RNA–Protein interactions for RNA: ENST00000416995.1

LINC02558-201, Transcript of long intergenic non-protein coding RNA 2558, humanhuman

TSL 5

Gene LINC02558, Length 178 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02558-201ENST00000416995 TPPP3Q9BW30 176 aa9.72□□□□□ -0.85
LINC02558-201ENST00000416995 GFRA4Q9GZZ7 299 aa9.72□□□□□ -0.85
LINC02558-201ENST00000416995 SMDT1Q9H4I9 107 aa9.72□□□□□ -0.85
LINC02558-201ENST00000416995 IGLV4-60A0A075B6I1 120 aa9.71□□□□□ -0.86
LINC02558-201ENST00000416995 SRP19P09132 144 aaKnown RBP9.71□□□□□ -0.86
LINC02558-201ENST00000416995 MT1HL1P0DM35 61 aa9.71□□□□□ -0.86
LINC02558-201ENST00000416995 CIRBPQ14011 172 aaKnown RBP9.71□□□□□ -0.86
LINC02558-201ENST00000416995 FER1L6-AS1Q8NA97 138 aa9.71□□□□□ -0.86
LINC02558-201ENST00000416995 hDV102S1A0JD36 115 aa9.7□□□□□ -0.86
LINC02558-201ENST00000416995 SLPIP03973 132 aa9.7□□□□□ -0.86
LINC02558-201ENST00000416995 RPS20P60866 119 aaKnown RBP9.7□□□□□ -0.86
LINC02558-201ENST00000416995 OR2D3Q8NGH3 330 aa9.7□□□□□ -0.86
LINC02558-201ENST00000416995 OCC1Q8TAD7 63 aa9.7□□□□□ -0.86
LINC02558-201ENST00000416995 TNXBP22105 4242 aa9.7□□□□□ -0.86
LINC02558-201ENST00000416995 TRAV8-4A0A0B4J246 113 aa9.69□□□□□ -0.86
LINC02558-201ENST00000416995 A0A1B0GUV1 79 aa9.69□□□□□ -0.86
LINC02558-201ENST00000416995 H7C1H1 209 aa9.69□□□□□ -0.86
LINC02558-201ENST00000416995 P01737 135 aa9.69□□□□□ -0.86
LINC02558-201ENST00000416995 TMEM243Q9BU79 118 aa9.69□□□□□ -0.86
LINC02558-201ENST00000416995 K7EN84 100 aa9.68□□□□□ -0.86
LINC02558-201ENST00000416995 RAB14P61106 215 aa9.68□□□□□ -0.86
LINC02558-201ENST00000416995 CACNG7P62955 275 aa9.68□□□□□ -0.86
LINC02558-201ENST00000416995 PEA15Q15121 130 aa9.68□□□□□ -0.86
LINC02558-201ENST00000416995 RASL11AQ6T310 242 aa9.68□□□□□ -0.86
LINC02558-201ENST00000416995 SMIM7Q9BQ49 75 aa9.68□□□□□ -0.86
LINC02558-201ENST00000416995 IGHV3-64A0A075B6Q5 118 aa9.67□□□□□ -0.86
LINC02558-201ENST00000416995 XKRY2A2RUG3 117 aa9.67□□□□□ -0.86
LINC02558-201ENST00000416995 ZNF727A8MUV8 499 aa9.67□□□□□ -0.86
LINC02558-201ENST00000416995 CHTF8P0CG12 524 aa9.67□□□□□ -0.86
LINC02558-201ENST00000416995 FAM74A3Q4VXF1 159 aa9.67□□□□□ -0.86
LINC02558-201ENST00000416995 CLLU1Q5K131 121 aa9.67□□□□□ -0.86
LINC02558-201ENST00000416995 Q6ZRU5 148 aa9.67□□□□□ -0.86
LINC02558-201ENST00000416995 FAM231DQ6ZW35 169 aa9.67□□□□□ -0.86
LINC02558-201ENST00000416995 A0A087WYN8 130 aa9.66□□□□□ -0.86
LINC02558-201ENST00000416995 CEBPGP53567 150 aa9.66□□□□□ -0.86
LINC02558-201ENST00000416995 IFITM2Q01629 132 aa9.66□□□□□ -0.86
LINC02558-201ENST00000416995 NUDT10Q8NFP7 164 aa9.66□□□□□ -0.86
LINC02558-201ENST00000416995 SPACA4Q8TDM5 124 aa9.66□□□□□ -0.86
LINC02558-201ENST00000416995 NUDT11Q96G61 164 aa9.66□□□□□ -0.86
LINC02558-201ENST00000416995 PGLYRP4Q96LB8 373 aa9.66□□□□□ -0.86
LINC02558-201ENST00000416995 AP5S1Q9NUS5 200 aa9.66□□□□□ -0.86
LINC02558-201ENST00000416995 C9JQL5 133 aa9.65□□□□□ -0.86
LINC02558-201ENST00000416995 F2Z2F3 143 aa9.65□□□□□ -0.86
LINC02558-201ENST00000416995 SRSF3P84103 164 aaKnown RBP9.65□□□□□ -0.86
LINC02558-201ENST00000416995 LYZL1Q6UWQ5 148 aa9.65□□□□□ -0.86
LINC02558-201ENST00000416995 LINC01551Q86U37 167 aa9.65□□□□□ -0.86
LINC02558-201ENST00000416995 DPH3Q96FX2 82 aa9.65□□□□□ -0.86
LINC02558-201ENST00000416995 RNF185Q96GF1 192 aa9.65□□□□□ -0.86
LINC02558-201ENST00000416995 RPP21Q9H633 154 aaKnown RBP9.65□□□□□ -0.86
LINC02558-201ENST00000416995 NIT2Q9NQR4 276 aa9.65□□□□□ -0.86
LINC02558-201ENST00000416995 LRP2P98164 4655 aa9.64□□□□□ -0.87
LINC02558-201ENST00000416995 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.64□□□□□ -0.87
LINC02558-201ENST00000416995 TRGC1P0CF51 173 aa9.64□□□□□ -0.87
LINC02558-201ENST00000416995 NTF3P20783 257 aa9.64□□□□□ -0.87
LINC02558-201ENST00000416995 C15orf56Q8N910 161 aa9.64□□□□□ -0.87
LINC02558-201ENST00000416995 DPH3P1Q9H4G8 78 aa9.64□□□□□ -0.87
LINC02558-201ENST00000416995 UBE2L6O14933 153 aa9.63□□□□□ -0.87
LINC02558-201ENST00000416995 AMTP48728 403 aa9.63□□□□□ -0.87
LINC02558-201ENST00000416995 COTL1Q14019 142 aa9.63□□□□□ -0.87
LINC02558-201ENST00000416995 CT83Q5H943 113 aa9.63□□□□□ -0.87
LINC02558-201ENST00000416995 RNASE7Q9H1E1 156 aaKnown RBP9.63□□□□□ -0.87
LINC02558-201ENST00000416995 PLAC8Q9NZF1 115 aa9.63□□□□□ -0.87
LINC02558-201ENST00000416995 GAGE12HA6NDE8 117 aa9.62□□□□□ -0.87
LINC02558-201ENST00000416995 CTRLP40313 264 aa9.62□□□□□ -0.87
LINC02558-201ENST00000416995 TMEM241Q24JQ0 296 aa9.62□□□□□ -0.87
LINC02558-201ENST00000416995 WDR73Q6P4I2 378 aa9.62□□□□□ -0.87
LINC02558-201ENST00000416995 CNFNQ9BYD5 112 aa9.62□□□□□ -0.87
LINC02558-201ENST00000416995 OSTCQ9NRP0 149 aa9.62□□□□□ -0.87
LINC02558-201ENST00000416995 NAT8Q9UHE5 227 aa9.62□□□□□ -0.87
LINC02558-201ENST00000416995 GATCO43716 136 aaKnown RBP9.61□□□□□ -0.87
LINC02558-201ENST00000416995 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
LINC02558-201ENST00000416995 A8MWL6 223 aa9.6□□□□□ -0.87
LINC02558-201ENST00000416995 PHOX2AO14813 284 aa9.6□□□□□ -0.87
LINC02558-201ENST00000416995 RPL23P62829 140 aaKnown RBP9.6□□□□□ -0.87
LINC02558-201ENST00000416995 COX6A2Q02221 97 aa9.6□□□□□ -0.87
LINC02558-201ENST00000416995 ISOC2Q96AB3 205 aa9.6□□□□□ -0.87
LINC02558-201ENST00000416995 TRAV26-2A0A0B4J265 109 aa9.59□□□□□ -0.87
LINC02558-201ENST00000416995 IGKV3OR2-268A0A0C4DH90 116 aa9.59□□□□□ -0.87
LINC02558-201ENST00000416995 FOXA3P55318 350 aaPredicted RBP9.59□□□□□ -0.87
LINC02558-201ENST00000416995 TWIST1Q15672 202 aa9.59□□□□□ -0.87
LINC02558-201ENST00000416995 HIGD2BQ4VC39 106 aa9.59□□□□□ -0.87
LINC02558-201ENST00000416995 CFAP161Q6P656 301 aa9.59□□□□□ -0.87
LINC02558-201ENST00000416995 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
LINC02558-201ENST00000416995 RPS10P46783 165 aaKnown RBP9.58□□□□□ -0.88
LINC02558-201ENST00000416995 PRSS3P2Q8NHM4 247 aa9.58□□□□□ -0.88
LINC02558-201ENST00000416995 GTSF1Q8WW33 167 aa9.58□□□□□ -0.88
LINC02558-201ENST00000416995 NDUFA5Q16718 116 aa9.57□□□□□ -0.88
LINC02558-201ENST00000416995 UQCC3Q6UW78 93 aa9.57□□□□□ -0.88
LINC02558-201ENST00000416995 C7orf33Q8WU49 177 aa9.57□□□□□ -0.88
LINC02558-201ENST00000416995 TSKUQ8WUA8 353 aa9.57□□□□□ -0.88
LINC02558-201ENST00000416995 CHCHD10Q8WYQ3 142 aaPredicted RBP9.57□□□□□ -0.88
LINC02558-201ENST00000416995 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
LINC02558-201ENST00000416995 V9GYV3 84 aa9.57□□□□□ -0.88
LINC02558-201ENST00000416995 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
LINC02558-201ENST00000416995 IGKV2-24A0A0C4DH68 120 aa9.56□□□□□ -0.88
LINC02558-201ENST00000416995 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
LINC02558-201ENST00000416995 ADIRFQ15847 76 aa9.56□□□□□ -0.88
LINC02558-201ENST00000416995 MAJINQ3KP22 176 aa9.56□□□□□ -0.88
LINC02558-201ENST00000416995 GVQW2A0A096LPI5 108 aaPredicted RBP9.55□□□□□ -0.88
LINC02558-201ENST00000416995 AMMECR1LQ6DCA0 310 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms