RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 KIAA1549Q9HCM3 1950 aa9.91□□□□□ -0.82
SPG11-202ENST00000427534 C11orf86A6NJI1 115 aa9.91□□□□□ -0.82
SPG11-202ENST00000427534 WFDC10BQ8IUB3 73 aa9.91□□□□□ -0.82
SPG11-202ENST00000427534 K7EMT4 169 aa9.91□□□□□ -0.82
SPG11-202ENST00000427534 IGLV9-49A0A0B4J1Y8 123 aa9.91□□□□□ -0.82
SPG11-202ENST00000427534 CLUHP3Q96NS8 147 aa9.91□□□□□ -0.82
SPG11-202ENST00000427534 UBE2D4Q9Y2X8 147 aa9.91□□□□□ -0.82
SPG11-202ENST00000427534 COL4A4P53420 1690 aaPredicted RBP9.9□□□□□ -0.82
SPG11-202ENST00000427534 DEFB114Q30KQ6 69 aa9.9□□□□□ -0.82
SPG11-202ENST00000427534 KIAA1549LQ6ZVL6 1849 aa9.9□□□□□ -0.82
SPG11-202ENST00000427534 EDN2P20800 178 aa9.9□□□□□ -0.82
SPG11-202ENST00000427534 P0C879 139 aa9.9□□□□□ -0.83
SPG11-202ENST00000427534 SS18L2Q9UHA2 77 aa9.9□□□□□ -0.83
SPG11-202ENST00000427534 PCDH15Q96QU1 1955 aa9.89□□□□□ -0.83
SPG11-202ENST00000427534 TOMM6Q96B49 74 aa9.89□□□□□ -0.83
SPG11-202ENST00000427534 LGALS9O00182 355 aa9.89□□□□□ -0.83
SPG11-202ENST00000427534 TNFRSF13BO14836 293 aaPredicted RBP9.89□□□□□ -0.83
SPG11-202ENST00000427534 PKIGQ9Y2B9 76 aa9.89□□□□□ -0.83
SPG11-202ENST00000427534 KIR2DL5BA0A0G2JN68 375 aa9.89□□□□□ -0.83
SPG11-202ENST00000427534 KIR2DL5BA0A0G2JPC4 375 aa9.89□□□□□ -0.83
SPG11-202ENST00000427534 KIR2DL5AQ8N109 375 aa9.89□□□□□ -0.83
SPG11-202ENST00000427534 TRBV10-1A0A0K0K1A3 114 aa9.89□□□□□ -0.83
SPG11-202ENST00000427534 Q6ZPA2 131 aa9.89□□□□□ -0.83
SPG11-202ENST00000427534 BRI3O95415 125 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 COX7BP24311 80 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 FXYD2P54710 66 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 ZFAND2AQ8N6M9 145 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 IL17DQ8TAD2 202 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 A8MZ25 164 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 SHISA2Q6UWI4 295 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 FREM1Q5H8C1 2179 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 CUL9Q8IWT3 2517 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 INSL3P51460 131 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 LINC01545Q5VT33 79 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 MED12LQ86YW9 2145 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 DSCAMO60469 2012 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 TMEM89A2RUT3 159 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 TTC28Q96AY4 2481 aa9.88□□□□□ -0.83
SPG11-202ENST00000427534 CRIP3Q6Q6R5 217 aa9.87□□□□□ -0.83
SPG11-202ENST00000427534 NUP210LQ5VU65 1888 aa9.87□□□□□ -0.83
SPG11-202ENST00000427534 BRWD1-AS2P59051 145 aa9.87□□□□□ -0.83
SPG11-202ENST00000427534 CASC2Q6XLA1 102 aa9.87□□□□□ -0.83
SPG11-202ENST00000427534 LTBP2Q14767 1821 aa9.87□□□□□ -0.83
SPG11-202ENST00000427534 PSMB8P28062 276 aa9.87□□□□□ -0.83
SPG11-202ENST00000427534 LINC00574Q9H8X3 128 aa9.87□□□□□ -0.83
SPG11-202ENST00000427534 WNK1Q9H4A3 2382 aa9.87□□□□□ -0.83
SPG11-202ENST00000427534 BDP1A6H8Y1 2624 aa9.87□□□□□ -0.83
SPG11-202ENST00000427534 PIK3CD-AS1Q5SR53 167 aa9.86□□□□□ -0.83
SPG11-202ENST00000427534 CEP192Q8TEP8 1941 aa9.86□□□□□ -0.83
SPG11-202ENST00000427534 IGLV2-8P01709 118 aa9.86□□□□□ -0.83
SPG11-202ENST00000427534 MP68P56378 58 aa9.86□□□□□ -0.83
SPG11-202ENST00000427534 PTH2Q96A98 100 aa9.86□□□□□ -0.83
SPG11-202ENST00000427534 MLST8Q9BVC4 326 aa9.86□□□□□ -0.83
SPG11-202ENST00000427534 ODF3BA8MYP8 253 aa9.86□□□□□ -0.83
SPG11-202ENST00000427534 PRO3102Q9H379 93 aa9.86□□□□□ -0.83
SPG11-202ENST00000427534 TP73-AS1Q9UF72 201 aa9.85□□□□□ -0.83
SPG11-202ENST00000427534 LINC00322Q6ZN03 302 aaPredicted RBP9.85□□□□□ -0.83
SPG11-202ENST00000427534 CTRLP40313 264 aa9.85□□□□□ -0.83
SPG11-202ENST00000427534 UBE2D3P61077 147 aa9.84□□□□□ -0.83
SPG11-202ENST00000427534 MED14OSP0DP75 135 aa9.84□□□□□ -0.83
SPG11-202ENST00000427534 C3orf84H3BNL1 204 aa9.84□□□□□ -0.83
SPG11-202ENST00000427534 LINC01006Q8NI28 216 aa9.84□□□□□ -0.83
SPG11-202ENST00000427534 TRAV23DV6A0A075B6W5 121 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 C19orf71A6NCJ1 209 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 B5MCH6 92 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 IGLV2-11P01706 119 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 TRBV10-2A0A0K0K1G8 114 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 SEC61GP60059 68 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 WFDC2Q14508 124 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 LRRC75A-AS1Q8N1F1 130 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 C7orf33Q8WU49 177 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
SPG11-202ENST00000427534 HIVEP2P31629 2446 aa9.82□□□□□ -0.84
SPG11-202ENST00000427534 FAM236AA0A1B0GUQ0 79 aa9.82□□□□□ -0.84
SPG11-202ENST00000427534 FAM236BA0A1B0GV22 79 aa9.82□□□□□ -0.84
SPG11-202ENST00000427534 KPRPQ5T749 579 aaPredicted RBP9.82□□□□□ -0.84
SPG11-202ENST00000427534 ZNF702PQ9H963 129 aa9.82□□□□□ -0.84
SPG11-202ENST00000427534 SVIPQ8NHG7 77 aa9.82□□□□□ -0.84
SPG11-202ENST00000427534 PTPN13Q12923 2485 aa9.82□□□□□ -0.84
SPG11-202ENST00000427534 IGHV1-58A0A0C4DH39 117 aa9.82□□□□□ -0.84
SPG11-202ENST00000427534 C1orf158Q8N1D5 194 aa9.82□□□□□ -0.84
SPG11-202ENST00000427534 C14orf177Q52M58 125 aa9.81□□□□□ -0.84
SPG11-202ENST00000427534 ZNF295-AS1Q8N0V1 137 aa9.81□□□□□ -0.84
SPG11-202ENST00000427534 PCNX3Q9H6A9 2034 aa9.81□□□□□ -0.84
SPG11-202ENST00000427534 GOLGB1Q14789 3259 aaKnown RBP9.81□□□□□ -0.84
SPG11-202ENST00000427534 CFAP126Q5VTH2 177 aa9.8□□□□□ -0.84
SPG11-202ENST00000427534 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
SPG11-202ENST00000427534 PRR14LQ5THK1 2151 aa9.79□□□□□ -0.84
SPG11-202ENST00000427534 EIF4EBP1Q13541 118 aaPredicted RBP9.79□□□□□ -0.84
SPG11-202ENST00000427534 H0YGX0 51 aa9.79□□□□□ -0.84
SPG11-202ENST00000427534 TRAV10A0A0B4J240 114 aa9.79□□□□□ -0.84
SPG11-202ENST00000427534 TEX49A0A1B0GTD5 131 aa9.79□□□□□ -0.84
SPG11-202ENST00000427534 MPLKIPQ8TAP9 179 aa9.79□□□□□ -0.84
SPG11-202ENST00000427534 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
SPG11-202ENST00000427534 LINC01620Q4KN68 170 aa9.78□□□□□ -0.84
SPG11-202ENST00000427534 CDKN2A-AS1Q9UH64 79 aa9.78□□□□□ -0.84
SPG11-202ENST00000427534 CRYGBP07316 175 aa9.78□□□□□ -0.84
SPG11-202ENST00000427534 LYRM9A8MSI8 78 aa9.78□□□□□ -0.84
SPG11-202ENST00000427534 ARHGAP32A7KAX9 2087 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms