RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PET117Q6UWS5 81 aa8.36□□□□□ -1.07
SNX13-202ENST00000409604 FSHBP01225 129 aa8.36□□□□□ -1.07
SNX13-202ENST00000409604 RNASE3P12724 160 aaKnown RBP8.36□□□□□ -1.07
SNX13-202ENST00000409604 CRIP2P52943 208 aaPredicted RBP8.36□□□□□ -1.07
SNX13-202ENST00000409604 NHP2Q9NX24 153 aaKnown RBP8.36□□□□□ -1.07
SNX13-202ENST00000409604 A0A0J9YWU9 116 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 Q0VG73 95 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 TRBV7-3A0A075B6L6 115 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 SS18Q15532 418 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 C16orf95Q9H693 158 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 M0R2N4 97 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 RNF151Q2KHN1 245 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 CYSRT1A8MQ03 144 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 MRPL23Q16540 153 aaKnown RBP8.35□□□□□ -1.07
SNX13-202ENST00000409604 TDRG1Q3Y452 100 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 SLC25A29Q8N8R3 303 aa8.35□□□□□ -1.07
SNX13-202ENST00000409604 CSMD1Q96PZ7 3565 aa8.34□□□□□ -1.07
SNX13-202ENST00000409604 CTRLP40313 264 aa8.34□□□□□ -1.07
SNX13-202ENST00000409604 ZFP2Q6ZN57 461 aa8.34□□□□□ -1.07
SNX13-202ENST00000409604 CSMD2Q7Z408 3487 aa8.34□□□□□ -1.07
SNX13-202ENST00000409604 TIMM21Q9BVV7 248 aa8.34□□□□□ -1.07
SNX13-202ENST00000409604 PRO0255Q9UI72 69 aa8.34□□□□□ -1.07
SNX13-202ENST00000409604 K7EMI3 77 aa8.33□□□□□ -1.08
SNX13-202ENST00000409604 RPL24P83731 157 aaKnown RBP8.33□□□□□ -1.08
SNX13-202ENST00000409604 RBMY1BA6NDE4 496 aaKnown RBP8.33□□□□□ -1.08
SNX13-202ENST00000409604 RBMY1EA6NEQ0 496 aaKnown RBP8.33□□□□□ -1.08
SNX13-202ENST00000409604 LINC00587B1AMM8 73 aa8.33□□□□□ -1.08
SNX13-202ENST00000409604 RBMY1DP0C7P1 496 aaKnown RBP8.33□□□□□ -1.08
SNX13-202ENST00000409604 IGLC6P0CF74 106 aa8.33□□□□□ -1.08
SNX13-202ENST00000409604 CCL18P55774 89 aa8.33□□□□□ -1.08
SNX13-202ENST00000409604 ICOSQ9Y6W8 199 aa8.33□□□□□ -1.08
SNX13-202ENST00000409604 CR1P17927 2039 aa8.33□□□□□ -1.08
SNX13-202ENST00000409604 FGF6P10767 208 aa8.33□□□□□ -1.08
SNX13-202ENST00000409604 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
SNX13-202ENST00000409604 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
SNX13-202ENST00000409604 PMVKQ15126 192 aa8.32□□□□□ -1.08
SNX13-202ENST00000409604 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
SNX13-202ENST00000409604 LECT2O14960 151 aa8.32□□□□□ -1.08
SNX13-202ENST00000409604 ZNF664Q8N3J9 261 aa8.31□□□□□ -1.08
SNX13-202ENST00000409604 RASL10AQ92737 203 aa8.31□□□□□ -1.08
SNX13-202ENST00000409604 LAMTOR2Q9Y2Q5 125 aa8.31□□□□□ -1.08
SNX13-202ENST00000409604 TRBV7-9A0A0J9YWB2 115 aa8.31□□□□□ -1.08
SNX13-202ENST00000409604 KLLNB2CW77 178 aa8.31□□□□□ -1.08
SNX13-202ENST00000409604 SPATA3Q8NHX4 192 aa8.31□□□□□ -1.08
SNX13-202ENST00000409604 CFAP126Q5VTH2 177 aa8.31□□□□□ -1.08
SNX13-202ENST00000409604 KRTAP10-3P60369 221 aa8.31□□□□□ -1.08
SNX13-202ENST00000409604 ZNF747Q9BV97 191 aa8.31□□□□□ -1.08
SNX13-202ENST00000409604 RNF152Q8N8N0 203 aa8.3□□□□□ -1.08
SNX13-202ENST00000409604 TMEM141Q96I45 108 aa8.3□□□□□ -1.08
SNX13-202ENST00000409604 C20orf78Q9BR46 151 aa8.3□□□□□ -1.08
SNX13-202ENST00000409604 Q8N2B8 174 aa8.3□□□□□ -1.08
SNX13-202ENST00000409604 LINC00526Q96FQ7 95 aa8.3□□□□□ -1.08
SNX13-202ENST00000409604 MPV17L2Q567V2 206 aa8.3□□□□□ -1.08
SNX13-202ENST00000409604 DAND5Q8N907 189 aa8.29□□□□□ -1.08
SNX13-202ENST00000409604 SPATA25Q9BR10 227 aa8.29□□□□□ -1.08
SNX13-202ENST00000409604 TP73-AS1Q9UF72 201 aa8.29□□□□□ -1.08
SNX13-202ENST00000409604 SOCS3O14543 225 aa8.29□□□□□ -1.08
SNX13-202ENST00000409604 SPENQ96T58 3664 aaKnown RBP8.29□□□□□ -1.08
SNX13-202ENST00000409604 Q6ZTC4 211 aa8.28□□□□□ -1.08
SNX13-202ENST00000409604 PCP2Q8IVA1 136 aa8.28□□□□□ -1.08
SNX13-202ENST00000409604 A0A1B0GXF2 115 aa8.28□□□□□ -1.08
SNX13-202ENST00000409604 RBMY1A1P0DJD3 496 aaKnown RBP8.28□□□□□ -1.08
SNX13-202ENST00000409604 RBMY1CP0DJD4 496 aa8.28□□□□□ -1.08
SNX13-202ENST00000409604 ESDP10768 282 aa8.28□□□□□ -1.08
SNX13-202ENST00000409604 RBMY1FQ15415 496 aaKnown RBP8.28□□□□□ -1.08
SNX13-202ENST00000409604 MDFIQ99750 246 aa8.28□□□□□ -1.08
SNX13-202ENST00000409604 C1orf43Q9BWL3 253 aa8.28□□□□□ -1.08
SNX13-202ENST00000409604 NBPF19A0A087WUL8 3843 aa8.28□□□□□ -1.08
SNX13-202ENST00000409604 LINC00269Q8N2A0 174 aa8.28□□□□□ -1.08
SNX13-202ENST00000409604 TRAV8-3A0A0A6YYJ7 113 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 PLNP26678 52 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 Q6ZUT4 128 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 CLUHP3Q96NS8 147 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 LINC00467Q9BRT7 94 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 TRAV4A0A0B4J268 109 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 COL5A1-AS1Q5SY13 56 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 A6NJY4 79 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 F8VRH5 84 aa8.27□□□□□ -1.09
SNX13-202ENST00000409604 H3BUT2 72 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 HIGD2BQ4VC39 106 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 NEXN-AS1Q8NBZ9 246 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 EDA2RQ9HAV5 297 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 SNCGO76070 127 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 CRYGDP07320 174 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 Q9UF83 564 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 GAGE2EQ4V326 116 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 GAGE2DQ9UEU5 116 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 NDUFA12Q9UI09 145 aa8.26□□□□□ -1.09
SNX13-202ENST00000409604 TRBV6-1A0A0K0K1D8 114 aa8.25□□□□□ -1.09
SNX13-202ENST00000409604 A0A1B0GV90 55 aa8.25□□□□□ -1.09
SNX13-202ENST00000409604 M0QY20 66 aa8.25□□□□□ -1.09
SNX13-202ENST00000409604 KPRPQ5T749 579 aaPredicted RBP8.25□□□□□ -1.09
SNX13-202ENST00000409604 CCL25O15444 150 aa8.25□□□□□ -1.09
SNX13-202ENST00000409604 MIFP14174 115 aa8.25□□□□□ -1.09
SNX13-202ENST00000409604 RNF185Q96GF1 192 aa8.25□□□□□ -1.09
SNX13-202ENST00000409604 NDUFAF3Q9BU61 184 aa8.25□□□□□ -1.09
SNX13-202ENST00000409604 S100A7L2Q5SY68 101 aa8.24□□□□□ -1.09
SNX13-202ENST00000409604 SEC11AP67812 179 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms