RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 Q6ZTI0 123 aa16.82■□□□□ 0.28
CTDSPL-206ENST00000443503 ODF3Q96PU9 254 aa16.82■□□□□ 0.28
CTDSPL-206ENST00000443503 SND1-IT1Q9HBX3 110 aa16.82■□□□□ 0.28
CTDSPL-206ENST00000443503 F8WEM9 126 aa16.82■□□□□ 0.28
CTDSPL-206ENST00000443503 HIST2H2BDQ6DRA6 164 aa16.81■□□□□ 0.28
CTDSPL-206ENST00000443503 RNF185Q96GF1 192 aa16.81■□□□□ 0.28
CTDSPL-206ENST00000443503 A0A1W2PPR1 153 aa16.81■□□□□ 0.28
CTDSPL-206ENST00000443503 C11orf21Q9P2W6 132 aa16.81■□□□□ 0.28
CTDSPL-206ENST00000443503 RNASE8Q8TDE3 154 aaKnown RBP16.81■□□□□ 0.28
CTDSPL-206ENST00000443503 Q6ZUT4 128 aa16.8■□□□□ 0.28
CTDSPL-206ENST00000443503 Q6ZSV7 163 aa16.8■□□□□ 0.28
CTDSPL-206ENST00000443503 IGHV3-30-3P0DP02 117 aa16.8■□□□□ 0.28
CTDSPL-206ENST00000443503 ZNF843Q8N446 348 aa16.8■□□□□ 0.28
CTDSPL-206ENST00000443503 PSMB8P28062 276 aa16.79■□□□□ 0.28
CTDSPL-206ENST00000443503 TRBV10-1A0A0K0K1A3 114 aa16.79■□□□□ 0.28
CTDSPL-206ENST00000443503 TINCRA0A1B0GVN0 87 aa16.79■□□□□ 0.28
CTDSPL-206ENST00000443503 COX7B2Q8TF08 81 aa16.78■□□□□ 0.28
CTDSPL-206ENST00000443503 COX7A2LO14548 114 aa16.78■□□□□ 0.28
CTDSPL-206ENST00000443503 ICOSQ9Y6W8 199 aa16.78■□□□□ 0.28
CTDSPL-206ENST00000443503 BAALC-AS2P0C853 105 aa16.77■□□□□ 0.28
CTDSPL-206ENST00000443503 PRR9Q5T870 116 aa16.77■□□□□ 0.28
CTDSPL-206ENST00000443503 IGHV1-58A0A0C4DH39 117 aa16.77■□□□□ 0.28
CTDSPL-206ENST00000443503 C1orf43Q9BWL3 253 aa16.77■□□□□ 0.28
CTDSPL-206ENST00000443503 RANBP2P49792 3224 aaKnown RBP16.77■□□□□ 0.27
CTDSPL-206ENST00000443503 ANKRD29Q8N6D5 301 aa16.77■□□□□ 0.27
CTDSPL-206ENST00000443503 AVPP01185 164 aa16.76■□□□□ 0.27
CTDSPL-206ENST00000443503 IGHV3-30P01768 117 aa16.76■□□□□ 0.27
CTDSPL-206ENST00000443503 IGHV3-33P01772 117 aa16.76■□□□□ 0.27
CTDSPL-206ENST00000443503 IGHV3-30-5P0DP03 117 aa16.76■□□□□ 0.27
CTDSPL-206ENST00000443503 IGKV2D-26A0A0A0MRZ7 120 aa16.75■□□□□ 0.27
CTDSPL-206ENST00000443503 HAMPP81172 84 aa16.74■□□□□ 0.27
CTDSPL-206ENST00000443503 U3KQK5 164 aa16.74■□□□□ 0.27
CTDSPL-206ENST00000443503 UBL5Q9BZL1 73 aa16.74■□□□□ 0.27
CTDSPL-206ENST00000443503 LINC01620Q4KN68 170 aa16.74■□□□□ 0.27
CTDSPL-206ENST00000443503 NEXN-AS1Q8NBZ9 246 aa16.74■□□□□ 0.27
CTDSPL-206ENST00000443503 PRO0255Q9UI72 69 aa16.73■□□□□ 0.27
CTDSPL-206ENST00000443503 GAS8-AS1O95177 125 aa16.72■□□□□ 0.27
CTDSPL-206ENST00000443503 C15orf53Q8NAA6 179 aa16.72■□□□□ 0.27
CTDSPL-206ENST00000443503 RMI2Q96E14 147 aa16.72■□□□□ 0.27
CTDSPL-206ENST00000443503 C5orf42Q9H799 3197 aa16.72■□□□□ 0.27
CTDSPL-206ENST00000443503 RNASE3P12724 160 aaKnown RBP16.72■□□□□ 0.27
CTDSPL-206ENST00000443503 ZNF702PQ9H963 129 aa16.72■□□□□ 0.27
CTDSPL-206ENST00000443503 M0QY20 66 aa16.71■□□□□ 0.27
CTDSPL-206ENST00000443503 LINC00310P59036 64 aa16.71■□□□□ 0.27
CTDSPL-206ENST00000443503 CAMK2N2Q96S95 79 aa16.71■□□□□ 0.27
CTDSPL-206ENST00000443503 TEN1Q86WV5 123 aa16.71■□□□□ 0.27
CTDSPL-206ENST00000443503 ZMAT4Q9H898 229 aa16.71■□□□□ 0.27
CTDSPL-206ENST00000443503 INSL3P51460 131 aa16.7■□□□□ 0.26
CTDSPL-206ENST00000443503 PSMG3-AS1Q96PY0 264 aa16.7■□□□□ 0.26
CTDSPL-206ENST00000443503 TNRC6BQ9UPQ9 1833 aaKnown RBP16.7■□□□□ 0.26
CTDSPL-206ENST00000443503 RS1O15537 224 aa16.7■□□□□ 0.26
CTDSPL-206ENST00000443503 IGLV1-40P01703 118 aa16.7■□□□□ 0.26
CTDSPL-206ENST00000443503 PROK1P58294 105 aa16.69■□□□□ 0.26
CTDSPL-206ENST00000443503 MIR7-3HGQ8N6C7 128 aa16.69■□□□□ 0.26
CTDSPL-206ENST00000443503 LINC00467Q9BRT7 94 aa16.69■□□□□ 0.26
CTDSPL-206ENST00000443503 KLK12Q9UKR0 248 aa16.69■□□□□ 0.26
CTDSPL-206ENST00000443503 MRPS12O15235 138 aaKnown RBP16.69■□□□□ 0.26
CTDSPL-206ENST00000443503 TMEM126AQ9H061 195 aa16.69■□□□□ 0.26
CTDSPL-206ENST00000443503 RPL32P62910 135 aaKnown RBP16.68■□□□□ 0.26
CTDSPL-206ENST00000443503 C18orf65Q6ZTR6 163 aa16.68■□□□□ 0.26
CTDSPL-206ENST00000443503 CDKN2A-AS1Q9UH64 79 aa16.68■□□□□ 0.26
CTDSPL-206ENST00000443503 NRACQ8N912 160 aa16.68■□□□□ 0.26
CTDSPL-206ENST00000443503 NDUFA11Q86Y39 141 aa16.67■□□□□ 0.26
CTDSPL-206ENST00000443503 MAPKAPK5-AS1Q8N8E1 139 aa16.67■□□□□ 0.26
CTDSPL-206ENST00000443503 IGLV4-3A0A075B6K6 122 aa16.67■□□□□ 0.26
CTDSPL-206ENST00000443503 DSCR8Q96T75 97 aa16.67■□□□□ 0.26
CTDSPL-206ENST00000443503 ORMDL1Q9P0S3 153 aa16.66■□□□□ 0.26
CTDSPL-206ENST00000443503 KLLNB2CW77 178 aa16.66■□□□□ 0.26
CTDSPL-206ENST00000443503 HTTP42858 3142 aa16.66■□□□□ 0.26
CTDSPL-206ENST00000443503 PTH2Q96A98 100 aa16.65■□□□□ 0.26
CTDSPL-206ENST00000443503 CRYBA4P53673 196 aa16.65■□□□□ 0.26
CTDSPL-206ENST00000443503 A0A0J9YXY3 114 aa16.65■□□□□ 0.26
CTDSPL-206ENST00000443503 H0YGX0 51 aa16.65■□□□□ 0.26
CTDSPL-206ENST00000443503 ZNF22P17026 224 aaPredicted RBP16.65■□□□□ 0.26
CTDSPL-206ENST00000443503 IGHV4-4A0A075B6R2 117 aa16.65■□□□□ 0.26
CTDSPL-206ENST00000443503 CLEC2BQ92478 149 aa16.65■□□□□ 0.26
CTDSPL-206ENST00000443503 DCANP1Q8TF63 244 aa16.64■□□□□ 0.25
CTDSPL-206ENST00000443503 PRM2P04554 102 aa16.64■□□□□ 0.25
CTDSPL-206ENST00000443503 INAFM1C9JVW0 142 aa16.64■□□□□ 0.25
CTDSPL-206ENST00000443503 F8W735 103 aaPredicted RBP16.64■□□□□ 0.25
CTDSPL-206ENST00000443503 CFAP126Q5VTH2 177 aa16.64■□□□□ 0.25
CTDSPL-206ENST00000443503 NFE4Q86UQ8 179 aa16.64■□□□□ 0.25
CTDSPL-206ENST00000443503 TRBV27A0A0K0K1C4 114 aa16.63■□□□□ 0.25
CTDSPL-206ENST00000443503 C9orf153Q5TBE3 101 aa16.63■□□□□ 0.25
CTDSPL-206ENST00000443503 FAM222AQ5U5X8 452 aa16.63■□□□□ 0.25
CTDSPL-206ENST00000443503 SPAG11BQ08648 103 aa16.63■□□□□ 0.25
CTDSPL-206ENST00000443503 RAI1Q7Z5J4 1906 aaPredicted RBP16.62■□□□□ 0.25
CTDSPL-206ENST00000443503 TM2D2Q9BX73 214 aa16.62■□□□□ 0.25
CTDSPL-206ENST00000443503 LINC01006Q8NI28 216 aa16.61■□□□□ 0.25
CTDSPL-206ENST00000443503 KRTAP10-9P60411 292 aa16.61■□□□□ 0.25
CTDSPL-206ENST00000443503 EDN2P20800 178 aa16.61■□□□□ 0.25
CTDSPL-206ENST00000443503 CCL18P55774 89 aa16.6■□□□□ 0.25
CTDSPL-206ENST00000443503 CNFNQ9BYD5 112 aa16.6■□□□□ 0.25
CTDSPL-206ENST00000443503 MIAQ16674 131 aa16.6■□□□□ 0.25
CTDSPL-206ENST00000443503 URB1-AS1Q96HZ7 61 aa16.59■□□□□ 0.25
CTDSPL-206ENST00000443503 ANKRD17O75179 2603 aaKnown RBP16.59■□□□□ 0.25
CTDSPL-206ENST00000443503 FOXI1Q12951 378 aa16.59■□□□□ 0.25
CTDSPL-206ENST00000443503 TRAV26-1A0A087WT03 109 aa16.59■□□□□ 0.25
CTDSPL-206ENST00000443503 TRBV6-5A0A0K0K1A5 114 aa16.59■□□□□ 0.25
CTDSPL-206ENST00000443503 LECT2O14960 151 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms