RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 VAX2Q9UIW0 290 aa4.42□□□□□ -1.7
ERCC8-203ENST00000439176 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.41□□□□□ -1.7
ERCC8-203ENST00000439176 TRAV8-4A0A0B4J246 113 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 F2Z2F3 143 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 G3V3Q6 166 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 UBE2L6O14933 153 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 BCL2L11O43521 198 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 P01737 135 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 TRGC1P0CF51 173 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 GZMBP10144 247 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 GNG4P50150 75 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 RAB5CP51148 216 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 PTTG1IPP53801 180 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 RPL37AP61513 92 aaKnown RBP4.41□□□□□ -1.7
ERCC8-203ENST00000439176 RBX1P62877 108 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 GAGE6Q13070 117 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 IQCJQ1A5X6 159 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 C9orf163Q8N9P6 203 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 FER1L6-AS1Q8NA97 138 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 OR2D3Q8NGH3 330 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 SMIM12Q96EX1 92 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 DPH3Q96FX2 82 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 PRR34Q9NV39 138 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 GNG13Q9P2W3 67 aa4.41□□□□□ -1.7
ERCC8-203ENST00000439176 hDV102S1A0JD36 115 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 SMLR1H3BR10 107 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 M0QY20 66 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 PDE6DO43924 150 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 IFNA1P01562 189 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 SLPIP03973 132 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 PRSS1P07477 247 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 REG3AQ06141 175 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 CENPWQ5EE01 88 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 WDR73Q6P4I2 378 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 CLPSL2Q6UWE3 100 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 NTM-AS1Q6ZSK4 140 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 TMEM243Q9BU79 118 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 KIF25-AS1Q9Y6Z4 181 aa4.4□□□□□ -1.71
ERCC8-203ENST00000439176 TRAV1-1A0A0B4J248 108 aa4.39□□□□□ -1.71
ERCC8-203ENST00000439176 A0A1B0GUV1 79 aa4.39□□□□□ -1.71
ERCC8-203ENST00000439176 NKX2-5P52952 324 aaPredicted RBP4.39□□□□□ -1.71
ERCC8-203ENST00000439176 CCL20P78556 96 aa4.39□□□□□ -1.71
ERCC8-203ENST00000439176 SUMO4Q6EEV6 95 aa4.39□□□□□ -1.71
ERCC8-203ENST00000439176 CFAP161Q6P656 301 aa4.39□□□□□ -1.71
ERCC8-203ENST00000439176 RASL11AQ6T310 242 aa4.39□□□□□ -1.71
ERCC8-203ENST00000439176 C11orf52Q96A22 123 aa4.39□□□□□ -1.71
ERCC8-203ENST00000439176 NIT2Q9NQR4 276 aa4.39□□□□□ -1.71
ERCC8-203ENST00000439176 IGLV10-54A0A075B6I4 117 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 IGHV3-64A0A075B6Q5 118 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 IGLC6P0CF74 106 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 TAGLN2P37802 199 aaKnown RBP4.38□□□□□ -1.71
ERCC8-203ENST00000439176 SULT1A2P50226 295 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 CNBPP62633 177 aaKnown RBP4.38□□□□□ -1.71
ERCC8-203ENST00000439176 MEF2BQ02080 365 aaPredicted RBP4.38□□□□□ -1.71
ERCC8-203ENST00000439176 COTL1Q14019 142 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 TWIST1Q15672 202 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 SMIM15Q7Z3B0 74 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 PGLYRP4Q96LB8 373 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 DPH3P1Q9H4G8 78 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 MED9Q9NWA0 146 aa4.38□□□□□ -1.71
ERCC8-203ENST00000439176 C19orf71A6NCJ1 209 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 NTF3P20783 257 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 AMTP48728 403 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
ERCC8-203ENST00000439176 AMMECR1LQ6DCA0 310 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 TEX261Q6UWH6 196 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 LYZL1Q6UWQ5 148 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 SDIM1Q6ZPB5 146 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 C9orf62Q8N4C0 152 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 C20orf203Q8NBC4 194 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 RNF185Q96GF1 192 aa4.37□□□□□ -1.71
ERCC8-203ENST00000439176 RAB19A4D1S5 217 aa4.36□□□□□ -1.71
ERCC8-203ENST00000439176 KRTAP26-1Q6PEX3 210 aa4.36□□□□□ -1.71
ERCC8-203ENST00000439176 Q6ZRU5 148 aa4.36□□□□□ -1.71
ERCC8-203ENST00000439176 C7orf33Q8WU49 177 aa4.36□□□□□ -1.71
ERCC8-203ENST00000439176 PKIGQ9Y2B9 76 aa4.36□□□□□ -1.71
ERCC8-203ENST00000439176 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
ERCC8-203ENST00000439176 IGKV3OR2-268A0A0C4DH90 116 aa4.35□□□□□ -1.71
ERCC8-203ENST00000439176 H7C423 109 aa4.35□□□□□ -1.71
ERCC8-203ENST00000439176 NCR2O95944 276 aa4.35□□□□□ -1.71
ERCC8-203ENST00000439176 BCL2P10415 239 aa4.35□□□□□ -1.71
ERCC8-203ENST00000439176 CTRLP40313 264 aa4.35□□□□□ -1.71
ERCC8-203ENST00000439176 BORCS7Q96B45 105 aa4.35□□□□□ -1.71
ERCC8-203ENST00000439176 RPP21Q9H633 154 aaKnown RBP4.35□□□□□ -1.71
ERCC8-203ENST00000439176 GAGE12HA6NDE8 117 aa4.34□□□□□ -1.71
ERCC8-203ENST00000439176 APCSP02743 223 aa4.34□□□□□ -1.71
ERCC8-203ENST00000439176 RPS10P46783 165 aaKnown RBP4.34□□□□□ -1.71
ERCC8-203ENST00000439176 CIRBPQ14011 172 aaKnown RBP4.34□□□□□ -1.71
ERCC8-203ENST00000439176 RNASEKQ6P5S7 137 aaKnown RBP4.34□□□□□ -1.71
ERCC8-203ENST00000439176 SLC51BQ86UW2 128 aa4.34□□□□□ -1.71
ERCC8-203ENST00000439176 TMEM101Q96IK0 257 aa4.34□□□□□ -1.71
ERCC8-203ENST00000439176 BTF3L4Q96K17 158 aa4.34□□□□□ -1.71
ERCC8-203ENST00000439176 FAM210AQ96ND0 272 aa4.34□□□□□ -1.71
ERCC8-203ENST00000439176 CNFNQ9BYD5 112 aa4.34□□□□□ -1.71
ERCC8-203ENST00000439176 LRP1Q07954 4544 aaKnown RBP4.33□□□□□ -1.72
ERCC8-203ENST00000439176 TRBV20OR9-2A0A075B6H5 130 aa4.33□□□□□ -1.72
ERCC8-203ENST00000439176 A0A087WYN8 130 aa4.33□□□□□ -1.72
ERCC8-203ENST00000439176 A8MWL6 223 aa4.33□□□□□ -1.72
ERCC8-203ENST00000439176 I3L3M4 83 aa4.33□□□□□ -1.72
ERCC8-203ENST00000439176 NDUFS6O75380 124 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms