RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 C4orf3Q8WVX3 66 aa10.25□□□□□ -0.77
LINC00940-201ENST00000418006 SETXQ7Z333 2677 aaKnown RBP10.25□□□□□ -0.77
LINC00940-201ENST00000418006 LGALS9O00182 355 aa10.25□□□□□ -0.77
LINC00940-201ENST00000418006 SNCGO76070 127 aa10.25□□□□□ -0.77
LINC00940-201ENST00000418006 M0QXV9 152 aa10.24□□□□□ -0.77
LINC00940-201ENST00000418006 CRLF1O75462 422 aa10.24□□□□□ -0.77
LINC00940-201ENST00000418006 RAX2Q96IS3 184 aa10.24□□□□□ -0.77
LINC00940-201ENST00000418006 CCDC179H3BU77 68 aa10.24□□□□□ -0.77
LINC00940-201ENST00000418006 PAPPA-AS1Q5QFB9 102 aa10.24□□□□□ -0.77
LINC00940-201ENST00000418006 LINC01006Q8NI28 216 aa10.24□□□□□ -0.77
LINC00940-201ENST00000418006 FLNBO75369 2602 aaKnown RBP10.23□□□□□ -0.77
LINC00940-201ENST00000418006 GAGE12JA6NER3 117 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 GAGE7O76087 117 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 GAGE12FP0CL80 117 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 GAGE12GP0CL81 117 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 GAGE12IP0CL82 117 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 SNRPD3P62318 126 aaKnown RBP10.23□□□□□ -0.77
LINC00940-201ENST00000418006 GAGE4Q13068 117 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 ZFAND2AQ8N6M9 145 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
LINC00940-201ENST00000418006 S100A4P26447 101 aaKnown RBP10.23□□□□□ -0.77
LINC00940-201ENST00000418006 PMVKQ15126 192 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 AMELXQ99217 191 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 CITED2Q99967 270 aaPredicted RBP10.23□□□□□ -0.77
LINC00940-201ENST00000418006 TP53TG1Q9Y2A0 90 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 PHLDA3Q9Y5J5 127 aa10.23□□□□□ -0.77
LINC00940-201ENST00000418006 IGIPA6NJ69 53 aa10.22□□□□□ -0.77
LINC00940-201ENST00000418006 RNASE1P07998 156 aaKnown RBP10.22□□□□□ -0.77
LINC00940-201ENST00000418006 DEFB104AQ8WTQ1 72 aa10.22□□□□□ -0.77
LINC00940-201ENST00000418006 HIVEP1P15822 2718 aa10.22□□□□□ -0.77
LINC00940-201ENST00000418006 A4D1N5 150 aa10.22□□□□□ -0.77
LINC00940-201ENST00000418006 IGHV3-33P01772 117 aa10.22□□□□□ -0.77
LINC00940-201ENST00000418006 IFITM1P13164 125 aa10.22□□□□□ -0.77
LINC00940-201ENST00000418006 TTC32Q5I0X7 151 aa10.22□□□□□ -0.77
LINC00940-201ENST00000418006 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
LINC00940-201ENST00000418006 Q8N1Y9 231 aa10.22□□□□□ -0.77
LINC00940-201ENST00000418006 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
LINC00940-201ENST00000418006 H7C2G1 150 aa10.21□□□□□ -0.77
LINC00940-201ENST00000418006 K7EQG2 157 aa10.21□□□□□ -0.77
LINC00940-201ENST00000418006 TRBV7-9A0A0J9YWB2 115 aa10.21□□□□□ -0.78
LINC00940-201ENST00000418006 INAFM1C9JVW0 142 aa10.21□□□□□ -0.78
LINC00940-201ENST00000418006 CFAP161Q6P656 301 aa10.21□□□□□ -0.78
LINC00940-201ENST00000418006 ZNRF2Q8NHG8 242 aa10.21□□□□□ -0.78
LINC00940-201ENST00000418006 TMEM263Q8WUH6 116 aaKnown RBP10.21□□□□□ -0.78
LINC00940-201ENST00000418006 PEMTQ9UBM1 199 aa10.21□□□□□ -0.78
LINC00940-201ENST00000418006 TRAV12-2A0A075B6T6 113 aa10.2□□□□□ -0.78
LINC00940-201ENST00000418006 TRAV21A0A0B4J279 112 aa10.2□□□□□ -0.78
LINC00940-201ENST00000418006 J3QQQ9 107 aa10.2□□□□□ -0.78
LINC00940-201ENST00000418006 PPP1R17O96001 155 aa10.2□□□□□ -0.78
LINC00940-201ENST00000418006 HILS1P60008 231 aa10.2□□□□□ -0.78
LINC00940-201ENST00000418006 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
LINC00940-201ENST00000418006 DYNLRB2Q8TF09 96 aa10.2□□□□□ -0.78
LINC00940-201ENST00000418006 LENEPQ9Y5L5 61 aa10.2□□□□□ -0.78
LINC00940-201ENST00000418006 P0DMU3 169 aa10.19□□□□□ -0.78
LINC00940-201ENST00000418006 FAM231AP0DMU4 169 aa10.19□□□□□ -0.78
LINC00940-201ENST00000418006 FAM231CP0DMU5 169 aa10.19□□□□□ -0.78
LINC00940-201ENST00000418006 LGALS3P17931 250 aaKnown RBP10.19□□□□□ -0.78
LINC00940-201ENST00000418006 TRAV12-3A0A0B4J271 114 aa10.19□□□□□ -0.78
LINC00940-201ENST00000418006 GNRH2O43555 120 aa10.19□□□□□ -0.78
LINC00940-201ENST00000418006 Q6Q795 121 aa10.19□□□□□ -0.78
LINC00940-201ENST00000418006 TMEM61Q8N0U2 210 aa10.19□□□□□ -0.78
LINC00940-201ENST00000418006 CCL24O00175 119 aa10.18□□□□□ -0.78
LINC00940-201ENST00000418006 SHISA2Q6UWI4 295 aa10.18□□□□□ -0.78
LINC00940-201ENST00000418006 TMEM141Q96I45 108 aa10.18□□□□□ -0.78
LINC00940-201ENST00000418006 ODF3Q96PU9 254 aa10.18□□□□□ -0.78
LINC00940-201ENST00000418006 FAM110AQ9BQ89 295 aa10.18□□□□□ -0.78
LINC00940-201ENST00000418006 NSD1Q96L73 2696 aaPredicted RBP10.18□□□□□ -0.78
LINC00940-201ENST00000418006 LINC01620Q4KN68 170 aa10.18□□□□□ -0.78
LINC00940-201ENST00000418006 FAM19A4Q96LR4 140 aa10.18□□□□□ -0.78
LINC00940-201ENST00000418006 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 A0A0B4J2C4 111 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 A0A0J9YX75 114 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 KNCNA6PVL3 124 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 DEFB131AP59861 70 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 HERV-K104P63124 156 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 ATXN8Q156A1 80 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 SPINK13Q1W4C9 94 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 NSUN5P1Q3KNT7 163 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 ZNF876PQ49A33 203 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 POM121L12Q8N7R1 296 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 TRAV2A0A0B4J234 112 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 RPL32P62910 135 aaKnown RBP10.17□□□□□ -0.78
LINC00940-201ENST00000418006 SMIM20Q8N5G0 67 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 C15orf53Q8NAA6 179 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 TIMM17AQ99595 171 aa10.17□□□□□ -0.78
LINC00940-201ENST00000418006 MED14OSP0DP75 135 aa10.16□□□□□ -0.78
LINC00940-201ENST00000418006 RPL13AP40429 203 aaKnown RBP10.16□□□□□ -0.78
LINC00940-201ENST00000418006 FAM159AQ6UWV7 190 aa10.16□□□□□ -0.78
LINC00940-201ENST00000418006 MUSTN1Q8IVN3 82 aa10.16□□□□□ -0.78
LINC00940-201ENST00000418006 MUC4Q99102 2169 aa10.16□□□□□ -0.78
LINC00940-201ENST00000418006 RNASE3P12724 160 aaKnown RBP10.16□□□□□ -0.78
LINC00940-201ENST00000418006 POLR2KP53803 58 aaKnown RBP10.16□□□□□ -0.78
LINC00940-201ENST00000418006 LINC00315P59091 139 aa10.16□□□□□ -0.78
LINC00940-201ENST00000418006 Q1RN00 199 aa10.16□□□□□ -0.78
LINC00940-201ENST00000418006 KIF25-AS1Q9Y6Z4 181 aa10.16□□□□□ -0.78
LINC00940-201ENST00000418006 FN1P02751 2386 aaKnown RBP10.16□□□□□ -0.78
LINC00940-201ENST00000418006 LINC01600Q96MT4 127 aa10.15□□□□□ -0.78
LINC00940-201ENST00000418006 C16orf95Q9H693 158 aa10.15□□□□□ -0.78
LINC00940-201ENST00000418006 APRG1Q8IVJ8 170 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms