RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CAMPP49913 170 aa5.96□□□□□ -1.46
CCDC39-201ENST00000442201 BEAN1Q3B7T3 259 aa5.96□□□□□ -1.46
CCDC39-201ENST00000442201 Q6ZQT7 251 aa5.96□□□□□ -1.46
CCDC39-201ENST00000442201 TRAV12-3A0A0B4J271 114 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 TNFRSF6BO95407 300 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 IGLC6P0CF74 106 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 UBE2D3P61077 147 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 UBE2D2P62837 147 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 RIGQ13278 110 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 LYZL1Q6UWQ5 148 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 SORL1Q92673 2214 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 TRBV25-1A0A075B6N4 114 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 ARMS2P0C7Q2 107 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 STHQ8IWL8 128 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 SPANXDQ9BXN6 97 aa5.95□□□□□ -1.46
CCDC39-201ENST00000442201 TRAV12-2A0A075B6T6 113 aa5.94□□□□□ -1.46
CCDC39-201ENST00000442201 CD7P09564 240 aa5.94□□□□□ -1.46
CCDC39-201ENST00000442201 ZNF575Q86XF7 245 aa5.94□□□□□ -1.46
CCDC39-201ENST00000442201 WFDC9Q8NEX5 89 aa5.94□□□□□ -1.46
CCDC39-201ENST00000442201 SPATA3Q8NHX4 192 aa5.94□□□□□ -1.46
CCDC39-201ENST00000442201 RBMY1BA6NDE4 496 aaKnown RBP5.94□□□□□ -1.46
CCDC39-201ENST00000442201 RBMY1EA6NEQ0 496 aaKnown RBP5.94□□□□□ -1.46
CCDC39-201ENST00000442201 RBMY1DP0C7P1 496 aaKnown RBP5.94□□□□□ -1.46
CCDC39-201ENST00000442201 S100A4P26447 101 aaKnown RBP5.94□□□□□ -1.46
CCDC39-201ENST00000442201 FXYD7P58549 80 aa5.94□□□□□ -1.46
CCDC39-201ENST00000442201 TRBV7-3A0A075B6L6 115 aa5.93□□□□□ -1.46
CCDC39-201ENST00000442201 TRBV7-7A0A0K0K1E9 115 aa5.93□□□□□ -1.46
CCDC39-201ENST00000442201 HERVK_113P63121 156 aa5.93□□□□□ -1.46
CCDC39-201ENST00000442201 TRPT1Q86TN4 253 aaKnown RBP5.93□□□□□ -1.46
CCDC39-201ENST00000442201 C3orf22Q8N5N4 141 aa5.93□□□□□ -1.46
CCDC39-201ENST00000442201 CNFNQ9BYD5 112 aa5.93□□□□□ -1.46
CCDC39-201ENST00000442201 C19orf73Q9NVV2 129 aa5.93□□□□□ -1.46
CCDC39-201ENST00000442201 HHLA3Q9XRX5 114 aa5.93□□□□□ -1.46
CCDC39-201ENST00000442201 IGKV2D-26A0A0A0MRZ7 120 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 H3BVH4 76 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 GTSCR1Q86UQ5 136 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 ANKRD29Q8N6D5 301 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 LINC00526Q96FQ7 95 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 NOTCH3Q9UM47 2321 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 IGHV1OR15-1A0A075B7D0 117 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 GNRH2O43555 120 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 SEC61GP60059 68 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 CACNG7P62955 275 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 TWIST1Q15672 202 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 Q5XG85 94 aa5.92□□□□□ -1.46
CCDC39-201ENST00000442201 FBN1P35555 2871 aaKnown RBP5.92□□□□□ -1.46
CCDC39-201ENST00000442201 A8MWV9 139 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 RS1O15537 224 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 MED14OSP0DP75 135 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 WFDC10AQ9H1F0 79 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 TIMM8BQ9Y5J9 83 aaPredicted RBP5.91□□□□□ -1.46
CCDC39-201ENST00000442201 UQCRQO14949 82 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 INSP01308 110 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 SPANXN1Q5VSR9 72 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 VWFP04275 2813 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 EMP1P54849 157 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 LYRM7Q5U5X0 104 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 EDA2RQ9HAV5 297 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 XCL2Q9UBD3 114 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 PHLDA3Q9Y5J5 127 aa5.91□□□□□ -1.46
CCDC39-201ENST00000442201 AGRNO00468 2067 aa5.9□□□□□ -1.46
CCDC39-201ENST00000442201 RBMY1A1P0DJD3 496 aaKnown RBP5.9□□□□□ -1.46
CCDC39-201ENST00000442201 RBMY1CP0DJD4 496 aa5.9□□□□□ -1.46
CCDC39-201ENST00000442201 RNASE3P12724 160 aaKnown RBP5.9□□□□□ -1.46
CCDC39-201ENST00000442201 MALP21145 153 aa5.9□□□□□ -1.46
CCDC39-201ENST00000442201 RBMY1FQ15415 496 aaKnown RBP5.9□□□□□ -1.46
CCDC39-201ENST00000442201 ZNF493Q6ZR52 646 aa5.9□□□□□ -1.46
CCDC39-201ENST00000442201 POM121L12Q8N7R1 296 aa5.9□□□□□ -1.46
CCDC39-201ENST00000442201 PRO0628Q9UI54 55 aa5.9□□□□□ -1.46
CCDC39-201ENST00000442201 TRGV11A0A075B6L2 103 aa5.9□□□□□ -1.47
CCDC39-201ENST00000442201 Q8N1Y9 231 aa5.9□□□□□ -1.47
CCDC39-201ENST00000442201 MSRB1Q9NZV6 116 aa5.9□□□□□ -1.47
CCDC39-201ENST00000442201 IGHV4-4A0A075B6R2 117 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 MYMXA0A1B0GTQ4 84 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 RPL35AP18077 110 aaKnown RBP5.89□□□□□ -1.47
CCDC39-201ENST00000442201 RPL13AP40429 203 aaKnown RBP5.89□□□□□ -1.47
CCDC39-201ENST00000442201 CHCHD5Q9BSY4 110 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 IGHV3-16A0A0C4DH30 117 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 M0R381 172 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 HTN1P15515 57 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 UBE2D1P51668 147 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 C15orf53Q8NAA6 179 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 IMUPQ9GZP8 106 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 CRYGAP11844 174 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 C9orf153Q5TBE3 101 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 FAM104BQ5XKR9 115 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 STAB1Q9NY15 2570 aa5.89□□□□□ -1.47
CCDC39-201ENST00000442201 COL6A5A8TX70 2615 aa5.88□□□□□ -1.47
CCDC39-201ENST00000442201 LINC01546A6NGU7 62 aa5.88□□□□□ -1.47
CCDC39-201ENST00000442201 ATP5G1P05496 136 aa5.88□□□□□ -1.47
CCDC39-201ENST00000442201 AMN1Q8IY45 258 aa5.88□□□□□ -1.47
CCDC39-201ENST00000442201 IFI27L1Q96BM0 104 aa5.88□□□□□ -1.47
CCDC39-201ENST00000442201 U3KQK5 164 aa5.88□□□□□ -1.47
CCDC39-201ENST00000442201 SPRY2O43597 315 aa5.88□□□□□ -1.47
CCDC39-201ENST00000442201 LINC00467Q9BRT7 94 aa5.88□□□□□ -1.47
CCDC39-201ENST00000442201 FAM240AA0A1B0GVK7 77 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 K7EMI3 77 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 NPYP01303 97 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 SCGB1C2P0DMR2 95 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 PSMB2P49721 201 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms