RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RPS20P60866 119 aaKnown RBP4.64□□□□□ -1.67
HMGN1-205ENST00000419378 RPL36AP83881 106 aaKnown RBP4.64□□□□□ -1.67
HMGN1-205ENST00000419378 ZNF56Q15929 161 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 AP1S3Q96PC3 154 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 TPPP3Q9BW30 176 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 BIN3Q9NQY0 253 aa4.64□□□□□ -1.67
HMGN1-205ENST00000419378 IBA57-AS1B1ANH7 110 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 TMEM250H0YL14 139 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 K7EN84 100 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 RAB4BP61018 213 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 UBE2D3P61077 147 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 SSTP61278 116 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 UBE2D2P62837 147 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 CACNG7P62955 275 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 OR10G8Q8NGN5 311 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 OCC1Q8TAD7 63 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 KIF25-AS1Q9Y6Z4 181 aa4.63□□□□□ -1.67
HMGN1-205ENST00000419378 TRBV7-3A0A075B6L6 115 aa4.62□□□□□ -1.67
HMGN1-205ENST00000419378 A0A087WTM6 91 aa4.62□□□□□ -1.67
HMGN1-205ENST00000419378 XKRY2A2RUG3 117 aa4.62□□□□□ -1.67
HMGN1-205ENST00000419378 MGPP08493 103 aa4.62□□□□□ -1.67
HMGN1-205ENST00000419378 SMIM17P0DL12 118 aa4.62□□□□□ -1.67
HMGN1-205ENST00000419378 CTRLP40313 264 aa4.62□□□□□ -1.67
HMGN1-205ENST00000419378 LAGE3Q14657 143 aa4.62□□□□□ -1.67
HMGN1-205ENST00000419378 EIF5A2Q9GZV4 153 aaKnown RBP4.62□□□□□ -1.67
HMGN1-205ENST00000419378 RNASE7Q9H1E1 156 aaKnown RBP4.62□□□□□ -1.67
HMGN1-205ENST00000419378 RPP21Q9H633 154 aaKnown RBP4.62□□□□□ -1.67
HMGN1-205ENST00000419378 Q9HAA7 133 aa4.62□□□□□ -1.67
HMGN1-205ENST00000419378 FAT1Q14517 4588 aa4.61□□□□□ -1.67
HMGN1-205ENST00000419378 F2Z2F3 143 aa4.61□□□□□ -1.67
HMGN1-205ENST00000419378 PSCAO43653 123 aa4.61□□□□□ -1.67
HMGN1-205ENST00000419378 FUSP35637 526 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGN1-205ENST00000419378 CEBPGP53567 150 aa4.61□□□□□ -1.67
HMGN1-205ENST00000419378 LYZL1Q6UWQ5 148 aa4.61□□□□□ -1.67
HMGN1-205ENST00000419378 DAZ4Q86SG3 579 aaKnown RBP4.61□□□□□ -1.67
HMGN1-205ENST00000419378 SMIM29Q86T20 159 aa4.61□□□□□ -1.67
HMGN1-205ENST00000419378 NIT1Q86X76 327 aa4.61□□□□□ -1.67
HMGN1-205ENST00000419378 FAM210AQ96ND0 272 aa4.61□□□□□ -1.67
HMGN1-205ENST00000419378 DAZ3Q9NR90 486 aaKnown RBP4.61□□□□□ -1.67
HMGN1-205ENST00000419378 TRBV6-8A0A0A6YYG3 113 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 M0QY20 66 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 NDUFS6O75380 124 aaKnown RBP4.6□□□□□ -1.67
HMGN1-205ENST00000419378 CDK2AP2O75956 126 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 TRGC1P0CF51 173 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 NTF3P20783 257 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 PET117Q6UWS5 81 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 FAM231DQ6ZW35 169 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 GTSF1Q8WW33 167 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 SMIM7Q9BQ49 75 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 CHCHD7Q9BUK0 85 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 CNFNQ9BYD5 112 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 DPH3P1Q9H4G8 78 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 URGCP-MRPS24S4R325 110 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 DNAH8Q96JB1 4490 aa4.6□□□□□ -1.67
HMGN1-205ENST00000419378 A0A087WX48 190 aa4.59□□□□□ -1.67
HMGN1-205ENST00000419378 LRCOL1A6NCL2 159 aa4.59□□□□□ -1.67
HMGN1-205ENST00000419378 H7C1H1 209 aa4.59□□□□□ -1.67
HMGN1-205ENST00000419378 GATCO43716 136 aaKnown RBP4.59□□□□□ -1.67
HMGN1-205ENST00000419378 TSHBP01222 138 aa4.59□□□□□ -1.67
HMGN1-205ENST00000419378 SRP19P09132 144 aaKnown RBP4.59□□□□□ -1.67
HMGN1-205ENST00000419378 TEX261Q6UWH6 196 aa4.59□□□□□ -1.67
HMGN1-205ENST00000419378 LINC01551Q86U37 167 aa4.59□□□□□ -1.67
HMGN1-205ENST00000419378 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.59□□□□□ -1.67
HMGN1-205ENST00000419378 TRAV8-3A0A0A6YYJ7 113 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 ZNF727A8MUV8 499 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 WFDC2Q14508 124 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 MPV17L2Q567V2 206 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 TMEM97Q5BJF2 176 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 KCNIP4Q6PIL6 250 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 RASL11AQ6T310 242 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 NTM-AS1Q6ZSK4 140 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 MAPKAPK5-AS1Q8N8E1 139 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 DNAJC30Q96LL9 226 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 CHCHD5Q9BSY4 110 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 KLK12Q9UKR0 248 aa4.58□□□□□ -1.68
HMGN1-205ENST00000419378 TRAV26-2A0A0B4J265 109 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 IFITM10A6NMD0 228 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 A8MWL6 223 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 C9JQL5 133 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 TMEM262E9PQX1 116 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 LINC01547P58512 204 aaPredicted RBP4.57□□□□□ -1.68
HMGN1-205ENST00000419378 PKIAP61925 76 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 ELOBQ15370 118 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 STPG4Q8N801 248 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 Q8N814 137 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 C15orf54Q8N8G6 183 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 UBE2WQ96B02 151 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 RMI2Q96E14 147 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 PGLYRP4Q96LB8 373 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 OSTCQ9NRP0 149 aa4.57□□□□□ -1.68
HMGN1-205ENST00000419378 TRBV25-1A0A075B6N4 114 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 IGKV2D-24A0A075B6R9 120 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 IGLV9-49A0A0B4J1Y8 123 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 IGHV1-24A0A0C4DH33 117 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 HIGD1CA8MV81 97 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 KRTAP29-1A8MX34 341 aaPredicted RBP4.56□□□□□ -1.68
HMGN1-205ENST00000419378 LECT2O14960 151 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 CRPP02741 224 aa4.56□□□□□ -1.68
HMGN1-205ENST00000419378 ANGP03950 147 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms