RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 KIAA1109Q2LD37 5005 aa8.53□□□□□ -1.04
PDLIM2-212ENST00000443561 TRAV9-2A0A087WT02 112 aa8.53□□□□□ -1.04
PDLIM2-212ENST00000443561 A0A087WTM6 91 aa8.53□□□□□ -1.04
PDLIM2-212ENST00000443561 KRTAP26-1Q6PEX3 210 aa8.53□□□□□ -1.04
PDLIM2-212ENST00000443561 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
PDLIM2-212ENST00000443561 TRBV25-1A0A075B6N4 114 aa8.52□□□□□ -1.05
PDLIM2-212ENST00000443561 A0A1B0GW15 77 aa8.52□□□□□ -1.05
PDLIM2-212ENST00000443561 ESDP10768 282 aa8.52□□□□□ -1.05
PDLIM2-212ENST00000443561 TMEM97Q5BJF2 176 aa8.52□□□□□ -1.05
PDLIM2-212ENST00000443561 ATP5L2Q7Z4Y8 100 aa8.52□□□□□ -1.05
PDLIM2-212ENST00000443561 PRR34Q9NV39 138 aa8.52□□□□□ -1.05
PDLIM2-212ENST00000443561 TMEM242Q9NWH2 141 aa8.52□□□□□ -1.05
PDLIM2-212ENST00000443561 TRBV27A0A0K0K1C4 114 aa8.51□□□□□ -1.05
PDLIM2-212ENST00000443561 NPYP01303 97 aa8.51□□□□□ -1.05
PDLIM2-212ENST00000443561 AMTP48728 403 aa8.51□□□□□ -1.05
PDLIM2-212ENST00000443561 COTL1Q14019 142 aa8.51□□□□□ -1.05
PDLIM2-212ENST00000443561 SPATA12Q7Z6I5 190 aa8.51□□□□□ -1.05
PDLIM2-212ENST00000443561 NFE4Q86UQ8 179 aa8.51□□□□□ -1.05
PDLIM2-212ENST00000443561 CLRN3Q8NCR9 226 aa8.51□□□□□ -1.05
PDLIM2-212ENST00000443561 TMEM243Q9BU79 118 aa8.51□□□□□ -1.05
PDLIM2-212ENST00000443561 APOBP04114 4563 aaKnown RBP8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 TRBV24-1A0A075B6N3 115 aa8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 A0A087WX48 190 aa8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 IGKV2-29A2NJV5 120 aaPredicted RBP8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 C7orf77A4D0Y5 90 aa8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 D6R8Y8 96 aa8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 CLPSL2Q6UWE3 100 aa8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 UBE2WQ96B02 151 aa8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 ST20Q9HBF5 79 aa8.5□□□□□ -1.05
PDLIM2-212ENST00000443561 TMEM262E9PQX1 116 aa8.49□□□□□ -1.05
PDLIM2-212ENST00000443561 ANGP03950 147 aaKnown RBP8.49□□□□□ -1.05
PDLIM2-212ENST00000443561 SUMO2P61956 95 aaKnown RBP8.49□□□□□ -1.05
PDLIM2-212ENST00000443561 TMEM136Q6ZRR5 245 aa8.49□□□□□ -1.05
PDLIM2-212ENST00000443561 IMMP2LQ96T52 175 aa8.49□□□□□ -1.05
PDLIM2-212ENST00000443561 CTDSP1Q9GZU7 261 aa8.49□□□□□ -1.05
PDLIM2-212ENST00000443561 TRAV8-3A0A0A6YYJ7 113 aa8.48□□□□□ -1.05
PDLIM2-212ENST00000443561 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
PDLIM2-212ENST00000443561 I3L3M4 83 aa8.48□□□□□ -1.05
PDLIM2-212ENST00000443561 TNFRSF6BO95407 300 aa8.48□□□□□ -1.05
PDLIM2-212ENST00000443561 KCNIP4Q6PIL6 250 aa8.48□□□□□ -1.05
PDLIM2-212ENST00000443561 BTF3L4Q96K17 158 aa8.48□□□□□ -1.05
PDLIM2-212ENST00000443561 URGCP-MRPS24S4R325 110 aa8.48□□□□□ -1.05
PDLIM2-212ENST00000443561 RYR1P21817 5038 aa8.48□□□□□ -1.05
PDLIM2-212ENST00000443561 HSPG2P98160 4391 aa8.48□□□□□ -1.05
PDLIM2-212ENST00000443561 APCSP02743 223 aa8.47□□□□□ -1.05
PDLIM2-212ENST00000443561 PMCHP20382 165 aa8.47□□□□□ -1.05
PDLIM2-212ENST00000443561 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
PDLIM2-212ENST00000443561 LINC00269Q8N2A0 174 aa8.47□□□□□ -1.05
PDLIM2-212ENST00000443561 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.47□□□□□ -1.05
PDLIM2-212ENST00000443561 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
PDLIM2-212ENST00000443561 LECT2O14960 151 aa8.46□□□□□ -1.06
PDLIM2-212ENST00000443561 S100A8P05109 93 aa8.46□□□□□ -1.06
PDLIM2-212ENST00000443561 FGF6P10767 208 aa8.46□□□□□ -1.06
PDLIM2-212ENST00000443561 CKS2P33552 79 aa8.46□□□□□ -1.06
PDLIM2-212ENST00000443561 RHEBQ15382 184 aa8.46□□□□□ -1.06
PDLIM2-212ENST00000443561 SLC7A5P1Q8MH63 180 aa8.46□□□□□ -1.06
PDLIM2-212ENST00000443561 SMIM2Q9BVW6 85 aa8.46□□□□□ -1.06
PDLIM2-212ENST00000443561 DNAH8Q96JB1 4490 aa8.46□□□□□ -1.06
PDLIM2-212ENST00000443561 IGKV2D-24A0A075B6R9 120 aa8.45□□□□□ -1.06
PDLIM2-212ENST00000443561 BAALCQ8WXS3 180 aa8.45□□□□□ -1.06
PDLIM2-212ENST00000443561 YPEL4Q96NS1 127 aa8.45□□□□□ -1.06
PDLIM2-212ENST00000443561 C20orf78Q9BR46 151 aa8.45□□□□□ -1.06
PDLIM2-212ENST00000443561 RPS10P5Q9NQ39 176 aa8.45□□□□□ -1.06
PDLIM2-212ENST00000443561 PHOX2AO14813 284 aa8.44□□□□□ -1.06
PDLIM2-212ENST00000443561 APOC3P02656 99 aa8.44□□□□□ -1.06
PDLIM2-212ENST00000443561 PKIAP61925 76 aa8.44□□□□□ -1.06
PDLIM2-212ENST00000443561 REG3AQ06141 175 aa8.44□□□□□ -1.06
PDLIM2-212ENST00000443561 ELOBQ15370 118 aa8.44□□□□□ -1.06
PDLIM2-212ENST00000443561 ORMDL3Q8N138 153 aa8.44□□□□□ -1.06
PDLIM2-212ENST00000443561 Q8N814 137 aa8.44□□□□□ -1.06
PDLIM2-212ENST00000443561 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
PDLIM2-212ENST00000443561 PRELID3AQ96N28 172 aa8.44□□□□□ -1.06
PDLIM2-212ENST00000443561 IGLV10-54A0A075B6I4 117 aa8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 TRAV9-1A0A075B6T8 112 aa8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 PRSS47A8MTI9 375 aa8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 C16orf90A8MZG2 172 aa8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 H7C423 109 aa8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 VCYO14598 125 aa8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 PPBPP02775 128 aa8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 KIAA1644Q3SXP7 199 aa8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 MRPL52Q86TS9 123 aaKnown RBP8.43□□□□□ -1.06
PDLIM2-212ENST00000443561 TCAPO15273 167 aa8.42□□□□□ -1.06
PDLIM2-212ENST00000443561 PSCAO43653 123 aa8.42□□□□□ -1.06
PDLIM2-212ENST00000443561 PPP1R17O96001 155 aa8.42□□□□□ -1.06
PDLIM2-212ENST00000443561 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
PDLIM2-212ENST00000443561 Q0VG73 95 aa8.42□□□□□ -1.06
PDLIM2-212ENST00000443561 MIAQ16674 131 aa8.42□□□□□ -1.06
PDLIM2-212ENST00000443561 TM2D2Q9BX73 214 aa8.42□□□□□ -1.06
PDLIM2-212ENST00000443561 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
PDLIM2-212ENST00000443561 TGIF2-C20orf24A0A0A6YYL0 155 aa8.41□□□□□ -1.06
PDLIM2-212ENST00000443561 UBE2L6O14933 153 aa8.41□□□□□ -1.06
PDLIM2-212ENST00000443561 CRPP02741 224 aa8.41□□□□□ -1.06
PDLIM2-212ENST00000443561 C1orf43Q9BWL3 253 aa8.41□□□□□ -1.06
PDLIM2-212ENST00000443561 RNASE13Q5GAN3 156 aaKnown RBP8.4□□□□□ -1.06
PDLIM2-212ENST00000443561 RNASEKQ6P5S7 137 aaKnown RBP8.4□□□□□ -1.06
PDLIM2-212ENST00000443561 Q6ZUT4 128 aa8.4□□□□□ -1.06
PDLIM2-212ENST00000443561 CDC42SE2Q9NRR3 84 aa8.4□□□□□ -1.06
PDLIM2-212ENST00000443561 USP17L23D6RBM5 183 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms