RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 S100PP25815 95 aa3.9□□□□□ -1.79
HERPUD2-204ENST00000426180 CCL18P55774 89 aa3.9□□□□□ -1.79
HERPUD2-204ENST00000426180 ELOBQ15370 118 aa3.9□□□□□ -1.79
HERPUD2-204ENST00000426180 OR10J3Q5JRS4 329 aa3.9□□□□□ -1.79
HERPUD2-204ENST00000426180 NTM-AS1Q6ZSK4 140 aa3.9□□□□□ -1.79
HERPUD2-204ENST00000426180 WFDC10BQ8IUB3 73 aa3.9□□□□□ -1.79
HERPUD2-204ENST00000426180 GTSF1LQ9H1H1 148 aa3.9□□□□□ -1.79
HERPUD2-204ENST00000426180 NIT2Q9NQR4 276 aa3.9□□□□□ -1.79
HERPUD2-204ENST00000426180 TNFRSF18Q9Y5U5 241 aa3.9□□□□□ -1.79
HERPUD2-204ENST00000426180 TRAV9-1A0A075B6T8 112 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 D6R8Y8 96 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 H7C1H1 209 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 M0R2N4 97 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 NPYP01303 97 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 S100A8P05109 93 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 TIRAPP58753 221 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 SH2D6Q7Z4S9 175 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 MRAP2Q96G30 205 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 DNAJC30Q96LL9 226 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 UPK3BQ9BT76 320 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 Q9H8V8 135 aa3.89□□□□□ -1.79
HERPUD2-204ENST00000426180 TRBV6-5A0A0K0K1A5 114 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 SDHAF1A6NFY7 115 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 TNFRSF6BO95407 300 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 TSHBP01222 138 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 APCSP02743 223 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 CKS2P33552 79 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 POLR2KP53803 58 aaKnown RBP3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 LELP1Q5T871 98 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 FRZBQ92765 325 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 PRELID3AQ96N28 172 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 TMEM70Q9BUB7 260 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 GNB1LQ9BYB4 327 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 ST20Q9HBF5 79 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 SMCO4Q9NRQ5 59 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
HERPUD2-204ENST00000426180 TRBV24-1A0A075B6N3 115 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 TRBV6-8A0A0A6YYG3 113 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 COLCA2A8K830 154 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 SIVA1O15304 175 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 IGHV3-30P01768 117 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 IGHV3-33P01772 117 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 IGHV3-30-3P0DP02 117 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 IGHV3-30-5P0DP03 117 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 GAGE6Q13070 117 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 Q6ZR54 194 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 DAZ4Q86SG3 579 aaKnown RBP3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 ORMDL3Q8N138 153 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 DAZ3Q9NR90 486 aaKnown RBP3.87□□□□□ -1.79
HERPUD2-204ENST00000426180 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 TRAV8-6A0A0B4J262 113 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 TRBV27A0A0K0K1C4 114 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 LOC389332A0A1B0GUA5 103 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 IGKV2-29A2NJV5 120 aaPredicted RBP3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 I3L3M4 83 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 HLA-DQA1P01909 254 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 PPBPP02775 128 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 PMCHP20382 165 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 SUMO2P61956 95 aaKnown RBP3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 S100A12P80511 92 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 FABP9Q0Z7S8 132 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 COTL1Q14019 142 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 IQCJQ1A5X6 159 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 NIT1Q86X76 327 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 C20orf78Q9BR46 151 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 ALKBH7Q9BT30 221 aaPredicted RBP3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 CHCHD7Q9BUK0 85 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 TRAPPC1Q9Y5R8 145 aa3.86□□□□□ -1.79
HERPUD2-204ENST00000426180 IGHV1-24A0A0C4DH33 117 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 PRSS47A8MTI9 375 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 VCYO14598 125 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 PHOX2AO14813 284 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 TCAPO15273 167 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 PPP1R17O96001 155 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 DNAH10OSP0CZ25 163 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 ESDP10768 282 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 AMTP48728 403 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 RPL32P62910 135 aaKnown RBP3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 COX19Q49B96 90 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 MPV17L2Q567V2 206 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 LINC01556Q5JQF7 62 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 LINC00469Q8N7U9 141 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 Q8N976 141 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 TMEM243Q9BU79 118 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 SMIM2Q9BVW6 85 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 DNAH6Q9C0G6 4158 aa3.85□□□□□ -1.79
HERPUD2-204ENST00000426180 KMT2AQ03164 3969 aa3.84□□□□□ -1.79
HERPUD2-204ENST00000426180 IGLV4-60A0A075B6I1 120 aa3.84□□□□□ -1.79
HERPUD2-204ENST00000426180 TRBV25-1A0A075B6N4 114 aa3.84□□□□□ -1.79
HERPUD2-204ENST00000426180 TMEM262E9PQX1 116 aa3.84□□□□□ -1.79
HERPUD2-204ENST00000426180 RTL8CO15255 209 aa3.84□□□□□ -1.79
HERPUD2-204ENST00000426180 MT-ND6P03923 174 aa3.84□□□□□ -1.79
HERPUD2-204ENST00000426180 RAB5AP20339 215 aa3.84□□□□□ -1.79
HERPUD2-204ENST00000426180 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.79
HERPUD2-204ENST00000426180 RBX1P62877 108 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms