RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 C2orf50Q96LR7 162 aa2.16□□□□□ -2.06
PTPN4-204ENST00000431283 HYLS1Q96M11 299 aa2.16□□□□□ -2.06
PTPN4-204ENST00000431283 SLC25A2Q9BXI2 301 aa2.16□□□□□ -2.06
PTPN4-204ENST00000431283 NPCDR1Q9BY65 106 aa2.16□□□□□ -2.06
PTPN4-204ENST00000431283 DPH3P1Q9H4G8 78 aa2.16□□□□□ -2.06
PTPN4-204ENST00000431283 TREM1Q9NP99 234 aa2.16□□□□□ -2.06
PTPN4-204ENST00000431283 LYRM2Q9NU23 88 aaPredicted RBP2.16□□□□□ -2.06
PTPN4-204ENST00000431283 FLVCR2Q9UPI3 526 aa2.16□□□□□ -2.06
PTPN4-204ENST00000431283 FAT3Q8TDW7 4589 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 A0A087WX48 190 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 IGHV3-73A0A0B4J1V6 119 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 A0A0D9SG52 128 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 RNF222A6NCQ9 220 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 PGPA6NDG6 321 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 CCDC160A6NGH7 325 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 K7EQM0 130 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 TAAR5O14804 337 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 RPL37AP61513 92 aaKnown RBP2.15□□□□□ -2.07
PTPN4-204ENST00000431283 UBE2L3P68036 154 aaKnown RBP2.15□□□□□ -2.07
PTPN4-204ENST00000431283 Q0VG73 95 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 KHDC3LQ587J8 217 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 GCSAMLQ5JQS6 135 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 CFAP126Q5VTH2 177 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 MIR17HGQ75NE6 70 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 C15orf54Q8N8G6 183 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 OR10G9Q8NGN4 311 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 CIRBP-AS1Q8TBR5 109 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 FXYD5Q96DB9 178 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 FAM167A-AS1Q96KT0 104 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 OTORQ9NRC9 128 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 RPH3ALQ9UNE2 315 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 V9GYH0 126 aa2.15□□□□□ -2.07
PTPN4-204ENST00000431283 SERTM2A0A1B0GWG4 89 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 A0A1W2PPV4 95 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 IGSF23A1L1A6 192 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 A8MWV9 139 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 TMEM262E9PQX1 116 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 TYMSP04818 313 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 S100A4P26447 101 aaKnown RBP2.14□□□□□ -2.07
PTPN4-204ENST00000431283 UBE2AP49459 152 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 MEF2BQ02080 365 aaPredicted RBP2.14□□□□□ -2.07
PTPN4-204ENST00000431283 WFDC2Q14508 124 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 LGALSLQ3ZCW2 172 aaPredicted RBP2.14□□□□□ -2.07
PTPN4-204ENST00000431283 LINC01620Q4KN68 170 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 GOLT1AQ6ZVE7 132 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 DAZ4Q86SG3 579 aaKnown RBP2.14□□□□□ -2.07
PTPN4-204ENST00000431283 ARL6IP6Q8N6S5 226 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.14□□□□□ -2.07
PTPN4-204ENST00000431283 OR5C1Q8NGR4 320 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 SCGB1C1Q8TD33 95 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 PTH2Q96A98 100 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 UBE2WQ96B02 151 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 DPH3Q96FX2 82 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 ZC2HC1AQ96GY0 325 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 CHCHD7Q9BUK0 85 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 OR5AC2Q9NZP5 309 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 LRP2P98164 4655 aa2.14□□□□□ -2.07
PTPN4-204ENST00000431283 TRAV6A0A075B6T7 132 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 F6UZH7 168 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 LYRM1O43325 122 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 GCGP01275 180 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 CRPP02741 224 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 TCRBP04435 133 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 PET100P0DJ07 73 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 CXCL5P42830 114 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 KRTAP10-4P60372 401 aaPredicted RBP2.13□□□□□ -2.07
PTPN4-204ENST00000431283 PKIAP61925 76 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 COX19Q49B96 90 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 SMUG1Q53HV7 270 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 SAPCD1Q5SSQ6 148 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 Q6ZRU5 148 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 NIT1Q86X76 327 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 LINC01561Q8N1V8 128 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 OR2T35Q8NGX2 323 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 OR2G3Q8NGZ4 309 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 WDR61Q9GZS3 305 aaKnown RBP2.13□□□□□ -2.07
PTPN4-204ENST00000431283 NUDT15Q9NV35 164 aa2.13□□□□□ -2.07
PTPN4-204ENST00000431283 TRBV10-1A0A0K0K1A3 114 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 FAM240BA0A1B0GVZ2 78 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 ANGP03950 147 aaKnown RBP2.12□□□□□ -2.07
PTPN4-204ENST00000431283 IL7P13232 177 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 BTCP35070 178 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 ASIPP42127 132 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 CACNG7P62955 275 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 DNLZQ5SXM8 178 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 DPPA3Q6W0C5 159 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 C5orf17Q8NAS9 161 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 SEC22CQ9BRL7 303 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 C11orf1Q9H5F2 150 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 PSG8Q9UQ74 426 aa2.12□□□□□ -2.07
PTPN4-204ENST00000431283 TRBV7-3A0A075B6L6 115 aa2.11□□□□□ -2.07
PTPN4-204ENST00000431283 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.11□□□□□ -2.07
PTPN4-204ENST00000431283 FABP5P3A8MUU1 101 aa2.11□□□□□ -2.07
PTPN4-204ENST00000431283 B4DEV8 164 aa2.11□□□□□ -2.07
PTPN4-204ENST00000431283 IFNA7P01567 189 aa2.11□□□□□ -2.07
PTPN4-204ENST00000431283 HLA-DQA1P01909 254 aa2.11□□□□□ -2.07
PTPN4-204ENST00000431283 TCRAP04437 139 aa2.11□□□□□ -2.07
PTPN4-204ENST00000431283 LINC00694P0DN24 101 aa2.11□□□□□ -2.07
PTPN4-204ENST00000431283 RNASE3P12724 160 aaKnown RBP2.11□□□□□ -2.07
PTPN4-204ENST00000431283 GNG5P63218 68 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms