RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 LELP1Q5T871 98 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 NRACQ8N912 160 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 PRSS3P2Q8NHM4 247 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 DEFB104AQ8WTQ1 72 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 TMEM70Q9BUB7 260 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 SMIM2Q9BVW6 85 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
TRIM48-201ENST00000417545 MRPS16Q9Y3D3 137 aaKnown RBP5.86□□□□□ -1.47
TRIM48-201ENST00000417545 COLCA2A8K830 154 aa5.85□□□□□ -1.47
TRIM48-201ENST00000417545 TMEM262E9PQX1 116 aa5.85□□□□□ -1.47
TRIM48-201ENST00000417545 TIRAPP58753 221 aa5.85□□□□□ -1.47
TRIM48-201ENST00000417545 SMAGPQ0VAQ4 97 aa5.85□□□□□ -1.47
TRIM48-201ENST00000417545 LGALS9CQ6DKI2 356 aa5.85□□□□□ -1.47
TRIM48-201ENST00000417545 FA2HQ7L5A8 372 aa5.85□□□□□ -1.47
TRIM48-201ENST00000417545 TMEM18Q96B42 140 aa5.85□□□□□ -1.47
TRIM48-201ENST00000417545 TMEM243Q9BU79 118 aa5.85□□□□□ -1.47
TRIM48-201ENST00000417545 NXT2Q9NPJ8 142 aaKnown RBP5.85□□□□□ -1.47
TRIM48-201ENST00000417545 LINC00588Q9Y4M8 146 aa5.85□□□□□ -1.47
TRIM48-201ENST00000417545 A0A087WX48 190 aa5.84□□□□□ -1.47
TRIM48-201ENST00000417545 TRBV6-8A0A0A6YYG3 113 aa5.84□□□□□ -1.47
TRIM48-201ENST00000417545 SIVA1O15304 175 aa5.84□□□□□ -1.47
TRIM48-201ENST00000417545 TRGC2P03986 189 aa5.84□□□□□ -1.47
TRIM48-201ENST00000417545 AMMECR1LQ6DCA0 310 aa5.84□□□□□ -1.47
TRIM48-201ENST00000417545 LINC00476Q8WZB0 136 aa5.84□□□□□ -1.47
TRIM48-201ENST00000417545 ALKBH7Q9BT30 221 aaPredicted RBP5.84□□□□□ -1.47
TRIM48-201ENST00000417545 TRAV9-2A0A087WT02 112 aa5.83□□□□□ -1.48
TRIM48-201ENST00000417545 TRBV27A0A0K0K1C4 114 aa5.83□□□□□ -1.48
TRIM48-201ENST00000417545 POLR2KP53803 58 aaKnown RBP5.83□□□□□ -1.48
TRIM48-201ENST00000417545 RAB5BP61020 215 aa5.83□□□□□ -1.48
TRIM48-201ENST00000417545 RPL32P62910 135 aaKnown RBP5.83□□□□□ -1.48
TRIM48-201ENST00000417545 GAGE6Q13070 117 aa5.83□□□□□ -1.48
TRIM48-201ENST00000417545 RNASEKQ6P5S7 137 aaKnown RBP5.83□□□□□ -1.48
TRIM48-201ENST00000417545 Q8N8P6 123 aa5.83□□□□□ -1.48
TRIM48-201ENST00000417545 C1orf196B1AJZ1 125 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 TSHBP01222 138 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 IGHV3-30P01768 117 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 IGHV3-33P01772 117 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 IGHV3-30-3P0DP02 117 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 IGHV3-30-5P0DP03 117 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 G0S2P27469 103 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 IQCJQ1A5X6 159 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 ORMDL2Q53FV1 153 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 TTC32Q5I0X7 151 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 DGAT2L7PQ6IED9 249 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 BAGE3Q86Y29 109 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 WFDC10BQ8IUB3 73 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 TMEM101Q96IK0 257 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 IGLV2-18A0A075B6J9 118 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.82□□□□□ -1.48
TRIM48-201ENST00000417545 IGKV2-29A2NJV5 120 aaPredicted RBP5.82□□□□□ -1.48
TRIM48-201ENST00000417545 IFI27P40305 119 aaPredicted RBP5.82□□□□□ -1.48
TRIM48-201ENST00000417545 LAGE3Q14657 143 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 UPK3BQ9BT76 320 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 Q9H8V8 135 aa5.82□□□□□ -1.48
TRIM48-201ENST00000417545 STARD9Q9P2P6 4700 aa5.81□□□□□ -1.48
TRIM48-201ENST00000417545 K7EMI3 77 aa5.81□□□□□ -1.48
TRIM48-201ENST00000417545 CRPP02741 224 aa5.81□□□□□ -1.48
TRIM48-201ENST00000417545 BTF3P20290 206 aaKnown RBP5.81□□□□□ -1.48
TRIM48-201ENST00000417545 NTM-AS1Q6ZSK4 140 aa5.81□□□□□ -1.48
TRIM48-201ENST00000417545 C10orf126Q8N4M7 172 aa5.81□□□□□ -1.48
TRIM48-201ENST00000417545 C18orf32Q8TCD1 76 aa5.81□□□□□ -1.48
TRIM48-201ENST00000417545 AP5S1Q9NUS5 200 aa5.81□□□□□ -1.48
TRIM48-201ENST00000417545 LCE6AA0A183 80 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 TMEM238LA0A1B0GVL6 79 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 PRSS47A8MTI9 375 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 H7C423 109 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 M0R2N4 97 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 HSBP1O75506 76 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 ANGP03950 147 aaKnown RBP5.8□□□□□ -1.48
TRIM48-201ENST00000417545 NIT1Q86X76 327 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 OR5A1Q8NGJ0 315 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 CHCHD7Q9BUK0 85 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 CYSLTR1Q9Y271 337 aa5.8□□□□□ -1.48
TRIM48-201ENST00000417545 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
TRIM48-201ENST00000417545 LINC00614P0C842 121 aa5.79□□□□□ -1.48
TRIM48-201ENST00000417545 FGF6P10767 208 aa5.79□□□□□ -1.48
TRIM48-201ENST00000417545 ZNF25P17030 456 aaPredicted RBP5.79□□□□□ -1.48
TRIM48-201ENST00000417545 MPV17L2Q567V2 206 aa5.79□□□□□ -1.48
TRIM48-201ENST00000417545 LINC01556Q5JQF7 62 aa5.79□□□□□ -1.48
TRIM48-201ENST00000417545 IGKV3OR2-268A0A0C4DH90 116 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 NBDYA0A0U1RRE5 68 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 LINC01549A6NIU2 74 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 K7EP13 123 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 DNAH10OSP0CZ25 163 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 RBX1P62877 108 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 C2orf66Q6UXQ4 117 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 Q6ZN92 141 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 C20orf203Q8NBC4 194 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 CHCHD1Q96BP2 118 aaKnown RBP5.78□□□□□ -1.48
TRIM48-201ENST00000417545 KLK12Q9UKR0 248 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
TRIM48-201ENST00000417545 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.49
TRIM48-201ENST00000417545 ESDP10768 282 aa5.77□□□□□ -1.49
TRIM48-201ENST00000417545 RPL39P62891 51 aaKnown RBP5.77□□□□□ -1.49
TRIM48-201ENST00000417545 Q0VG73 95 aa5.77□□□□□ -1.49
TRIM48-201ENST00000417545 CLPSL2Q6UWE3 100 aa5.77□□□□□ -1.49
TRIM48-201ENST00000417545 Q8N976 141 aa5.77□□□□□ -1.49
TRIM48-201ENST00000417545 UBE2WQ96B02 151 aa5.77□□□□□ -1.49
TRIM48-201ENST00000417545 RMI2Q96E14 147 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms