RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 NACAE9PAV3 2078 aa10.59□□□□□ -0.71
HDAC9-208ENST00000417496 A8MZ25 164 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 SCGB1C2P0DMR2 95 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 KRTAP10-9P60411 292 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 KHDC1LQ5JSQ8 128 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 TMEM61Q8N0U2 210 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 PRRC2AP48634 2157 aaKnown RBP10.58□□□□□ -0.72
HDAC9-208ENST00000417496 H3BMM0 161 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 LEPROTO15243 131 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 CD28P10747 220 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 FOXI1Q12951 378 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 MUSTN1Q8IVN3 82 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 CCDC168Q8NDH2 2452 aa10.58□□□□□ -0.72
HDAC9-208ENST00000417496 IGHV3-38A0A0C4DH36 116 aa10.57□□□□□ -0.72
HDAC9-208ENST00000417496 USP24Q9UPU5 2620 aa10.57□□□□□ -0.72
HDAC9-208ENST00000417496 C1QTNF4Q9BXJ3 329 aa10.57□□□□□ -0.72
HDAC9-208ENST00000417496 SPATA25Q9BR10 227 aa10.56□□□□□ -0.72
HDAC9-208ENST00000417496 TNFRSF18Q9Y5U5 241 aa10.56□□□□□ -0.72
HDAC9-208ENST00000417496 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
HDAC9-208ENST00000417496 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
HDAC9-208ENST00000417496 IGHV3-30-3P0DP02 117 aa10.56□□□□□ -0.72
HDAC9-208ENST00000417496 IGHV4-31P0DP07 118 aa10.55□□□□□ -0.72
HDAC9-208ENST00000417496 FHL3Q13643 280 aa10.55□□□□□ -0.72
HDAC9-208ENST00000417496 J3QLI3 93 aa10.55□□□□□ -0.72
HDAC9-208ENST00000417496 JMJD1CQ15652 2540 aa10.55□□□□□ -0.72
HDAC9-208ENST00000417496 NBPF19A0A087WUL8 3843 aa10.55□□□□□ -0.72
HDAC9-208ENST00000417496 CARD19Q96LW7 228 aa10.54□□□□□ -0.72
HDAC9-208ENST00000417496 A0A0J9YXY3 114 aa10.54□□□□□ -0.72
HDAC9-208ENST00000417496 PRSS2P07478 247 aa10.54□□□□□ -0.72
HDAC9-208ENST00000417496 NPC2P61916 151 aa10.53□□□□□ -0.72
HDAC9-208ENST00000417496 C11orf44Q8N8P7 122 aa10.53□□□□□ -0.72
HDAC9-208ENST00000417496 LINC01587Q99440 93 aa10.53□□□□□ -0.72
HDAC9-208ENST00000417496 M0R2P5 195 aa10.53□□□□□ -0.72
HDAC9-208ENST00000417496 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
HDAC9-208ENST00000417496 RNF152Q8N8N0 203 aa10.53□□□□□ -0.72
HDAC9-208ENST00000417496 TMEM263Q8WUH6 116 aaKnown RBP10.53□□□□□ -0.72
HDAC9-208ENST00000417496 TIMM21Q9BVV7 248 aa10.53□□□□□ -0.72
HDAC9-208ENST00000417496 FSHBP01225 129 aa10.52□□□□□ -0.72
HDAC9-208ENST00000417496 ADAMTSL4-AS1Q5T5F5 129 aa10.52□□□□□ -0.72
HDAC9-208ENST00000417496 CHCHD7Q9BUK0 85 aa10.52□□□□□ -0.73
HDAC9-208ENST00000417496 APCP25054 2843 aa10.52□□□□□ -0.73
HDAC9-208ENST00000417496 IGHV3OR16-12A0A075B7B8 117 aa10.51□□□□□ -0.73
HDAC9-208ENST00000417496 SPINK8P0C7L1 97 aa10.51□□□□□ -0.73
HDAC9-208ENST00000417496 MRPS36P82909 103 aaKnown RBP10.51□□□□□ -0.73
HDAC9-208ENST00000417496 LINC00467Q9BRT7 94 aa10.51□□□□□ -0.73
HDAC9-208ENST00000417496 CDIP1Q9H305 208 aa10.51□□□□□ -0.73
HDAC9-208ENST00000417496 MAP6D1Q9H9H5 199 aa10.51□□□□□ -0.73
HDAC9-208ENST00000417496 UBR5O95071 2799 aaPredicted RBP10.51□□□□□ -0.73
HDAC9-208ENST00000417496 Q6ZSV7 163 aa10.51□□□□□ -0.73
HDAC9-208ENST00000417496 XCL2Q9UBD3 114 aa10.51□□□□□ -0.73
HDAC9-208ENST00000417496 ERG28Q9UKR5 140 aa10.51□□□□□ -0.73
HDAC9-208ENST00000417496 PYGO1Q9Y3Y4 419 aa10.51□□□□□ -0.73
HDAC9-208ENST00000417496 TRBV20-1A0A075B6N2 111 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 A8MWV9 139 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 Q1RN00 199 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 LYRM7Q5U5X0 104 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 Q6ZUT4 128 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 LITAFQ99732 161 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 UBE2D4Q9Y2X8 147 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 TEN1Q86WV5 123 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 ANKRD29Q8N6D5 301 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 C11orf72Q8NBR9 251 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 DYNLRB2Q8TF09 96 aa10.5□□□□□ -0.73
HDAC9-208ENST00000417496 C9JAW5 83 aa10.49□□□□□ -0.73
HDAC9-208ENST00000417496 Q5PR19 223 aa10.49□□□□□ -0.73
HDAC9-208ENST00000417496 BBC3Q96PG8 261 aaPredicted RBP10.49□□□□□ -0.73
HDAC9-208ENST00000417496 CR1P17927 2039 aa10.49□□□□□ -0.73
HDAC9-208ENST00000417496 ZNF415Q09FC8 603 aa10.49□□□□□ -0.73
HDAC9-208ENST00000417496 ITPR3Q14573 2671 aa10.49□□□□□ -0.73
HDAC9-208ENST00000417496 DAND5Q8N907 189 aa10.48□□□□□ -0.73
HDAC9-208ENST00000417496 ATP6V0E2Q8NHE4 81 aa10.48□□□□□ -0.73
HDAC9-208ENST00000417496 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
HDAC9-208ENST00000417496 IGHV1-58A0A0C4DH39 117 aa10.48□□□□□ -0.73
HDAC9-208ENST00000417496 A0A1W2PRX2 142 aa10.48□□□□□ -0.73
HDAC9-208ENST00000417496 DEFB114Q30KQ6 69 aa10.48□□□□□ -0.73
HDAC9-208ENST00000417496 MT-ATP8P03928 68 aa10.47□□□□□ -0.73
HDAC9-208ENST00000417496 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.47□□□□□ -0.73
HDAC9-208ENST00000417496 PPDPFLQ8WWR9 84 aa10.47□□□□□ -0.73
HDAC9-208ENST00000417496 PEMTQ9UBM1 199 aa10.47□□□□□ -0.73
HDAC9-208ENST00000417496 A0A0B4J2C4 111 aa10.47□□□□□ -0.73
HDAC9-208ENST00000417496 A8MTW9 85 aa10.47□□□□□ -0.73
HDAC9-208ENST00000417496 SLC25A20O43772 301 aa10.47□□□□□ -0.73
HDAC9-208ENST00000417496 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
HDAC9-208ENST00000417496 EDA2RQ9HAV5 297 aa10.47□□□□□ -0.73
HDAC9-208ENST00000417496 XGP55808 180 aa10.46□□□□□ -0.73
HDAC9-208ENST00000417496 SBSPONQ8IVN8 264 aa10.46□□□□□ -0.73
HDAC9-208ENST00000417496 Q96MF0 132 aa10.46□□□□□ -0.73
HDAC9-208ENST00000417496 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.73
HDAC9-208ENST00000417496 SETXQ7Z333 2677 aaKnown RBP10.46□□□□□ -0.73
HDAC9-208ENST00000417496 NDUFA7O95182 113 aa10.46□□□□□ -0.74
HDAC9-208ENST00000417496 C4orf3Q8WVX3 66 aa10.46□□□□□ -0.74
HDAC9-208ENST00000417496 ACANP16112 2415 aa10.46□□□□□ -0.74
HDAC9-208ENST00000417496 MTORP42345 2549 aa10.45□□□□□ -0.74
HDAC9-208ENST00000417496 IGHV3-53P01767 116 aa10.45□□□□□ -0.74
HDAC9-208ENST00000417496 FLNAP21333 2647 aaKnown RBP10.45□□□□□ -0.74
HDAC9-208ENST00000417496 TINCRA0A1B0GVN0 87 aa10.45□□□□□ -0.74
HDAC9-208ENST00000417496 TRIAP1O43715 76 aa10.45□□□□□ -0.74
HDAC9-208ENST00000417496 GEMIN7Q9H840 131 aaKnown RBP10.45□□□□□ -0.74
HDAC9-208ENST00000417496 SCGB1A1P11684 91 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms