RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 TMEM262E9PQX1 116 aa8.39□□□□□ -1.07
SKA1-203ENST00000417656 GAGE6Q13070 117 aa8.39□□□□□ -1.07
SKA1-203ENST00000417656 COTL1Q14019 142 aa8.39□□□□□ -1.07
SKA1-203ENST00000417656 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
SKA1-203ENST00000417656 TMEM243Q9BU79 118 aa8.39□□□□□ -1.07
SKA1-203ENST00000417656 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
SKA1-203ENST00000417656 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
SKA1-203ENST00000417656 CTDSP1Q9GZU7 261 aa8.39□□□□□ -1.07
SKA1-203ENST00000417656 ST20Q9HBF5 79 aa8.39□□□□□ -1.07
SKA1-203ENST00000417656 HECTD4Q9Y4D8 3996 aa8.38□□□□□ -1.07
SKA1-203ENST00000417656 C7orf77A4D0Y5 90 aa8.38□□□□□ -1.07
SKA1-203ENST00000417656 AMTP48728 403 aa8.38□□□□□ -1.07
SKA1-203ENST00000417656 LAGE3Q14657 143 aa8.38□□□□□ -1.07
SKA1-203ENST00000417656 NRACQ8N912 160 aa8.38□□□□□ -1.07
SKA1-203ENST00000417656 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
SKA1-203ENST00000417656 TMEM70Q9BUB7 260 aa8.38□□□□□ -1.07
SKA1-203ENST00000417656 KLK12Q9UKR0 248 aa8.38□□□□□ -1.07
SKA1-203ENST00000417656 D6R8Y8 96 aa8.37□□□□□ -1.07
SKA1-203ENST00000417656 PKIAP61925 76 aa8.37□□□□□ -1.07
SKA1-203ENST00000417656 RHEBQ15382 184 aa8.37□□□□□ -1.07
SKA1-203ENST00000417656 ATRAIDQ6UW56 229 aa8.37□□□□□ -1.07
SKA1-203ENST00000417656 Q8N976 141 aa8.37□□□□□ -1.07
SKA1-203ENST00000417656 BTF3L4Q96K17 158 aa8.37□□□□□ -1.07
SKA1-203ENST00000417656 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
SKA1-203ENST00000417656 TMEM242Q9NWH2 141 aa8.37□□□□□ -1.07
SKA1-203ENST00000417656 I3L3M4 83 aa8.36□□□□□ -1.07
SKA1-203ENST00000417656 TSHBP01222 138 aa8.36□□□□□ -1.07
SKA1-203ENST00000417656 APOC3P02656 99 aa8.36□□□□□ -1.07
SKA1-203ENST00000417656 APCSP02743 223 aa8.36□□□□□ -1.07
SKA1-203ENST00000417656 PMCHP20382 165 aa8.36□□□□□ -1.07
SKA1-203ENST00000417656 CKS2P33552 79 aa8.36□□□□□ -1.07
SKA1-203ENST00000417656 RBX1P62877 108 aa8.36□□□□□ -1.07
SKA1-203ENST00000417656 UBE2WQ96B02 151 aa8.36□□□□□ -1.07
SKA1-203ENST00000417656 RPS10P5Q9NQ39 176 aa8.36□□□□□ -1.07
SKA1-203ENST00000417656 UBE2L6O14933 153 aa8.35□□□□□ -1.07
SKA1-203ENST00000417656 PPP1R17O96001 155 aa8.35□□□□□ -1.07
SKA1-203ENST00000417656 NPYP01303 97 aa8.35□□□□□ -1.07
SKA1-203ENST00000417656 ANGP03950 147 aaKnown RBP8.35□□□□□ -1.07
SKA1-203ENST00000417656 POLR2KP53803 58 aaKnown RBP8.35□□□□□ -1.07
SKA1-203ENST00000417656 SUMO2P61956 95 aaKnown RBP8.35□□□□□ -1.07
SKA1-203ENST00000417656 ELOBQ15370 118 aa8.35□□□□□ -1.07
SKA1-203ENST00000417656 NDUFA5Q16718 116 aa8.35□□□□□ -1.07
SKA1-203ENST00000417656 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
SKA1-203ENST00000417656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.34□□□□□ -1.07
SKA1-203ENST00000417656 TRAV8-3A0A0A6YYJ7 113 aa8.34□□□□□ -1.07
SKA1-203ENST00000417656 TRBV27A0A0K0K1C4 114 aa8.34□□□□□ -1.07
SKA1-203ENST00000417656 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
SKA1-203ENST00000417656 IGKV2-29A2NJV5 120 aaPredicted RBP8.34□□□□□ -1.07
SKA1-203ENST00000417656 PSCAO43653 123 aa8.34□□□□□ -1.07
SKA1-203ENST00000417656 TNFRSF6BO95407 300 aa8.34□□□□□ -1.07
SKA1-203ENST00000417656 CRPP02741 224 aa8.34□□□□□ -1.07
SKA1-203ENST00000417656 S100PP25815 95 aa8.34□□□□□ -1.07
SKA1-203ENST00000417656 CLPSL2Q6UWE3 100 aa8.34□□□□□ -1.07
SKA1-203ENST00000417656 PKD1P98161 4303 aa8.34□□□□□ -1.07
SKA1-203ENST00000417656 TRAV9-1A0A075B6T8 112 aa8.33□□□□□ -1.08
SKA1-203ENST00000417656 ORMDL3Q8N138 153 aa8.33□□□□□ -1.08
SKA1-203ENST00000417656 SVBPQ8N300 66 aa8.33□□□□□ -1.08
SKA1-203ENST00000417656 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
SKA1-203ENST00000417656 IGLV4-60A0A075B6I1 120 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 TRBV24-1A0A075B6N3 115 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 IGKV2D-24A0A075B6R9 120 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 A0A087WTM6 91 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 SNAPINO95295 136 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 PPBPP02775 128 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 ENHOQ6UWT2 76 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 TMEM136Q6ZRR5 245 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 SLC7A5P1Q8MH63 180 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 C20orf203Q8NBC4 194 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 PRELID3AQ96N28 172 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 C20orf78Q9BR46 151 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
SKA1-203ENST00000417656 VCYO14598 125 aa8.31□□□□□ -1.08
SKA1-203ENST00000417656 PHOX2AO14813 284 aa8.31□□□□□ -1.08
SKA1-203ENST00000417656 ESDP10768 282 aa8.31□□□□□ -1.08
SKA1-203ENST00000417656 FCER1GP30273 86 aa8.31□□□□□ -1.08
SKA1-203ENST00000417656 LINC00269Q8N2A0 174 aa8.31□□□□□ -1.08
SKA1-203ENST00000417656 RMI2Q96E14 147 aa8.31□□□□□ -1.08
SKA1-203ENST00000417656 TM2D2Q9BX73 214 aa8.31□□□□□ -1.08
SKA1-203ENST00000417656 PKHD1P08F94 4074 aa8.3□□□□□ -1.08
SKA1-203ENST00000417656 A0A1B0GUV1 79 aa8.3□□□□□ -1.08
SKA1-203ENST00000417656 FGF6P10767 208 aa8.3□□□□□ -1.08
SKA1-203ENST00000417656 KRTAP10-2P60368 255 aa8.3□□□□□ -1.08
SKA1-203ENST00000417656 RPL32P62910 135 aaKnown RBP8.3□□□□□ -1.08
SKA1-203ENST00000417656 Q0VG73 95 aa8.3□□□□□ -1.08
SKA1-203ENST00000417656 AMMECR1LQ6DCA0 310 aa8.3□□□□□ -1.08
SKA1-203ENST00000417656 RNASEKQ6P5S7 137 aaKnown RBP8.3□□□□□ -1.08
SKA1-203ENST00000417656 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
SKA1-203ENST00000417656 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
SKA1-203ENST00000417656 PRR34Q9NV39 138 aa8.3□□□□□ -1.08
SKA1-203ENST00000417656 LRCOL1A6NCL2 159 aa8.29□□□□□ -1.08
SKA1-203ENST00000417656 H7C423 109 aa8.29□□□□□ -1.08
SKA1-203ENST00000417656 HLA-DQA1P01909 254 aa8.29□□□□□ -1.08
SKA1-203ENST00000417656 REG3AQ06141 175 aa8.29□□□□□ -1.08
SKA1-203ENST00000417656 WFDC2Q14508 124 aa8.29□□□□□ -1.08
SKA1-203ENST00000417656 C1orf43Q9BWL3 253 aa8.29□□□□□ -1.08
SKA1-203ENST00000417656 TGIF2-C20orf24A0A0A6YYL0 155 aa8.28□□□□□ -1.08
SKA1-203ENST00000417656 EREGO14944 169 aa8.28□□□□□ -1.08
SKA1-203ENST00000417656 LECT2O14960 151 aa8.28□□□□□ -1.08
SKA1-203ENST00000417656 FUSP35637 526 aaKnown RBP eCLIP8.28□□□□□ -1.08
SKA1-203ENST00000417656 MIAQ16674 131 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms