RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 BVES-AS1Q5T3Y7 98 aa5.41□□□□□ -1.54
CXCR4-202ENST00000409817 C20orf203Q8NBC4 194 aa5.41□□□□□ -1.54
CXCR4-202ENST00000409817 C16orf74Q96GX8 76 aa5.41□□□□□ -1.54
CXCR4-202ENST00000409817 KRTAP10-3P60369 221 aa5.41□□□□□ -1.54
CXCR4-202ENST00000409817 HSD52Q0P140 79 aa5.41□□□□□ -1.54
CXCR4-202ENST00000409817 C9orf66Q5T8R8 295 aa5.41□□□□□ -1.54
CXCR4-202ENST00000409817 NEGR1Q7Z3B1 354 aa5.41□□□□□ -1.54
CXCR4-202ENST00000409817 ZMAT5Q9UDW3 170 aaKnown RBP5.41□□□□□ -1.54
CXCR4-202ENST00000409817 PYGO1Q9Y3Y4 419 aa5.41□□□□□ -1.54
CXCR4-202ENST00000409817 TRAV4A0A0B4J268 109 aa5.4□□□□□ -1.55
CXCR4-202ENST00000409817 TRBV10-1A0A0K0K1A3 114 aa5.4□□□□□ -1.55
CXCR4-202ENST00000409817 AZU1P20160 251 aa5.4□□□□□ -1.55
CXCR4-202ENST00000409817 GTSCR1Q86UQ5 136 aa5.4□□□□□ -1.55
CXCR4-202ENST00000409817 CST9LQ9H4G1 147 aa5.4□□□□□ -1.55
CXCR4-202ENST00000409817 MRPL16Q9NX20 251 aaKnown RBP5.4□□□□□ -1.55
CXCR4-202ENST00000409817 GCN1Q92616 2671 aaKnown RBP5.39□□□□□ -1.55
CXCR4-202ENST00000409817 E9PLD3 99 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 GIG44P09565 113 aaPredicted RBP5.39□□□□□ -1.55
CXCR4-202ENST00000409817 P0DMU3 169 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 FAM231AP0DMU4 169 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 FAM231CP0DMU5 169 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 HERVK_113P61574 105 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 GAGE1Q13065 139 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 DGAT2L7PQ6IED9 249 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 PCP2Q8IVA1 136 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 OR4C5Q8NGB2 326 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 OR11H2Q8NH07 326 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 AKAP9Q99996 3911 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 HECTD1Q9ULT8 2610 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 NOTCH2Q04721 2471 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 IGHV3OR16-12A0A075B7B8 117 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 IGKV2D-26A0A0A0MRZ7 120 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 TRGV1A0A0A0MS02 117 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 A6NDN8 102 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 RPL39P62891 51 aaKnown RBP5.39□□□□□ -1.55
CXCR4-202ENST00000409817 RRN3P1Q2M238 152 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 CSNK1G2-AS1Q8NCQ2 148 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 ORAOV1Q8WV07 137 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 OVOL2Q9BRP0 275 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 SPANXA1Q9NS26 97 aa5.39□□□□□ -1.55
CXCR4-202ENST00000409817 NACAE9PAV3 2078 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 IGHV3-73A0A0B4J1V6 119 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 C11orf86A6NJI1 115 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 PRM2P04554 102 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 COTL1Q14019 142 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 TAL2Q16559 108 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 NFE4Q86UQ8 179 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 LINC00469Q8N7U9 141 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 CITED1Q99966 193 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 TP73-AS1Q9UF72 201 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 COX11Q9Y6N1 276 aa5.38□□□□□ -1.55
CXCR4-202ENST00000409817 IGLV4-69A0A075B6H9 119 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 TRBV25-1A0A075B6N4 114 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 ZNF25P17030 456 aaPredicted RBP5.37□□□□□ -1.55
CXCR4-202ENST00000409817 RPL35AP18077 110 aaKnown RBP5.37□□□□□ -1.55
CXCR4-202ENST00000409817 RPL36AP83881 106 aaKnown RBP5.37□□□□□ -1.55
CXCR4-202ENST00000409817 SMAGPQ0VAQ4 97 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 RPL36ALQ969Q0 106 aaKnown RBP5.37□□□□□ -1.55
CXCR4-202ENST00000409817 VCX2Q9H322 139 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 IGLV4-3A0A075B6K6 122 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 TRBV7-3A0A075B6L6 115 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 SMIM9A6NGZ8 99 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 K7EQD1 137 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 DAZ4Q86SG3 579 aaKnown RBP5.37□□□□□ -1.55
CXCR4-202ENST00000409817 CHAC1Q9BUX1 264 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 TIMM21Q9BVV7 248 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 WFDC10AQ9H1F0 79 aa5.37□□□□□ -1.55
CXCR4-202ENST00000409817 DAZ3Q9NR90 486 aaKnown RBP5.37□□□□□ -1.55
CXCR4-202ENST00000409817 C2CD3Q4AC94 2353 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 TRAV8-6A0A0B4J262 113 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 MYMXA0A1B0GTQ4 84 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 PLAC8L1A1L4L8 177 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 TCTAP57738 103 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 Q6ZTI0 123 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 KIR2DL5BQ8NHK3 375 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 AMELXQ99217 191 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 PRADC1Q9BSG0 188 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
CXCR4-202ENST00000409817 NOP10Q9NPE3 64 aaKnown RBP5.36□□□□□ -1.55
CXCR4-202ENST00000409817 SETD2Q9BYW2 2564 aaPredicted RBP5.35□□□□□ -1.55
CXCR4-202ENST00000409817 FN1P02751 2386 aaKnown RBP5.35□□□□□ -1.55
CXCR4-202ENST00000409817 TRBV6-4A0A1B0GX49 114 aa5.35□□□□□ -1.55
CXCR4-202ENST00000409817 TAX1BP3O14907 124 aa5.35□□□□□ -1.55
CXCR4-202ENST00000409817 MRPS36P82909 103 aaKnown RBP5.35□□□□□ -1.55
CXCR4-202ENST00000409817 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.35□□□□□ -1.55
CXCR4-202ENST00000409817 WFDC9Q8NEX5 89 aa5.35□□□□□ -1.55
CXCR4-202ENST00000409817 ZNF479Q96JC4 524 aa5.35□□□□□ -1.55
CXCR4-202ENST00000409817 CHCHD7Q9BUK0 85 aa5.35□□□□□ -1.55
CXCR4-202ENST00000409817 TM2D2Q9BX73 214 aa5.35□□□□□ -1.55
CXCR4-202ENST00000409817 NF1P21359 2839 aa5.35□□□□□ -1.55
CXCR4-202ENST00000409817 TRGV2A0A075B6R0 118 aa5.34□□□□□ -1.55
CXCR4-202ENST00000409817 H3BRM9 83 aa5.34□□□□□ -1.55
CXCR4-202ENST00000409817 TMEM170BQ5T4T1 132 aa5.34□□□□□ -1.55
CXCR4-202ENST00000409817 UBE2D4Q9Y2X8 147 aa5.34□□□□□ -1.55
CXCR4-202ENST00000409817 SETXQ7Z333 2677 aaKnown RBP5.34□□□□□ -1.55
CXCR4-202ENST00000409817 APOC4P55056 127 aa5.34□□□□□ -1.55
CXCR4-202ENST00000409817 UBE2D3P61077 147 aa5.34□□□□□ -1.55
CXCR4-202ENST00000409817 UBE2D2P62837 147 aa5.34□□□□□ -1.55
CXCR4-202ENST00000409817 MAPKAPK5-AS1Q8N8E1 139 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms