RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
CHFR-203ENST00000432561 AMELXQ99217 191 aa12.09□□□□□ -0.47
CHFR-203ENST00000432561 ODF3L2Q3SX64 289 aa12.08□□□□□ -0.47
CHFR-203ENST00000432561 VCX2Q9H322 139 aa12.08□□□□□ -0.47
CHFR-203ENST00000432561 TNFRSF18Q9Y5U5 241 aa12.08□□□□□ -0.47
CHFR-203ENST00000432561 TEX48A0A1B0GUV7 120 aa12.08□□□□□ -0.48
CHFR-203ENST00000432561 CFAP126Q5VTH2 177 aa12.08□□□□□ -0.48
CHFR-203ENST00000432561 C11orf72Q8NBR9 251 aa12.08□□□□□ -0.48
CHFR-203ENST00000432561 ZNF22P17026 224 aaPredicted RBP12.07□□□□□ -0.48
CHFR-203ENST00000432561 ZNF415Q09FC8 603 aa12.07□□□□□ -0.48
CHFR-203ENST00000432561 ANK3Q12955 4377 aaKnown RBP12.07□□□□□ -0.48
CHFR-203ENST00000432561 LGALS3P17931 250 aaKnown RBP12.07□□□□□ -0.48
CHFR-203ENST00000432561 NFE4Q86UQ8 179 aa12.07□□□□□ -0.48
CHFR-203ENST00000432561 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.07□□□□□ -0.48
CHFR-203ENST00000432561 IGKV2-29A2NJV5 120 aaPredicted RBP12.07□□□□□ -0.48
CHFR-203ENST00000432561 TMEM223A0PJW6 202 aa12.06□□□□□ -0.48
CHFR-203ENST00000432561 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
CHFR-203ENST00000432561 A8MWV9 139 aa12.06□□□□□ -0.48
CHFR-203ENST00000432561 G3V4G9 280 aa12.06□□□□□ -0.48
CHFR-203ENST00000432561 RHODO00212 210 aa12.06□□□□□ -0.48
CHFR-203ENST00000432561 SPXQ9BT56 116 aa12.06□□□□□ -0.48
CHFR-203ENST00000432561 UBE2D1P51668 147 aa12.05□□□□□ -0.48
CHFR-203ENST00000432561 SH2D6Q7Z4S9 175 aa12.05□□□□□ -0.48
CHFR-203ENST00000432561 INSP01308 110 aa12.05□□□□□ -0.48
CHFR-203ENST00000432561 TSPAN13O95857 204 aa12.04□□□□□ -0.48
CHFR-203ENST00000432561 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
CHFR-203ENST00000432561 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
CHFR-203ENST00000432561 CITED2Q99967 270 aaPredicted RBP12.04□□□□□ -0.48
CHFR-203ENST00000432561 TRAV8-3A0A0A6YYJ7 113 aa12.04□□□□□ -0.48
CHFR-203ENST00000432561 TRAV2A0A0B4J234 112 aa12.04□□□□□ -0.48
CHFR-203ENST00000432561 LOC107984156A0A0G2JMH3 177 aa12.04□□□□□ -0.48
CHFR-203ENST00000432561 ARL17AQ8IVW1 177 aa12.04□□□□□ -0.48
CHFR-203ENST00000432561 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
CHFR-203ENST00000432561 TMEM238LA0A1B0GVL6 79 aa12.03□□□□□ -0.48
CHFR-203ENST00000432561 A6NJY4 79 aa12.03□□□□□ -0.48
CHFR-203ENST00000432561 CCL24O00175 119 aa12.03□□□□□ -0.48
CHFR-203ENST00000432561 FASNP49327 2511 aaKnown RBP12.03□□□□□ -0.48
CHFR-203ENST00000432561 A8MZ25 164 aa12.03□□□□□ -0.48
CHFR-203ENST00000432561 ETDBQ3ZM63 59 aa12.03□□□□□ -0.48
CHFR-203ENST00000432561 CHCHD7Q9BUK0 85 aa12.03□□□□□ -0.48
CHFR-203ENST00000432561 STHQ8IWL8 128 aa12.02□□□□□ -0.49
CHFR-203ENST00000432561 LINC00467Q9BRT7 94 aa12.02□□□□□ -0.49
CHFR-203ENST00000432561 WFDC10AQ9H1F0 79 aa12.02□□□□□ -0.49
CHFR-203ENST00000432561 UNC79Q9P2D8 2635 aa12.02□□□□□ -0.49
CHFR-203ENST00000432561 NDUFA11Q86Y39 141 aa12.02□□□□□ -0.49
CHFR-203ENST00000432561 C1orf158Q8N1D5 194 aa12.02□□□□□ -0.49
CHFR-203ENST00000432561 LEPROTO15243 131 aa12.01□□□□□ -0.49
CHFR-203ENST00000432561 IGHV3-53P01767 116 aa12.01□□□□□ -0.49
CHFR-203ENST00000432561 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
CHFR-203ENST00000432561 CFC1P0CG37 223 aa12.01□□□□□ -0.49
CHFR-203ENST00000432561 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
CHFR-203ENST00000432561 EDA2RQ9HAV5 297 aa12.01□□□□□ -0.49
CHFR-203ENST00000432561 Q6ZUT4 128 aa12□□□□□ -0.49
CHFR-203ENST00000432561 FN1P02751 2386 aaKnown RBP12□□□□□ -0.49
CHFR-203ENST00000432561 TRGV1A0A0A0MS02 117 aa12□□□□□ -0.49
CHFR-203ENST00000432561 GAGE13Q4V321 117 aa12□□□□□ -0.49
CHFR-203ENST00000432561 TMEM86BQ8N661 226 aa12□□□□□ -0.49
CHFR-203ENST00000432561 NOTCH2Q04721 2471 aa11.99□□□□□ -0.49
CHFR-203ENST00000432561 IGHV3-30-3P0DP02 117 aa11.99□□□□□ -0.49
CHFR-203ENST00000432561 FHL3Q13643 280 aa11.99□□□□□ -0.49
CHFR-203ENST00000432561 SPANXB1Q9NS25 103 aaPredicted RBP11.99□□□□□ -0.49
CHFR-203ENST00000432561 PRO0461Q9UI25 63 aa11.99□□□□□ -0.49
CHFR-203ENST00000432561 UBE2D4Q9Y2X8 147 aa11.99□□□□□ -0.49
CHFR-203ENST00000432561 F8W1H4 67 aa11.99□□□□□ -0.49
CHFR-203ENST00000432561 EIF4EBP3O60516 100 aaPredicted RBP11.99□□□□□ -0.49
CHFR-203ENST00000432561 PSMB2P49721 201 aa11.99□□□□□ -0.49
CHFR-203ENST00000432561 KRTAP1-1Q07627 177 aa11.98□□□□□ -0.49
CHFR-203ENST00000432561 YAE1D1Q9NRH1 226 aa11.98□□□□□ -0.49
CHFR-203ENST00000432561 PYGO1Q9Y3Y4 419 aa11.98□□□□□ -0.49
CHFR-203ENST00000432561 A4D1N5 150 aa11.98□□□□□ -0.49
CHFR-203ENST00000432561 INSL3P51460 131 aa11.98□□□□□ -0.49
CHFR-203ENST00000432561 MRPS36P82909 103 aaKnown RBP11.97□□□□□ -0.49
CHFR-203ENST00000432561 BEAN1Q3B7T3 259 aa11.97□□□□□ -0.49
CHFR-203ENST00000432561 Q6ZTI0 123 aa11.97□□□□□ -0.49
CHFR-203ENST00000432561 LINC01006Q8NI28 216 aa11.97□□□□□ -0.49
CHFR-203ENST00000432561 TIMM21Q9BVV7 248 aa11.97□□□□□ -0.49
CHFR-203ENST00000432561 H7C2G1 150 aa11.97□□□□□ -0.49
CHFR-203ENST00000432561 SPINK8P0C7L1 97 aa11.97□□□□□ -0.49
CHFR-203ENST00000432561 RS1O15537 224 aa11.96□□□□□ -0.49
CHFR-203ENST00000432561 MUSTN1Q8IVN3 82 aa11.96□□□□□ -0.49
CHFR-203ENST00000432561 HECTD1Q9ULT8 2610 aa11.96□□□□□ -0.49
CHFR-203ENST00000432561 GCN1Q92616 2671 aaKnown RBP11.96□□□□□ -0.49
CHFR-203ENST00000432561 COTL1Q14019 142 aa11.96□□□□□ -0.5
CHFR-203ENST00000432561 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.5
CHFR-203ENST00000432561 A0A0J9YXY3 114 aa11.95□□□□□ -0.5
CHFR-203ENST00000432561 NBEAL2Q6ZNJ1 2754 aa11.95□□□□□ -0.5
CHFR-203ENST00000432561 SMCPP49901 116 aaPredicted RBP11.94□□□□□ -0.5
CHFR-203ENST00000432561 NPC2P61916 151 aa11.94□□□□□ -0.5
CHFR-203ENST00000432561 PIK3CD-AS1Q5SR53 167 aa11.94□□□□□ -0.5
CHFR-203ENST00000432561 NDUFA7O95182 113 aa11.94□□□□□ -0.5
CHFR-203ENST00000432561 UBE2D3P61077 147 aa11.94□□□□□ -0.5
CHFR-203ENST00000432561 UBE2D2P62837 147 aa11.94□□□□□ -0.5
CHFR-203ENST00000432561 HIVEP2P31629 2446 aa11.94□□□□□ -0.5
CHFR-203ENST00000432561 VWFP04275 2813 aa11.94□□□□□ -0.5
CHFR-203ENST00000432561 LINC00694P0DN24 101 aa11.93□□□□□ -0.5
CHFR-203ENST00000432561 PLA2G2AP14555 144 aa11.93□□□□□ -0.5
CHFR-203ENST00000432561 RPL35AP18077 110 aaKnown RBP11.93□□□□□ -0.5
CHFR-203ENST00000432561 PTH2Q96A98 100 aa11.93□□□□□ -0.5
CHFR-203ENST00000432561 TCL1BO95988 128 aa11.93□□□□□ -0.5
CHFR-203ENST00000432561 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms