RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 USP9XQ93008 2570 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-204ENST00000438964 PTPN13Q12923 2485 aa9.88□□□□□ -0.83
ACTN1-204ENST00000438964 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-204ENST00000438964 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
ACTN1-204ENST00000438964 SONP18583 2426 aaKnown RBP9.88□□□□□ -0.83
ACTN1-204ENST00000438964 OOSP1A8MZH6 123 aa9.88□□□□□ -0.83
ACTN1-204ENST00000438964 C10orf99Q6UWK7 81 aa9.88□□□□□ -0.83
ACTN1-204ENST00000438964 LENEPQ9Y5L5 61 aa9.88□□□□□ -0.83
ACTN1-204ENST00000438964 LOC107984640A0A0U1RRK4 108 aa9.87□□□□□ -0.83
ACTN1-204ENST00000438964 FAM110AQ9BQ89 295 aa9.87□□□□□ -0.83
ACTN1-204ENST00000438964 AKAP9Q99996 3911 aa9.87□□□□□ -0.83
ACTN1-204ENST00000438964 ID1P41134 155 aa9.87□□□□□ -0.83
ACTN1-204ENST00000438964 POM121L12Q8N7R1 296 aa9.87□□□□□ -0.83
ACTN1-204ENST00000438964 NPFFO15130 113 aa9.86□□□□□ -0.83
ACTN1-204ENST00000438964 TRBV30A0A0K0K1B3 111 aa9.86□□□□□ -0.83
ACTN1-204ENST00000438964 FAM19A4Q96LR4 140 aa9.85□□□□□ -0.83
ACTN1-204ENST00000438964 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
ACTN1-204ENST00000438964 SMCR5Q8TEV8 140 aa9.85□□□□□ -0.83
ACTN1-204ENST00000438964 MXRA5Q9NR99 2828 aa9.85□□□□□ -0.83
ACTN1-204ENST00000438964 COX6CP09669 75 aa9.85□□□□□ -0.83
ACTN1-204ENST00000438964 HIST2H2BDQ6DRA6 164 aa9.85□□□□□ -0.83
ACTN1-204ENST00000438964 KLLNB2CW77 178 aa9.84□□□□□ -0.83
ACTN1-204ENST00000438964 SYNJ2BPP57105 145 aa9.84□□□□□ -0.83
ACTN1-204ENST00000438964 NXPH4O95158 308 aa9.84□□□□□ -0.83
ACTN1-204ENST00000438964 FAM104AQ969W3 186 aa9.84□□□□□ -0.83
ACTN1-204ENST00000438964 LINC00694P0DN24 101 aa9.83□□□□□ -0.84
ACTN1-204ENST00000438964 HOXD3P31249 432 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-204ENST00000438964 CHD6Q8TD26 2715 aa9.83□□□□□ -0.84
ACTN1-204ENST00000438964 NDUFA4O00483 81 aa9.83□□□□□ -0.84
ACTN1-204ENST00000438964 NDUFA7O95182 113 aa9.83□□□□□ -0.84
ACTN1-204ENST00000438964 Q8N2B8 174 aa9.83□□□□□ -0.84
ACTN1-204ENST00000438964 FLNCQ14315 2725 aa9.83□□□□□ -0.84
ACTN1-204ENST00000438964 LINC01587Q99440 93 aa9.82□□□□□ -0.84
ACTN1-204ENST00000438964 Q6ZSN1 163 aa9.82□□□□□ -0.84
ACTN1-204ENST00000438964 VPREB3Q9UKI3 123 aa9.82□□□□□ -0.84
ACTN1-204ENST00000438964 H3BUX3 64 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 IGHV1-69P01742 117 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 IGHG2P01859 326 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 IGHV4-38-2P0DP08 117 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 NSUN5P1Q3KNT7 163 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 C11orf71Q6IPW1 123 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 TMEM61Q8N0U2 210 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-204ENST00000438964 CDKN2A-AS1Q9UH64 79 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 MOB4Q9Y3A3 225 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 LST1O00453 97 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 MED14OSP0DP75 135 aa9.81□□□□□ -0.84
ACTN1-204ENST00000438964 DAZ1Q9NQZ3 744 aaKnown RBP9.81□□□□□ -0.84
ACTN1-204ENST00000438964 M0QXV9 152 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 MIAQ16674 131 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 C9orf153Q5TBE3 101 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 Q9HAA7 133 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 NF1P21359 2839 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 IGHV1-58A0A0C4DH39 117 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 FAM223BA6NKX1 122 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 Q6Q795 121 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 FAM223AQ8IWN6 122 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 DCANP1Q8TF63 244 aa9.8□□□□□ -0.84
ACTN1-204ENST00000438964 CITED2Q99967 270 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-204ENST00000438964 EPG5Q9HCE0 2579 aa9.79□□□□□ -0.84
ACTN1-204ENST00000438964 ADORA2A-AS1P86434 159 aa9.79□□□□□ -0.84
ACTN1-204ENST00000438964 TRBV6-5A0A0K0K1A5 114 aa9.79□□□□□ -0.84
ACTN1-204ENST00000438964 RBMY1A1P0DJD3 496 aaKnown RBP9.79□□□□□ -0.84
ACTN1-204ENST00000438964 RBMY1CP0DJD4 496 aa9.79□□□□□ -0.84
ACTN1-204ENST00000438964 RBMY1FQ15415 496 aaKnown RBP9.79□□□□□ -0.84
ACTN1-204ENST00000438964 RHOHQ15669 191 aa9.79□□□□□ -0.84
ACTN1-204ENST00000438964 VSIG2Q96IQ7 327 aa9.79□□□□□ -0.84
ACTN1-204ENST00000438964 IGHV1OR15-1A0A075B7D0 117 aa9.78□□□□□ -0.84
ACTN1-204ENST00000438964 C9orf85Q96MD7 179 aa9.78□□□□□ -0.84
ACTN1-204ENST00000438964 APRG1Q8IVJ8 170 aa9.78□□□□□ -0.84
ACTN1-204ENST00000438964 LINC00467Q9BRT7 94 aa9.78□□□□□ -0.84
ACTN1-204ENST00000438964 H3BT86 120 aa9.77□□□□□ -0.84
ACTN1-204ENST00000438964 LMO4P61968 165 aa9.77□□□□□ -0.84
ACTN1-204ENST00000438964 COX6A2Q02221 97 aa9.77□□□□□ -0.84
ACTN1-204ENST00000438964 TMEM101Q96IK0 257 aa9.77□□□□□ -0.84
ACTN1-204ENST00000438964 TNFRSF18Q9Y5U5 241 aa9.77□□□□□ -0.84
ACTN1-204ENST00000438964 DAZ2Q13117 558 aaKnown RBP9.77□□□□□ -0.85
ACTN1-204ENST00000438964 DAZ4Q86SG3 579 aaKnown RBP9.77□□□□□ -0.85
ACTN1-204ENST00000438964 Q9H8V8 135 aa9.77□□□□□ -0.85
ACTN1-204ENST00000438964 DAZ3Q9NR90 486 aaKnown RBP9.77□□□□□ -0.85
ACTN1-204ENST00000438964 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
ACTN1-204ENST00000438964 FN1P02751 2386 aaKnown RBP9.76□□□□□ -0.85
ACTN1-204ENST00000438964 MRPS36P82909 103 aaKnown RBP9.76□□□□□ -0.85
ACTN1-204ENST00000438964 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
ACTN1-204ENST00000438964 FAM218AQ96MZ4 157 aa9.75□□□□□ -0.85
ACTN1-204ENST00000438964 CYSTM1Q9H1C7 97 aa9.75□□□□□ -0.85
ACTN1-204ENST00000438964 TRAV13-1A0A0B4J241 112 aa9.75□□□□□ -0.85
ACTN1-204ENST00000438964 KLRB1Q12918 225 aa9.75□□□□□ -0.85
ACTN1-204ENST00000438964 SOSTDC1Q6X4U4 206 aa9.75□□□□□ -0.85
ACTN1-204ENST00000438964 NBPF19A0A087WUL8 3843 aa9.75□□□□□ -0.85
ACTN1-204ENST00000438964 C19orf54Q5BKX5 351 aa9.74□□□□□ -0.85
ACTN1-204ENST00000438964 EDA2RQ9HAV5 297 aa9.74□□□□□ -0.85
ACTN1-204ENST00000438964 A0A0J9YX75 114 aa9.74□□□□□ -0.85
ACTN1-204ENST00000438964 NBEAL2Q6ZNJ1 2754 aa9.74□□□□□ -0.85
ACTN1-204ENST00000438964 HERVK_113P63121 156 aa9.74□□□□□ -0.85
ACTN1-204ENST00000438964 SDIM1Q6ZPB5 146 aa9.74□□□□□ -0.85
ACTN1-204ENST00000438964 NAV2Q8IVL1 2488 aa9.73□□□□□ -0.85
ACTN1-204ENST00000438964 CFHR3Q02985 330 aa9.73□□□□□ -0.85
ACTN1-204ENST00000438964 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
ACTN1-204ENST00000438964 DGAT2L7PQ6IED9 249 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms