000443945 Q6ZR54 194 aa12.46□□□□□ -0.41
LRCH1-204ENST00000443945 TSKUQ8WUA8 353 aa12.46□□□□□ -0.42
LRCH1-204ENST00000443945 MRPS16Q9Y3D3 137 aaKnown RBP12.46□□□□□ -0.42
LRCH1-204ENST00000443945 APCSP02743 223 aa12.45□□□□□ -0.42
LRCH1-204ENST00000443945 CTRLP40313 264 aa12.45□□□□□ -0.42
LRCH1-204ENST00000443945 HIGD1CA8MV81 97 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 EVI2AP22794 236 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 ATP5L2Q7Z4Y8 100 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 KRTAP1-5Q9BYS1 174 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 GAGE12JA6NER3 117 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 GAGE4Q13068 117 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 GAGE5Q13069 117 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 COL5A1-AS1Q5SY13 56 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
LRCH1-204ENST00000443945 NBDYA0A0U1RRE5 68 aa12.43□□□□□ -0.42
LRCH1-204ENST00000443945 MGPP08493 103 aa12.43□□□□□ -0.42
LRCH1-204ENST00000443945 C3orf79P0CE67 100 aa12.43□□□□□ -0.42
LRCH1-204ENST00000443945 NIT1Q86X76 327 aa12.43□□□□□ -0.42
LRCH1-204ENST00000443945 BORCS7Q96B45 105 aa12.43□□□□□ -0.42
LRCH1-204ENST00000443945 UPK3BQ9BT76 320 aa12.42□□□□□ -0.42
LRCH1-204ENST00000443945 FAT2Q9NYQ8 4349 aa12.42□□□□□ -0.42
LRCH1-204ENST00000443945 FOXA3P55318 350 aaPredicted RBP12.42□□□□□ -0.42
LRCH1-204ENST00000443945 NUP35Q8NFH5 326 aa12.42□□□□□ -0.42
LRCH1-204ENST00000443945 CNFNQ9BYD5 112 aa12.42□□□□□ -0.42
LRCH1-204ENST00000443945 GFRA4Q9GZZ7 299 aa12.42□□□□□ -0.42
LRCH1-204ENST00000443945 UQCR10Q9UDW1 63 aa12.42□□□□□ -0.42
LRCH1-204ENST00000443945 RTL8CO15255 209 aa12.41□□□□□ -0.42
LRCH1-204ENST00000443945 SH2D6Q7Z4S9 175 aa12.41□□□□□ -0.42
LRCH1-204ENST00000443945 ALKBH7Q9BT30 221 aaPredicted RBP12.41□□□□□ -0.42
LRCH1-204ENST00000443945 LINC00614P0C842 121 aa12.41□□□□□ -0.42
LRCH1-204ENST00000443945 IGLC3P0DOY3 106 aa12.41□□□□□ -0.42
LRCH1-204ENST00000443945 KIF25-AS1Q9Y6Z4 181 aa12.41□□□□□ -0.42
LRCH1-204ENST00000443945 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
LRCH1-204ENST00000443945 TIRAPP58753 221 aa12.4□□□□□ -0.42
LRCH1-204ENST00000443945 Q6ZN92 141 aa12.4□□□□□ -0.42
LRCH1-204ENST00000443945 SMIM15Q7Z3B0 74 aa12.4□□□□□ -0.42
LRCH1-204ENST00000443945 WFDC10BQ8IUB3 73 aa12.4□□□□□ -0.42
LRCH1-204ENST00000443945 ATP6V0E2Q8NHE4 81 aa12.4□□□□□ -0.42
LRCH1-204ENST00000443945 C18orf32Q8TCD1 76 aa12.4□□□□□ -0.42
LRCH1-204ENST00000443945 DPH3P1Q9H4G8 78 aa12.39□□□□□ -0.43
LRCH1-204ENST00000443945 HECTD4Q9Y4D8 3996 aa12.39□□□□□ -0.43
LRCH1-204ENST00000443945 A0A1B0GUT8 65 aa12.39□□□□□ -0.43
LRCH1-204ENST00000443945 SIVA1O15304 175 aa12.39□□□□□ -0.43
LRCH1-204ENST00000443945 HNRNPA3P51991 378 aaKnown RBP12.39□□□□□ -0.43
LRCH1-204ENST00000443945 ATOH7Q8N100 152 aa12.39□□□□□ -0.43
LRCH1-204ENST00000443945 A0A1B0GXF2 115 aa12.38□□□□□ -0.43
LRCH1-204ENST00000443945 LINC00315P59091 139 aa12.38□□□□□ -0.43
LRCH1-204ENST00000443945 RPL36AP83881 106 aaKnown RBP12.38□□□□□ -0.43
LRCH1-204ENST00000443945 RPL36ALQ969Q0 106 aaKnown RBP12.38□□□□□ -0.43
LRCH1-204ENST00000443945 TRBV10-1A0A0K0K1A3 114 aa12.38□□□□□ -0.43
LRCH1-204ENST00000443945 C1orf134Q5TEV5 83 aa12.38□□□□□ -0.43
LRCH1-204ENST00000443945 STPG4Q8N801 248 aa12.38□□□□□ -0.43
LRCH1-204ENST00000443945 GEMIN7Q9H840 131 aaKnown RBP12.37□□□□□ -0.43
LRCH1-204ENST00000443945 LAMTOR2Q9Y2Q5 125 aa12.37□□□□□ -0.43
LRCH1-204ENST00000443945 DNAH17Q9UFH2 4485 aa12.37□□□□□ -0.43
LRCH1-204ENST00000443945 TRBV7-3A0A075B6L6 115 aa12.36□□□□□ -0.43
LRCH1-204ENST00000443945 HSBP1O75506 76 aa12.36□□□□□ -0.43
LRCH1-204ENST00000443945 GTSF1LQ9H1H1 148 aa12.36□□□□□ -0.43
LRCH1-204ENST00000443945 LINC00694P0DN24 101 aa12.35□□□□□ -0.43
LRCH1-204ENST00000443945 HBBP68871 147 aa12.35□□□□□ -0.43
LRCH1-204ENST00000443945 PMCHL1Q16048 86 aa12.35□□□□□ -0.43
LRCH1-204ENST00000443945 SUMO4Q6EEV6 95 aa12.35□□□□□ -0.43
LRCH1-204ENST00000443945 BIRC6Q9NR09 4857 aa12.35□□□□□ -0.43
LRCH1-204ENST00000443945 H7C1H1 209 aa12.34□□□□□ -0.43
LRCH1-204ENST00000443945 CAMPP49913 170 aa12.34□□□□□ -0.43
LRCH1-204ENST00000443945 RIGQ13278 110 aa12.34□□□□□ -0.43
LRCH1-204ENST00000443945 NEXN-AS1Q8NBZ9 246 aa12.34□□□□□ -0.43
LRCH1-204ENST00000443945 RNASEKQ6P5S7 137 aaKnown RBP12.34□□□□□ -0.43
LRCH1-204ENST00000443945 C6orf223Q8N319 242 aa12.34□□□□□ -0.43
LRCH1-204ENST00000443945 TNFRSF18Q9Y5U5 241 aa12.34□□□□□ -0.43
LRCH1-204ENST00000443945 TRAV26-2A0A0B4J265 109 aa12.33□□□□□ -0.44
LRCH1-204ENST00000443945 PRSS29PA6NIE9 313 aa12.33□□□□□ -0.44
LRCH1-204ENST00000443945 M0QY20 66 aa12.33□□□□□ -0.44
LRCH1-204ENST00000443945 TTC32Q5I0X7 151 aa12.33□□□□□ -0.44
LRCH1-204ENST00000443945 TRAV8-6A0A0B4J262 113 aa12.32□□□□□ -0.44
LRCH1-204ENST00000443945 IGHV3-38A0A0C4DH36 116 aa12.32□□□□□ -0.44
LRCH1-204ENST00000443945 HINT1P49773 126 aaPredicted RBP12.32□□□□□ -0.44
LRCH1-204ENST00000443945 PKHD1P08F94 4074 aa12.32□□□□□ -0.44
LRCH1-204ENST00000443945 PKD1P98161 4303 aa12.31□□□□□ -0.44
LRCH1-204ENST00000443945 TRAV9-2A0A087WT02 112 aa12.31□□□□□ -0.44
LRCH1-204ENST00000443945 UBE2D3P61077 147 aa12.31□□□□□ -0.44
LRCH1-204ENST00000443945 UBE2D2P62837 147 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms