RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 MT1HL1P0DM35 61 aa6.4□□□□□ -1.38
GACAT3-201ENST00000426539 RPS20P60866 119 aaKnown RBP6.4□□□□□ -1.38
GACAT3-201ENST00000426539 CACNG7P62955 275 aa6.4□□□□□ -1.38
GACAT3-201ENST00000426539 RASL11AQ6T310 242 aa6.4□□□□□ -1.38
GACAT3-201ENST00000426539 LYZL1Q6UWQ5 148 aa6.4□□□□□ -1.38
GACAT3-201ENST00000426539 CLRN3Q8NCR9 226 aa6.4□□□□□ -1.38
GACAT3-201ENST00000426539 TMEM243Q9BU79 118 aa6.4□□□□□ -1.38
GACAT3-201ENST00000426539 TRAV8-4A0A0B4J246 113 aa6.39□□□□□ -1.39
GACAT3-201ENST00000426539 hDV102S1A0JD36 115 aa6.39□□□□□ -1.39
GACAT3-201ENST00000426539 H7C1H1 209 aa6.39□□□□□ -1.39
GACAT3-201ENST00000426539 P01737 135 aa6.39□□□□□ -1.39
GACAT3-201ENST00000426539 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
GACAT3-201ENST00000426539 RAB5CP51148 216 aa6.39□□□□□ -1.39
GACAT3-201ENST00000426539 EIF5AP63241 154 aaKnown RBP6.39□□□□□ -1.39
GACAT3-201ENST00000426539 SRSF3P84103 164 aaKnown RBP6.39□□□□□ -1.39
GACAT3-201ENST00000426539 PGLYRP4Q96LB8 373 aa6.39□□□□□ -1.39
GACAT3-201ENST00000426539 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
GACAT3-201ENST00000426539 PLA2G2DQ9UNK4 145 aa6.39□□□□□ -1.39
GACAT3-201ENST00000426539 F2Z2F3 143 aa6.38□□□□□ -1.39
GACAT3-201ENST00000426539 NTF3P20783 257 aa6.38□□□□□ -1.39
GACAT3-201ENST00000426539 GNG4P50150 75 aa6.38□□□□□ -1.39
GACAT3-201ENST00000426539 C9orf62Q8N4C0 152 aa6.38□□□□□ -1.39
GACAT3-201ENST00000426539 SMIM12Q96EX1 92 aa6.38□□□□□ -1.39
GACAT3-201ENST00000426539 DPH3P1Q9H4G8 78 aa6.38□□□□□ -1.39
GACAT3-201ENST00000426539 NIT2Q9NQR4 276 aa6.38□□□□□ -1.39
GACAT3-201ENST00000426539 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
GACAT3-201ENST00000426539 A0A087WYN8 130 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 IFNA1P01562 189 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 TRGC1P0CF51 173 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 CTRLP40313 264 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 SULT1A2P50226 295 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 MEF2BQ02080 365 aaPredicted RBP6.37□□□□□ -1.39
GACAT3-201ENST00000426539 C15orf56Q8N910 161 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 NUDT10Q8NFP7 164 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 SPACA4Q8TDM5 124 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 NUDT11Q96G61 164 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 MED9Q9NWA0 146 aa6.37□□□□□ -1.39
GACAT3-201ENST00000426539 IGHV3-64A0A075B6Q5 118 aa6.36□□□□□ -1.39
GACAT3-201ENST00000426539 TRAV26-2A0A0B4J265 109 aa6.36□□□□□ -1.39
GACAT3-201ENST00000426539 PDE6DO43924 150 aa6.36□□□□□ -1.39
GACAT3-201ENST00000426539 AMTP48728 403 aa6.36□□□□□ -1.39
GACAT3-201ENST00000426539 WDR73Q6P4I2 378 aa6.36□□□□□ -1.39
GACAT3-201ENST00000426539 GATD1Q8NB37 220 aa6.36□□□□□ -1.39
GACAT3-201ENST00000426539 CNFNQ9BYD5 112 aa6.36□□□□□ -1.39
GACAT3-201ENST00000426539 XKRY2A2RUG3 117 aa6.35□□□□□ -1.39
GACAT3-201ENST00000426539 GAGE12HA6NDE8 117 aa6.35□□□□□ -1.39
GACAT3-201ENST00000426539 K7EN84 100 aa6.35□□□□□ -1.39
GACAT3-201ENST00000426539 BCL2P10415 239 aa6.35□□□□□ -1.39
GACAT3-201ENST00000426539 FOXA3P55318 350 aaPredicted RBP6.35□□□□□ -1.39
GACAT3-201ENST00000426539 COTL1Q14019 142 aa6.35□□□□□ -1.39
GACAT3-201ENST00000426539 Q6ZRU5 148 aa6.35□□□□□ -1.39
GACAT3-201ENST00000426539 TCTE3Q8IZS6 198 aa6.35□□□□□ -1.39
GACAT3-201ENST00000426539 UBE2L6O14933 153 aa6.34□□□□□ -1.39
GACAT3-201ENST00000426539 TWIST1Q15672 202 aa6.34□□□□□ -1.39
GACAT3-201ENST00000426539 GTSF1Q8WW33 167 aa6.34□□□□□ -1.39
GACAT3-201ENST00000426539 RPL39LQ96EH5 51 aaKnown RBP6.34□□□□□ -1.39
GACAT3-201ENST00000426539 RNF185Q96GF1 192 aa6.34□□□□□ -1.39
GACAT3-201ENST00000426539 RNASE7Q9H1E1 156 aaKnown RBP6.34□□□□□ -1.39
GACAT3-201ENST00000426539 RPP21Q9H633 154 aaKnown RBP6.34□□□□□ -1.39
GACAT3-201ENST00000426539 PLAC8Q9NZF1 115 aa6.34□□□□□ -1.39
GACAT3-201ENST00000426539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.33□□□□□ -1.4
GACAT3-201ENST00000426539 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.33□□□□□ -1.4
GACAT3-201ENST00000426539 IGKV3OR2-268A0A0C4DH90 116 aa6.33□□□□□ -1.4
GACAT3-201ENST00000426539 IGKV2-29A2NJV5 120 aaPredicted RBP6.33□□□□□ -1.4
GACAT3-201ENST00000426539 TEX46H3BTG2 121 aa6.33□□□□□ -1.4
GACAT3-201ENST00000426539 PHOX2AO14813 284 aa6.33□□□□□ -1.4
GACAT3-201ENST00000426539 COX6A2Q02221 97 aa6.33□□□□□ -1.4
GACAT3-201ENST00000426539 HIGD2BQ4VC39 106 aa6.33□□□□□ -1.4
GACAT3-201ENST00000426539 EIF5AL1Q6IS14 154 aaKnown RBP6.33□□□□□ -1.4
GACAT3-201ENST00000426539 PRSS3P2Q8NHM4 247 aa6.33□□□□□ -1.4
GACAT3-201ENST00000426539 OCC1Q8TAD7 63 aa6.33□□□□□ -1.4
GACAT3-201ENST00000426539 DPH3Q96FX2 82 aa6.33□□□□□ -1.4
GACAT3-201ENST00000426539 BIN3Q9NQY0 253 aa6.33□□□□□ -1.4
GACAT3-201ENST00000426539 CHCHD10Q8WYQ3 142 aaPredicted RBP6.32□□□□□ -1.4
GACAT3-201ENST00000426539 FAM231BA6NCW3 169 aa6.31□□□□□ -1.4
GACAT3-201ENST00000426539 GAS8-AS1O95177 125 aa6.31□□□□□ -1.4
GACAT3-201ENST00000426539 NCR2O95944 276 aa6.31□□□□□ -1.4
GACAT3-201ENST00000426539 FGF6P10767 208 aa6.31□□□□□ -1.4
GACAT3-201ENST00000426539 RPS10P46783 165 aaKnown RBP6.31□□□□□ -1.4
GACAT3-201ENST00000426539 FOXI1Q12951 378 aa6.31□□□□□ -1.4
GACAT3-201ENST00000426539 CFAP161Q6P656 301 aa6.31□□□□□ -1.4
GACAT3-201ENST00000426539 GVQW2A0A096LPI5 108 aaPredicted RBP6.3□□□□□ -1.4
GACAT3-201ENST00000426539 SDHAF1A6NFY7 115 aa6.3□□□□□ -1.4
GACAT3-201ENST00000426539 NDUFS6O75380 124 aaKnown RBP6.3□□□□□ -1.4
GACAT3-201ENST00000426539 LINC00310P59036 64 aa6.3□□□□□ -1.4
GACAT3-201ENST00000426539 MAJINQ3KP22 176 aa6.3□□□□□ -1.4
GACAT3-201ENST00000426539 AMMECR1LQ6DCA0 310 aa6.3□□□□□ -1.4
GACAT3-201ENST00000426539 RNASEKQ6P5S7 137 aaKnown RBP6.3□□□□□ -1.4
GACAT3-201ENST00000426539 SLC51BQ86UW2 128 aa6.3□□□□□ -1.4
GACAT3-201ENST00000426539 CDIP1Q9H305 208 aa6.3□□□□□ -1.4
GACAT3-201ENST00000426539 A0A096LNI7 61 aa6.29□□□□□ -1.4
GACAT3-201ENST00000426539 IGKV2-24A0A0C4DH68 120 aa6.29□□□□□ -1.4
GACAT3-201ENST00000426539 H7C423 109 aa6.29□□□□□ -1.4
GACAT3-201ENST00000426539 APCSP02743 223 aa6.29□□□□□ -1.4
GACAT3-201ENST00000426539 TAGLN2P37802 199 aaKnown RBP6.29□□□□□ -1.4
GACAT3-201ENST00000426539 TRBV6-5A0A0K0K1A5 114 aa6.28□□□□□ -1.4
GACAT3-201ENST00000426539 TSHBP01222 138 aa6.28□□□□□ -1.4
GACAT3-201ENST00000426539 ESDP10768 282 aa6.28□□□□□ -1.4
GACAT3-201ENST00000426539 PRR3P79522 188 aaKnown RBP6.28□□□□□ -1.4
GACAT3-201ENST00000426539 ODF1Q14990 250 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms