RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 UBE2D2P62837 147 aa9.16□□□□□ -0.94
SNX3-204ENST00000426155 ADIRFQ15847 76 aa9.16□□□□□ -0.94
SNX3-204ENST00000426155 C10orf126Q8N4M7 172 aa9.16□□□□□ -0.94
SNX3-204ENST00000426155 NEXN-AS1Q8NBZ9 246 aa9.16□□□□□ -0.94
SNX3-204ENST00000426155 IMMP2LQ96T52 175 aa9.16□□□□□ -0.94
SNX3-204ENST00000426155 HIST1H2BLQ99880 126 aa9.16□□□□□ -0.94
SNX3-204ENST00000426155 RPP21Q9H633 154 aaKnown RBP9.16□□□□□ -0.94
SNX3-204ENST00000426155 SMIM17P0DL12 118 aa9.15□□□□□ -0.94
SNX3-204ENST00000426155 RPL36AP83881 106 aaKnown RBP9.15□□□□□ -0.94
SNX3-204ENST00000426155 NFE4Q86UQ8 179 aa9.15□□□□□ -0.94
SNX3-204ENST00000426155 OR10G8Q8NGN5 311 aa9.15□□□□□ -0.94
SNX3-204ENST00000426155 RPL36ALQ969Q0 106 aaKnown RBP9.15□□□□□ -0.94
SNX3-204ENST00000426155 C14orf144Q96I85 54 aa9.15□□□□□ -0.94
SNX3-204ENST00000426155 C2orf88Q9BSF0 95 aa9.15□□□□□ -0.94
SNX3-204ENST00000426155 TRBV7-3A0A075B6L6 115 aa9.14□□□□□ -0.95
SNX3-204ENST00000426155 XKRY2A2RUG3 117 aa9.14□□□□□ -0.95
SNX3-204ENST00000426155 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
SNX3-204ENST00000426155 K7EP13 123 aa9.14□□□□□ -0.95
SNX3-204ENST00000426155 CTRLP40313 264 aa9.14□□□□□ -0.95
SNX3-204ENST00000426155 CACNG7P62955 275 aa9.14□□□□□ -0.95
SNX3-204ENST00000426155 DAZ4Q86SG3 579 aaKnown RBP9.14□□□□□ -0.95
SNX3-204ENST00000426155 DAZ3Q9NR90 486 aaKnown RBP9.14□□□□□ -0.95
SNX3-204ENST00000426155 PCLOQ9Y6V0 5065 aa9.14□□□□□ -0.95
SNX3-204ENST00000426155 ERVFC1-1P60608 527 aa9.13□□□□□ -0.95
SNX3-204ENST00000426155 RPL23P62829 140 aaKnown RBP9.13□□□□□ -0.95
SNX3-204ENST00000426155 IQCJQ1A5X6 159 aa9.13□□□□□ -0.95
SNX3-204ENST00000426155 GTSF1Q8WW33 167 aa9.13□□□□□ -0.95
SNX3-204ENST00000426155 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
SNX3-204ENST00000426155 A0A087WTM6 91 aa9.12□□□□□ -0.95
SNX3-204ENST00000426155 PHOX2AO14813 284 aa9.12□□□□□ -0.95
SNX3-204ENST00000426155 NTF3P20783 257 aa9.12□□□□□ -0.95
SNX3-204ENST00000426155 PDZD11Q5EBL8 140 aa9.12□□□□□ -0.95
SNX3-204ENST00000426155 SUMO4Q6EEV6 95 aa9.12□□□□□ -0.95
SNX3-204ENST00000426155 MRPL52Q86TS9 123 aaKnown RBP9.12□□□□□ -0.95
SNX3-204ENST00000426155 NIT1Q86X76 327 aa9.12□□□□□ -0.95
SNX3-204ENST00000426155 DNAJC30Q96LL9 226 aa9.12□□□□□ -0.95
SNX3-204ENST00000426155 F2Z2F3 143 aa9.11□□□□□ -0.95
SNX3-204ENST00000426155 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
SNX3-204ENST00000426155 M0QY20 66 aa9.1□□□□□ -0.95
SNX3-204ENST00000426155 TWIST1Q15672 202 aa9.1□□□□□ -0.95
SNX3-204ENST00000426155 FAM231DQ6ZW35 169 aa9.1□□□□□ -0.95
SNX3-204ENST00000426155 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
SNX3-204ENST00000426155 ABCA13Q86UQ4 5058 aa9.1□□□□□ -0.95
SNX3-204ENST00000426155 TRBV6-8A0A0A6YYG3 113 aa9.09□□□□□ -0.95
SNX3-204ENST00000426155 PSCAO43653 123 aa9.09□□□□□ -0.95
SNX3-204ENST00000426155 FOXA3P55318 350 aaPredicted RBP9.09□□□□□ -0.95
SNX3-204ENST00000426155 LAGE3Q14657 143 aa9.09□□□□□ -0.95
SNX3-204ENST00000426155 NTM-AS1Q6ZSK4 140 aa9.09□□□□□ -0.95
SNX3-204ENST00000426155 DEFB104AQ8WTQ1 72 aa9.09□□□□□ -0.95
SNX3-204ENST00000426155 PGLYRP4Q96LB8 373 aa9.09□□□□□ -0.95
SNX3-204ENST00000426155 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
SNX3-204ENST00000426155 DPH3P1Q9H4G8 78 aa9.09□□□□□ -0.95
SNX3-204ENST00000426155 TRAV26-2A0A0B4J265 109 aa9.08□□□□□ -0.96
SNX3-204ENST00000426155 LRCOL1A6NCL2 159 aa9.08□□□□□ -0.96
SNX3-204ENST00000426155 RAB4AP20338 218 aa9.08□□□□□ -0.96
SNX3-204ENST00000426155 WFDC2Q14508 124 aa9.08□□□□□ -0.96
SNX3-204ENST00000426155 COX19Q49B96 90 aa9.08□□□□□ -0.96
SNX3-204ENST00000426155 XP32Q5T750 250 aa9.08□□□□□ -0.96
SNX3-204ENST00000426155 KRTAP17-1Q9BYP8 105 aa9.08□□□□□ -0.96
SNX3-204ENST00000426155 KLK12Q9UKR0 248 aa9.08□□□□□ -0.96
SNX3-204ENST00000426155 A0A087WX48 190 aa9.07□□□□□ -0.96
SNX3-204ENST00000426155 A0A1B0GV90 55 aa9.07□□□□□ -0.96
SNX3-204ENST00000426155 EREGO14944 169 aa9.07□□□□□ -0.96
SNX3-204ENST00000426155 MPV17L2Q567V2 206 aa9.07□□□□□ -0.96
SNX3-204ENST00000426155 TRAPPC1Q9Y5R8 145 aa9.07□□□□□ -0.96
SNX3-204ENST00000426155 A8MWL6 223 aa9.06□□□□□ -0.96
SNX3-204ENST00000426155 H7C1H1 209 aa9.06□□□□□ -0.96
SNX3-204ENST00000426155 M0R143 59 aa9.06□□□□□ -0.96
SNX3-204ENST00000426155 CT83Q5H943 113 aa9.06□□□□□ -0.96
SNX3-204ENST00000426155 WDR73Q6P4I2 378 aa9.06□□□□□ -0.96
SNX3-204ENST00000426155 RASL11AQ6T310 242 aa9.06□□□□□ -0.96
SNX3-204ENST00000426155 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
SNX3-204ENST00000426155 TMEM262E9PQX1 116 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 LECT2O14960 151 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 TCAPO15273 167 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 GAGE6Q13070 117 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 CDPF1Q6NVV7 123 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 ZNF664Q8N3J9 261 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 MAPKAPK5-AS1Q8N8E1 139 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 Q8N976 141 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 GATD1Q8NB37 220 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 UBE2WQ96B02 151 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 OSTCQ9NRP0 149 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 DNAH8Q96JB1 4490 aa9.05□□□□□ -0.96
SNX3-204ENST00000426155 TRAV8-3A0A0A6YYJ7 113 aa9.04□□□□□ -0.96
SNX3-204ENST00000426155 HIGD1CA8MV81 97 aa9.04□□□□□ -0.96
SNX3-204ENST00000426155 SCGB1D1O95968 90 aa9.04□□□□□ -0.96
SNX3-204ENST00000426155 Q8N814 137 aa9.04□□□□□ -0.96
SNX3-204ENST00000426155 TSKUQ8WUA8 353 aa9.04□□□□□ -0.96
SNX3-204ENST00000426155 RPL39LQ96EH5 51 aaKnown RBP9.04□□□□□ -0.96
SNX3-204ENST00000426155 CHCHD7Q9BUK0 85 aa9.04□□□□□ -0.96
SNX3-204ENST00000426155 V9GYV3 84 aa9.04□□□□□ -0.96
SNX3-204ENST00000426155 TRBV25-1A0A075B6N4 114 aa9.03□□□□□ -0.96
SNX3-204ENST00000426155 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
SNX3-204ENST00000426155 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
SNX3-204ENST00000426155 TM2D2Q9BX73 214 aa9.03□□□□□ -0.96
SNX3-204ENST00000426155 IGKV2D-24A0A075B6R9 120 aa9.02□□□□□ -0.97
SNX3-204ENST00000426155 GAS8-AS1O95177 125 aa9.02□□□□□ -0.97
SNX3-204ENST00000426155 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
SNX3-204ENST00000426155 CLPSL2Q6UWE3 100 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms