RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 DNAH10OSP0CZ25 163 aa16.49■□□□□ 0.23
APOE-202ENST00000425718 AMTP48728 403 aa16.49■□□□□ 0.23
APOE-202ENST00000425718 C10orf126Q8N4M7 172 aa16.49■□□□□ 0.23
APOE-202ENST00000425718 TMEM243Q9BU79 118 aa16.49■□□□□ 0.23
APOE-202ENST00000425718 FCER1GP30273 86 aa16.48■□□□□ 0.23
APOE-202ENST00000425718 LINC01556Q5JQF7 62 aa16.48■□□□□ 0.23
APOE-202ENST00000425718 CHCHD5Q9BSY4 110 aa16.48■□□□□ 0.23
APOE-202ENST00000425718 H7C423 109 aa16.47■□□□□ 0.23
APOE-202ENST00000425718 UBE2L6O14933 153 aa16.47■□□□□ 0.23
APOE-202ENST00000425718 SMAGPQ0VAQ4 97 aa16.47■□□□□ 0.23
APOE-202ENST00000425718 WFDC10BQ8IUB3 73 aa16.47■□□□□ 0.23
APOE-202ENST00000425718 K7EMI3 77 aa16.46■□□□□ 0.23
APOE-202ENST00000425718 BTF3P20290 206 aaKnown RBP16.46■□□□□ 0.23
APOE-202ENST00000425718 KIAA1644Q3SXP7 199 aa16.46■□□□□ 0.23
APOE-202ENST00000425718 NTM-AS1Q6ZSK4 140 aa16.46■□□□□ 0.23
APOE-202ENST00000425718 NXT2Q9NPJ8 142 aaKnown RBP16.46■□□□□ 0.23
APOE-202ENST00000425718 A0A087WX48 190 aa16.45■□□□□ 0.22
APOE-202ENST00000425718 TMEM18Q96B42 140 aa16.45■□□□□ 0.22
APOE-202ENST00000425718 DNAH6Q9C0G6 4158 aa16.45■□□□□ 0.22
APOE-202ENST00000425718 NBDYA0A0U1RRE5 68 aa16.44■□□□□ 0.22
APOE-202ENST00000425718 RAB5AP20339 215 aa16.44■□□□□ 0.22
APOE-202ENST00000425718 NIT1Q86X76 327 aa16.44■□□□□ 0.22
APOE-202ENST00000425718 ALKBH7Q9BT30 221 aaPredicted RBP16.44■□□□□ 0.22
APOE-202ENST00000425718 TMEM262E9PQX1 116 aa16.43■□□□□ 0.22
APOE-202ENST00000425718 TSHBP01222 138 aa16.43■□□□□ 0.22
APOE-202ENST00000425718 Q8N8P6 123 aa16.43■□□□□ 0.22
APOE-202ENST00000425718 COLCA2A8K830 154 aa16.42■□□□□ 0.22
APOE-202ENST00000425718 IGLV2-18A0A075B6J9 118 aa16.41■□□□□ 0.22
APOE-202ENST00000425718 G0S2P27469 103 aa16.41■□□□□ 0.22
APOE-202ENST00000425718 LOC389332A0A1B0GUA5 103 aa16.4■□□□□ 0.22
APOE-202ENST00000425718 SCO1O75880 301 aa16.4■□□□□ 0.22
APOE-202ENST00000425718 A0A1B0GUV1 79 aa16.39■□□□□ 0.21
APOE-202ENST00000425718 ESDP10768 282 aa16.39■□□□□ 0.21
APOE-202ENST00000425718 ZNF25P17030 456 aaPredicted RBP16.38■□□□□ 0.21
APOE-202ENST00000425718 LAGE3Q14657 143 aa16.38■□□□□ 0.21
APOE-202ENST00000425718 ORMDL2Q53FV1 153 aa16.38■□□□□ 0.21
APOE-202ENST00000425718 PRSS3P2Q8NHM4 247 aa16.38■□□□□ 0.21
APOE-202ENST00000425718 KMT2AQ03164 3969 aa16.37■□□□□ 0.21
APOE-202ENST00000425718 SACSQ9NZJ4 4579 aa16.37■□□□□ 0.21
APOE-202ENST00000425718 GAGE6Q13070 117 aa16.37■□□□□ 0.21
APOE-202ENST00000425718 AMMECR1LQ6DCA0 310 aa16.37■□□□□ 0.21
APOE-202ENST00000425718 Q6ZR54 194 aa16.37■□□□□ 0.21
APOE-202ENST00000425718 IGHV3-30P01768 117 aa16.36■□□□□ 0.21
APOE-202ENST00000425718 IGHV3-33P01772 117 aa16.36■□□□□ 0.21
APOE-202ENST00000425718 IGHV3-30-3P0DP02 117 aa16.36■□□□□ 0.21
APOE-202ENST00000425718 IGHV3-30-5P0DP03 117 aa16.36■□□□□ 0.21
APOE-202ENST00000425718 RAB5BP61020 215 aa16.36■□□□□ 0.21
APOE-202ENST00000425718 TMEM101Q96IK0 257 aa16.35■□□□□ 0.21
APOE-202ENST00000425718 LINC01549A6NIU2 74 aa16.34■□□□□ 0.21
APOE-202ENST00000425718 MPV17L2Q567V2 206 aa16.34■□□□□ 0.21
APOE-202ENST00000425718 FA2HQ7L5A8 372 aa16.34■□□□□ 0.21
APOE-202ENST00000425718 NFE4Q86UQ8 179 aa16.34■□□□□ 0.21
APOE-202ENST00000425718 DEFB104AQ8WTQ1 72 aa16.34■□□□□ 0.21
APOE-202ENST00000425718 IBA57-AS1B1ANH7 110 aa16.33■□□□□ 0.2
APOE-202ENST00000425718 M0R2N4 97 aa16.33■□□□□ 0.2
APOE-202ENST00000425718 TRGC2P03986 189 aa16.33■□□□□ 0.2
APOE-202ENST00000425718 IFI27P40305 119 aaPredicted RBP16.33■□□□□ 0.2
APOE-202ENST00000425718 RBX1P62877 108 aa16.33■□□□□ 0.2
APOE-202ENST00000425718 Q0VG73 95 aa16.33■□□□□ 0.2
APOE-202ENST00000425718 C20orf203Q8NBC4 194 aa16.33■□□□□ 0.2
APOE-202ENST00000425718 KMT2CQ8NEZ4 4911 aaKnown RBP16.32■□□□□ 0.2
APOE-202ENST00000425718 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.32■□□□□ 0.2
APOE-202ENST00000425718 TRAV8-3A0A0A6YYJ7 113 aa16.32■□□□□ 0.2
APOE-202ENST00000425718 IGKV2-29A2NJV5 120 aaPredicted RBP16.32■□□□□ 0.2
APOE-202ENST00000425718 FGF6P10767 208 aa16.32■□□□□ 0.2
APOE-202ENST00000425718 RNASEKQ6P5S7 137 aaKnown RBP16.32■□□□□ 0.2
APOE-202ENST00000425718 MRPL52Q86TS9 123 aaKnown RBP16.32■□□□□ 0.2
APOE-202ENST00000425718 C18orf32Q8TCD1 76 aa16.32■□□□□ 0.2
APOE-202ENST00000425718 CRPP02741 224 aa16.31■□□□□ 0.2
APOE-202ENST00000425718 ANGP03950 147 aaKnown RBP16.31■□□□□ 0.2
APOE-202ENST00000425718 DGAT2L7PQ6IED9 249 aa16.31■□□□□ 0.2
APOE-202ENST00000425718 TIMM21Q9BVV7 248 aa16.31■□□□□ 0.2
APOE-202ENST00000425718 CSDC2Q9Y534 153 aaKnown RBP16.31■□□□□ 0.2
APOE-202ENST00000425718 C1orf134Q5TEV5 83 aa16.3■□□□□ 0.2
APOE-202ENST00000425718 RMI2Q96E14 147 aa16.3■□□□□ 0.2
APOE-202ENST00000425718 LINC01546A6NGU7 62 aa16.29■□□□□ 0.2
APOE-202ENST00000425718 C6orf223Q8N319 242 aa16.29■□□□□ 0.2
APOE-202ENST00000425718 OR5A1Q8NGJ0 315 aa16.29■□□□□ 0.2
APOE-202ENST00000425718 SPANXA1Q9NS26 97 aa16.29■□□□□ 0.2
APOE-202ENST00000425718 AP5S1Q9NUS5 200 aa16.29■□□□□ 0.2
APOE-202ENST00000425718 KLK12Q9UKR0 248 aa16.29■□□□□ 0.2
APOE-202ENST00000425718 CYSLTR1Q9Y271 337 aa16.29■□□□□ 0.2
APOE-202ENST00000425718 Q8N976 141 aa16.27■□□□□ 0.2
APOE-202ENST00000425718 COX11Q9Y6N1 276 aa16.27■□□□□ 0.2
APOE-202ENST00000425718 LINC00614P0C842 121 aa16.26■□□□□ 0.19
APOE-202ENST00000425718 TM2D2Q9BX73 214 aa16.26■□□□□ 0.19
APOE-202ENST00000425718 KRTAP1-5Q9BYS1 174 aa16.26■□□□□ 0.19
APOE-202ENST00000425718 NPSP0C0P6 89 aa16.25■□□□□ 0.19
APOE-202ENST00000425718 MIAQ16674 131 aa16.25■□□□□ 0.19
APOE-202ENST00000425718 Q8N3U1 123 aa16.25■□□□□ 0.19
APOE-202ENST00000425718 UBE2D4Q9Y2X8 147 aa16.25■□□□□ 0.19
APOE-202ENST00000425718 C2orf66Q6UXQ4 117 aa16.24■□□□□ 0.19
APOE-202ENST00000425718 UBE2WQ96B02 151 aa16.24■□□□□ 0.19
APOE-202ENST00000425718 CHCHD1Q96BP2 118 aaKnown RBP16.24■□□□□ 0.19
APOE-202ENST00000425718 PRR34Q9NV39 138 aa16.24■□□□□ 0.19
APOE-202ENST00000425718 PYGO1Q9Y3Y4 419 aa16.24■□□□□ 0.19
APOE-202ENST00000425718 IGLV4-60A0A075B6I1 120 aa16.23■□□□□ 0.19
APOE-202ENST00000425718 BAGE3Q86Y29 109 aa16.23■□□□□ 0.19
APOE-202ENST00000425718 TRAV8-4A0A0B4J246 113 aa16.22■□□□□ 0.19
APOE-202ENST00000425718 REG3AQ06141 175 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms