RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 NIT2Q9NQR4 276 aa11.23□□□□□ -0.61
SF1-207ENST00000413951 IGLV5-52A0A0A0MRZ9 124 aa11.22□□□□□ -0.61
SF1-207ENST00000413951 IBA57-AS1B1ANH7 110 aa11.22□□□□□ -0.61
SF1-207ENST00000413951 KRTAP10-1P60331 282 aa11.22□□□□□ -0.61
SF1-207ENST00000413951 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.61
SF1-207ENST00000413951 FUSP35637 526 aaKnown RBP eCLIP11.21□□□□□ -0.615e-13■□□□□ 10.2
SF1-207ENST00000413951 LELP1Q5T871 98 aa11.21□□□□□ -0.61
SF1-207ENST00000413951 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.61
SF1-207ENST00000413951 TMEM70Q9BUB7 260 aa11.21□□□□□ -0.61
SF1-207ENST00000413951 TM2D2Q9BX73 214 aa11.21□□□□□ -0.61
SF1-207ENST00000413951 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.61
SF1-207ENST00000413951 GAS8-AS1O95177 125 aa11.2□□□□□ -0.62
SF1-207ENST00000413951 S100PP25815 95 aa11.2□□□□□ -0.62
SF1-207ENST00000413951 LAGE3Q14657 143 aa11.2□□□□□ -0.62
SF1-207ENST00000413951 MRPL51Q4U2R6 128 aaKnown RBP11.2□□□□□ -0.62
SF1-207ENST00000413951 RPL39LQ96EH5 51 aaKnown RBP11.2□□□□□ -0.62
SF1-207ENST00000413951 RPS10P46783 165 aaKnown RBP11.19□□□□□ -0.62
SF1-207ENST00000413951 ATRAIDQ6UW56 229 aa11.19□□□□□ -0.62
SF1-207ENST00000413951 LRCOL1A6NCL2 159 aa11.18□□□□□ -0.62
SF1-207ENST00000413951 Q8N814 137 aa11.18□□□□□ -0.62
SF1-207ENST00000413951 NRACQ8N912 160 aa11.18□□□□□ -0.62
SF1-207ENST00000413951 URGCP-MRPS24S4R325 110 aa11.18□□□□□ -0.62
SF1-207ENST00000413951 TMEM136Q6ZRR5 245 aa11.17□□□□□ -0.62
SF1-207ENST00000413951 TRBV24-1A0A075B6N3 115 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 TRBV6-8A0A0A6YYG3 113 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 SMKR1H3BMG3 65 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 NCR2O95944 276 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 PPP1R17O96001 155 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 PPBPP02775 128 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 TMEM97Q5BJF2 176 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 NTM-AS1Q6ZSK4 140 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.16□□□□□ -0.62
SF1-207ENST00000413951 YPEL4Q96NS1 127 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 Q9HAA7 133 aa11.16□□□□□ -0.62
SF1-207ENST00000413951 TRAV8-3A0A0A6YYJ7 113 aa11.15□□□□□ -0.62
SF1-207ENST00000413951 SDHAF1A6NFY7 115 aa11.15□□□□□ -0.62
SF1-207ENST00000413951 POLR2KP53803 58 aaKnown RBP11.15□□□□□ -0.62
SF1-207ENST00000413951 ELOBQ15370 118 aa11.15□□□□□ -0.62
SF1-207ENST00000413951 COX11Q9Y6N1 276 aa11.15□□□□□ -0.62
SF1-207ENST00000413951 D6R8Y8 96 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 PHOX2AO14813 284 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 IGHV3-30P01768 117 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 IGHV3-33P01772 117 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 IGHV3-30-3P0DP02 117 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 IGHV3-30-5P0DP03 117 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 CKS2P33552 79 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 COX19Q49B96 90 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 GNB1LQ9BYB4 327 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 ST20Q9HBF5 79 aa11.14□□□□□ -0.63
SF1-207ENST00000413951 TRBV27A0A0K0K1C4 114 aa11.13□□□□□ -0.63
SF1-207ENST00000413951 SMR3BP02814 79 aaPredicted RBP11.13□□□□□ -0.63
SF1-207ENST00000413951 RPL32P62910 135 aaKnown RBP11.13□□□□□ -0.63
SF1-207ENST00000413951 IQCJQ1A5X6 159 aa11.13□□□□□ -0.63
SF1-207ENST00000413951 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
SF1-207ENST00000413951 HLA-DQA1P01909 254 aa11.12□□□□□ -0.63
SF1-207ENST00000413951 SUMO2P61956 95 aaKnown RBP11.12□□□□□ -0.63
SF1-207ENST00000413951 ORMDL3Q8N138 153 aa11.12□□□□□ -0.63
SF1-207ENST00000413951 RMI2Q96E14 147 aa11.12□□□□□ -0.63
SF1-207ENST00000413951 TGIF2-C20orf24A0A0A6YYL0 155 aa11.11□□□□□ -0.63
SF1-207ENST00000413951 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
SF1-207ENST00000413951 MT-ND6P03923 174 aa11.11□□□□□ -0.63
SF1-207ENST00000413951 COTL1Q14019 142 aa11.11□□□□□ -0.63
SF1-207ENST00000413951 NIT1Q86X76 327 aa11.11□□□□□ -0.63
SF1-207ENST00000413951 LAMTOR2Q9Y2Q5 125 aa11.11□□□□□ -0.63
SF1-207ENST00000413951 FAT1Q14517 4588 aa11.11□□□□□ -0.63
SF1-207ENST00000413951 TRBV25-1A0A075B6N4 114 aa11.1□□□□□ -0.63
SF1-207ENST00000413951 IGHV1-24A0A0C4DH33 117 aa11.1□□□□□ -0.63
SF1-207ENST00000413951 I3L3M4 83 aa11.1□□□□□ -0.63
SF1-207ENST00000413951 NPYP01303 97 aa11.1□□□□□ -0.63
SF1-207ENST00000413951 CBLN2Q8IUK8 224 aa11.1□□□□□ -0.63
SF1-207ENST00000413951 PRELID3AQ96N28 172 aa11.1□□□□□ -0.63
SF1-207ENST00000413951 CHCHD7Q9BUK0 85 aa11.1□□□□□ -0.63
SF1-207ENST00000413951 SMCO4Q9NRQ5 59 aa11.1□□□□□ -0.63
SF1-207ENST00000413951 DMBT1Q9UGM3 2413 aaPredicted RBP11.09□□□□□ -0.63
SF1-207ENST00000413951 TSHBP01222 138 aa11.09□□□□□ -0.63
SF1-207ENST00000413951 PLA2G1BP04054 148 aaKnown RBP11.09□□□□□ -0.63
SF1-207ENST00000413951 PRSS47A8MTI9 375 aa11.08□□□□□ -0.64
SF1-207ENST00000413951 VCYO14598 125 aa11.08□□□□□ -0.64
SF1-207ENST00000413951 APCSP02743 223 aa11.08□□□□□ -0.64
SF1-207ENST00000413951 Q8N3U1 123 aa11.08□□□□□ -0.64
SF1-207ENST00000413951 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.64
SF1-207ENST00000413951 PMCHP20382 165 aa11.07□□□□□ -0.64
SF1-207ENST00000413951 PKIAP61925 76 aa11.07□□□□□ -0.64
SF1-207ENST00000413951 TMEM243Q9BU79 118 aa11.07□□□□□ -0.64
SF1-207ENST00000413951 HERC1Q15751 4861 aa11.07□□□□□ -0.64
SF1-207ENST00000413951 ESDP10768 282 aa11.06□□□□□ -0.64
SF1-207ENST00000413951 AMTP48728 403 aa11.06□□□□□ -0.64
SF1-207ENST00000413951 CHCHD5Q9BSY4 110 aa11.06□□□□□ -0.64
SF1-207ENST00000413951 Q8N976 141 aa11.05□□□□□ -0.64
SF1-207ENST00000413951 DEFB104AQ8WTQ1 72 aa11.05□□□□□ -0.64
SF1-207ENST00000413951 MRPL18Q9H0U6 180 aaKnown RBP11.05□□□□□ -0.64
SF1-207ENST00000413951 H7C423 109 aa11.04□□□□□ -0.64
SF1-207ENST00000413951 J3QL48 77 aa11.04□□□□□ -0.64
SF1-207ENST00000413951 KIAA1644Q3SXP7 199 aa11.04□□□□□ -0.64
SF1-207ENST00000413951 MPV17L2Q567V2 206 aa11.04□□□□□ -0.64
SF1-207ENST00000413951 KIR2DL4Q99706 377 aa11.04□□□□□ -0.64
SF1-207ENST00000413951 A0A087WX48 190 aa11.03□□□□□ -0.64
SF1-207ENST00000413951 A0A1B0GUV1 79 aa11.03□□□□□ -0.64
SF1-207ENST00000413951 TCAPO15273 167 aa11.03□□□□□ -0.64
SF1-207ENST00000413951 HAMPP81172 84 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 472.2 ms