RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 M0R135 149 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 TNFP01375 233 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 NMBP08949 121 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 SPINK8P0C7L1 97 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 IFITM1P13164 125 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 S100PP25815 95 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 GCHFRP30047 84 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 CFAP126Q5VTH2 177 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 GTF2H5Q6ZYL4 71 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 KRTAP19-3Q7Z4W3 81 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 C8orf59Q8N0T1 100 aaPredicted RBP0.54□□□□□ -2.32
PTPN4-205ENST00000433888 BPESC1Q9GZL8 116 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 MUC5ACP98088 5654 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 SIPA1L3O60292 1781 aaPredicted RBP0.54□□□□□ -2.32
PTPN4-205ENST00000433888 MYO7AQ13402 2215 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 PPIP5K1Q6PFW1 1433 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 PZPP20742 1482 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 MRC1P22897 1456 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 GOLGA3Q08378 1498 aa0.54□□□□□ -2.32
PTPN4-205ENST00000433888 TRBV7-3A0A075B6L6 115 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 FAM24AA6NFZ4 105 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 TMEM14DPA8MWL7 114 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 SMIM6P0DI80 62 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 CCL18P55774 89 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 GNG11P61952 73 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 MRPS10P82664 201 aaKnown RBP0.53□□□□□ -2.32
PTPN4-205ENST00000433888 COMMD6Q7Z4G1 85 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 C14orf144Q96I85 54 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 R4GMQ9 66 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 V9GYH0 126 aa0.53□□□□□ -2.32
PTPN4-205ENST00000433888 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.33
PTPN4-205ENST00000433888 G3V318 75 aa0.52□□□□□ -2.33
PTPN4-205ENST00000433888 CHKB-CPT1BH3BT56 60 aa0.52□□□□□ -2.33
PTPN4-205ENST00000433888 WHAMMP3Q1A5X7 153 aa0.52□□□□□ -2.33
PTPN4-205ENST00000433888 SPATA8Q6RVD6 105 aa0.52□□□□□ -2.33
PTPN4-205ENST00000433888 BAGE3Q86Y29 109 aa0.52□□□□□ -2.33
PTPN4-205ENST00000433888 NDUFA4L2Q9NRX3 87 aa0.52□□□□□ -2.33
PTPN4-205ENST00000433888 IER3IP1Q9Y5U9 82 aa0.52□□□□□ -2.33
PTPN4-205ENST00000433888 UBE2L5PA0A1B0GUS4 154 aa0.51□□□□□ -2.33
PTPN4-205ENST00000433888 EIF4G3O43432 1585 aaKnown RBP0.51□□□□□ -2.33
PTPN4-205ENST00000433888 KDM5AP29375 1690 aaKnown RBP0.51□□□□□ -2.33
PTPN4-205ENST00000433888 S100A10P60903 97 aa0.51□□□□□ -2.33
PTPN4-205ENST00000433888 UBE2L3P68036 154 aaKnown RBP0.51□□□□□ -2.33
PTPN4-205ENST00000433888 TCHHQ07283 1943 aa0.51□□□□□ -2.33
PTPN4-205ENST00000433888 HSD52Q0P140 79 aa0.51□□□□□ -2.33
PTPN4-205ENST00000433888 SSBP3-AS1Q7Z2R9 100 aa0.51□□□□□ -2.33
PTPN4-205ENST00000433888 MYOZ3Q8TDC0 251 aa0.51□□□□□ -2.33
PTPN4-205ENST00000433888 MANBALQ9NQG1 85 aa0.51□□□□□ -2.33
PTPN4-205ENST00000433888 CC2D2AQ9P2K1 1620 aa0.51□□□□□ -2.33
PTPN4-205ENST00000433888 SCP2D1Q9UJQ7 156 aa0.51□□□□□ -2.33
PTPN4-205ENST00000433888 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
PTPN4-205ENST00000433888 BCL9LQ86UU0 1499 aa0.5□□□□□ -2.33
PTPN4-205ENST00000433888 HMGN4O00479 90 aa0.5□□□□□ -2.33
PTPN4-205ENST00000433888 SSSCA1O60232 199 aa0.5□□□□□ -2.33
PTPN4-205ENST00000433888 HAMPP81172 84 aa0.5□□□□□ -2.33
PTPN4-205ENST00000433888 MGST2Q99735 147 aa0.5□□□□□ -2.33
PTPN4-205ENST00000433888 CYP4F30PQ9H0H9 118 aa0.5□□□□□ -2.33
PTPN4-205ENST00000433888 DYNLRB1Q9NP97 96 aa0.5□□□□□ -2.33
PTPN4-205ENST00000433888 BTAF1O14981 1849 aa0.5□□□□□ -2.33
PTPN4-205ENST00000433888 WDR7Q9Y4E6 1490 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 SCAPERQ9BY12 1400 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 PI4KAP42356 2102 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 IGLC7A0M8Q6 106 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 ZNF815PA8K554 130 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 M0R3E3 92 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 RBP2P50120 134 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 CGREF1Q99674 301 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 PROK2Q9HC23 129 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 LENEPQ9Y5L5 61 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 LRRC37A3O60309 1634 aa0.49□□□□□ -2.33
PTPN4-205ENST00000433888 CDK13Q14004 1512 aaKnown RBP0.48□□□□□ -2.33
PTPN4-205ENST00000433888 JMJD1CQ15652 2540 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 C10orf71Q711Q0 1435 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 hADV29S1A0JD25 119 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 F8VRH5 84 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 KMT2DO14686 5537 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 DCDP81605 110 aaKnown RBP0.48□□□□□ -2.33
PTPN4-205ENST00000433888 Q0VG73 95 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 NCMAPQ5T1S8 102 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 Q5VV11 94 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 UBE2DNLQ8IWF7 75 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 TCEAL7Q9BRU2 100 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 KDM6BO15054 1643 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 NRKQ7Z2Y5 1582 aa0.48□□□□□ -2.33
PTPN4-205ENST00000433888 TET3O43151 1660 aa0.47□□□□□ -2.33
PTPN4-205ENST00000433888 TMEM218A2RU14 115 aa0.47□□□□□ -2.33
PTPN4-205ENST00000433888 C10orf142B7Z368 130 aa0.47□□□□□ -2.33
PTPN4-205ENST00000433888 KRTAP2-3P0C7H8 128 aa0.47□□□□□ -2.33
PTPN4-205ENST00000433888 TMEM170BQ5T4T1 132 aa0.47□□□□□ -2.33
PTPN4-205ENST00000433888 BAGE2Q86Y30 109 aa0.47□□□□□ -2.33
PTPN4-205ENST00000433888 KRTAP2-4Q9BYR9 128 aa0.47□□□□□ -2.33
PTPN4-205ENST00000433888 KRTAP2-1Q9BYU5 128 aa0.47□□□□□ -2.33
PTPN4-205ENST00000433888 ARL2-SNX15V9GYD0 113 aa0.47□□□□□ -2.33
PTPN4-205ENST00000433888 KIF21AQ7Z4S6 1674 aa0.46□□□□□ -2.34
PTPN4-205ENST00000433888 CADP27708 2225 aa0.46□□□□□ -2.34
PTPN4-205ENST00000433888 SHROOM2Q13796 1616 aa0.46□□□□□ -2.34
PTPN4-205ENST00000433888 PLXNB2O15031 1838 aa0.46□□□□□ -2.34
PTPN4-205ENST00000433888 TRAV22A0A0B4J277 110 aa0.46□□□□□ -2.34
PTPN4-205ENST00000433888 CRYM-AS1A6NIL9 109 aa0.46□□□□□ -2.34
PTPN4-205ENST00000433888 GNGT2O14610 69 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms