RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 BLCAPP62952 87 aa11.03□□□□□ -0.64
PTPN13-203ENST00000427191 DHRS4-AS1Q9P1J3 65 aa11.03□□□□□ -0.64
PTPN13-203ENST00000427191 LY6G6EA0A0G2JKS1 128 aa11.02□□□□□ -0.64
PTPN13-203ENST00000427191 PATE2Q6UY27 113 aa11.02□□□□□ -0.64
PTPN13-203ENST00000427191 U3KQA8 63 aa11.02□□□□□ -0.64
PTPN13-203ENST00000427191 TEX49A0A1B0GTD5 131 aa11.02□□□□□ -0.65
PTPN13-203ENST00000427191 A0A1B0GXF2 115 aa11.02□□□□□ -0.65
PTPN13-203ENST00000427191 CDPF1Q6NVV7 123 aa11.02□□□□□ -0.65
PTPN13-203ENST00000427191 IGFL2Q6UWQ7 119 aa11.02□□□□□ -0.65
PTPN13-203ENST00000427191 A6NED7 52 aa11.01□□□□□ -0.65
PTPN13-203ENST00000427191 REG3AQ06141 175 aa11.01□□□□□ -0.65
PTPN13-203ENST00000427191 LOXL1Q08397 574 aaPredicted RBP11.01□□□□□ -0.65
PTPN13-203ENST00000427191 SDIM1Q6ZPB5 146 aa11.01□□□□□ -0.65
PTPN13-203ENST00000427191 RNF138Q8WVD3 245 aa11.01□□□□□ -0.65
PTPN13-203ENST00000427191 SPRY2O43597 315 aa11□□□□□ -0.65
PTPN13-203ENST00000427191 PIK3CD-AS1Q5SR53 167 aa11□□□□□ -0.65
PTPN13-203ENST00000427191 DAZAP2Q15038 168 aaPredicted RBP11□□□□□ -0.65
PTPN13-203ENST00000427191 PTPN13Q12923 2485 aa11□□□□□ -0.65
PTPN13-203ENST00000427191 DEFB135Q30KP9 77 aa10.99□□□□□ -0.65
PTPN13-203ENST00000427191 PIP4P1Q86T03 277 aa10.99□□□□□ -0.65
PTPN13-203ENST00000427191 NEXN-AS1Q8NBZ9 246 aa10.99□□□□□ -0.65
PTPN13-203ENST00000427191 ACACBO00763 2458 aa10.99□□□□□ -0.65
PTPN13-203ENST00000427191 NUPR1O60356 82 aa10.99□□□□□ -0.65
PTPN13-203ENST00000427191 IGHV4-38-2P0DP08 117 aa10.99□□□□□ -0.65
PTPN13-203ENST00000427191 COX17Q14061 63 aa10.99□□□□□ -0.65
PTPN13-203ENST00000427191 ENHOQ6UWT2 76 aa10.99□□□□□ -0.65
PTPN13-203ENST00000427191 C11orf45Q8TAV5 145 aa10.98□□□□□ -0.65
PTPN13-203ENST00000427191 OTOGLQ3ZCN5 2332 aa10.98□□□□□ -0.65
PTPN13-203ENST00000427191 Q8N9L7 120 aa10.97□□□□□ -0.65
PTPN13-203ENST00000427191 C7orf33Q8WU49 177 aa10.97□□□□□ -0.65
PTPN13-203ENST00000427191 IGHV4-61A0A0C4DH41 118 aa10.97□□□□□ -0.65
PTPN13-203ENST00000427191 TMEM223A0PJW6 202 aa10.97□□□□□ -0.65
PTPN13-203ENST00000427191 TP73-AS1Q9UF72 201 aa10.96□□□□□ -0.65
PTPN13-203ENST00000427191 IGLV1-47P01700 117 aa10.96□□□□□ -0.65
PTPN13-203ENST00000427191 NAV3Q8IVL0 2385 aa10.96□□□□□ -0.66
PTPN13-203ENST00000427191 MAP6D1Q9H9H5 199 aa10.96□□□□□ -0.66
PTPN13-203ENST00000427191 LINC00308Q8TCZ7 52 aa10.96□□□□□ -0.66
PTPN13-203ENST00000427191 MT-ATP8P03928 68 aa10.95□□□□□ -0.66
PTPN13-203ENST00000427191 HIGD2AQ9BW72 106 aa10.95□□□□□ -0.66
PTPN13-203ENST00000427191 LINC00269Q8N2A0 174 aa10.95□□□□□ -0.66
PTPN13-203ENST00000427191 CHCHD10Q8WYQ3 142 aaPredicted RBP10.95□□□□□ -0.66
PTPN13-203ENST00000427191 PRAC2D3DTV9 90 aa10.94□□□□□ -0.66
PTPN13-203ENST00000427191 LRRC75A-AS1Q8N1F1 130 aa10.94□□□□□ -0.66
PTPN13-203ENST00000427191 MUC4Q99102 2169 aa10.94□□□□□ -0.66
PTPN13-203ENST00000427191 HILS1P60008 231 aa10.94□□□□□ -0.66
PTPN13-203ENST00000427191 CCKP06307 115 aa10.94□□□□□ -0.66
PTPN13-203ENST00000427191 CRYGDP07320 174 aa10.94□□□□□ -0.66
PTPN13-203ENST00000427191 IGHV4-30-2A0A087WSY4 118 aa10.94□□□□□ -0.66
PTPN13-203ENST00000427191 FSTL3O95633 263 aa10.94□□□□□ -0.66
PTPN13-203ENST00000427191 PYGO1Q9Y3Y4 419 aa10.94□□□□□ -0.66
PTPN13-203ENST00000427191 WFDC10BQ8IUB3 73 aa10.93□□□□□ -0.66
PTPN13-203ENST00000427191 LINC01548A6NM66 108 aa10.93□□□□□ -0.66
PTPN13-203ENST00000427191 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
PTPN13-203ENST00000427191 GPR179Q6PRD1 2367 aa10.93□□□□□ -0.66
PTPN13-203ENST00000427191 RITA1Q96K30 269 aa10.93□□□□□ -0.66
PTPN13-203ENST00000427191 LINC00574Q9H8X3 128 aa10.93□□□□□ -0.66
PTPN13-203ENST00000427191 WT1P19544 449 aaPredicted RBP10.93□□□□□ -0.66
PTPN13-203ENST00000427191 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
PTPN13-203ENST00000427191 LINC00474Q9P2X8 69 aa10.92□□□□□ -0.66
PTPN13-203ENST00000427191 COX7CP15954 63 aa10.92□□□□□ -0.66
PTPN13-203ENST00000427191 PTH2Q96A98 100 aa10.92□□□□□ -0.66
PTPN13-203ENST00000427191 U3KQK5 164 aa10.92□□□□□ -0.66
PTPN13-203ENST00000427191 UBE2D2P62837 147 aa10.91□□□□□ -0.66
PTPN13-203ENST00000427191 A0A087WZ39 114 aa10.91□□□□□ -0.66
PTPN13-203ENST00000427191 TRIAP1O43715 76 aa10.91□□□□□ -0.66
PTPN13-203ENST00000427191 MIFP14174 115 aa10.91□□□□□ -0.66
PTPN13-203ENST00000427191 FBXL19-AS1Q494R0 122 aa10.91□□□□□ -0.66
PTPN13-203ENST00000427191 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
PTPN13-203ENST00000427191 ODF3L1Q8IXM7 274 aa10.91□□□□□ -0.66
PTPN13-203ENST00000427191 MUC6Q6W4X9 2439 aa10.9□□□□□ -0.66
PTPN13-203ENST00000427191 SIRPDQ9H106 197 aa10.9□□□□□ -0.66
PTPN13-203ENST00000427191 A0A0U1RQV1 116 aa10.9□□□□□ -0.66
PTPN13-203ENST00000427191 LINC00322Q6ZN03 302 aaPredicted RBP10.9□□□□□ -0.67
PTPN13-203ENST00000427191 Q6Q795 121 aa10.9□□□□□ -0.67
PTPN13-203ENST00000427191 LINC00467Q9BRT7 94 aa10.9□□□□□ -0.67
PTPN13-203ENST00000427191 TTTY13Q9BZ97 58 aa10.9□□□□□ -0.67
PTPN13-203ENST00000427191 C1orf195Q5TG92 126 aa10.89□□□□□ -0.67
PTPN13-203ENST00000427191 C9orf85Q96MD7 179 aa10.89□□□□□ -0.67
PTPN13-203ENST00000427191 SMIM26A0A096LP01 95 aa10.89□□□□□ -0.67
PTPN13-203ENST00000427191 IGLV2-14P01704 120 aa10.89□□□□□ -0.67
PTPN13-203ENST00000427191 IGLV4-3A0A075B6K6 122 aa10.88□□□□□ -0.67
PTPN13-203ENST00000427191 IGKV2-24A0A0C4DH68 120 aa10.88□□□□□ -0.67
PTPN13-203ENST00000427191 A6NDX4 124 aa10.88□□□□□ -0.67
PTPN13-203ENST00000427191 TNFRSF13BO14836 293 aaPredicted RBP10.88□□□□□ -0.67
PTPN13-203ENST00000427191 M0R378 163 aa10.88□□□□□ -0.67
PTPN13-203ENST00000427191 TRBV6-8A0A0A6YYG3 113 aa10.88□□□□□ -0.67
PTPN13-203ENST00000427191 IGF1P05019 195 aa10.88□□□□□ -0.67
PTPN13-203ENST00000427191 TECTAO75443 2155 aa10.87□□□□□ -0.67
PTPN13-203ENST00000427191 TET2Q6N021 2002 aaPredicted RBP10.87□□□□□ -0.67
PTPN13-203ENST00000427191 RNF185Q96GF1 192 aa10.87□□□□□ -0.67
PTPN13-203ENST00000427191 ZNF22P17026 224 aaPredicted RBP10.87□□□□□ -0.67
PTPN13-203ENST00000427191 CACNA1AO00555 2505 aa10.87□□□□□ -0.67
PTPN13-203ENST00000427191 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.87□□□□□ -0.67
PTPN13-203ENST00000427191 C11orf1Q9H5F2 150 aa10.87□□□□□ -0.67
PTPN13-203ENST00000427191 P0C879 139 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 ESM1Q9NQ30 184 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 LST1O00453 97 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 IGKV1D-37A0A075B6S9 117 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 PLA2G5P39877 138 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 TRBV27A0A0K0K1C4 114 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms