RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 ERG28Q9UKR5 140 aa13.47□□□□□ -0.25
EWSR1-207ENST00000406548 NACAE9PAV3 2078 aa13.47□□□□□ -0.25
EWSR1-207ENST00000406548 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.47□□□□□ -0.25
EWSR1-207ENST00000406548 PRM2P04554 102 aa13.46□□□□□ -0.25
EWSR1-207ENST00000406548 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.25
EWSR1-207ENST00000406548 FHL3Q13643 280 aa13.45□□□□□ -0.26
EWSR1-207ENST00000406548 RNASE13Q5GAN3 156 aaKnown RBP13.45□□□□□ -0.26
EWSR1-207ENST00000406548 ANKRD17O75179 2603 aaKnown RBP13.45□□□□□ -0.26
EWSR1-207ENST00000406548 ADARB2-AS1A8MUL3 147 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 H7C2G1 150 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 UTP20O75691 2785 aaKnown RBP13.44□□□□□ -0.26
EWSR1-207ENST00000406548 Q6ZSN1 163 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 TMEM61Q8N0U2 210 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 ANKRD29Q8N6D5 301 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 CHCHD7Q9BUK0 85 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 Q9UF83 564 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 TRAV8-3A0A0A6YYJ7 113 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 IGHV1-58A0A0C4DH39 117 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 LITAFQ99732 161 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 SPANXA1Q9NS26 97 aa13.44□□□□□ -0.26
EWSR1-207ENST00000406548 ZFYVE26Q68DK2 2539 aa13.43□□□□□ -0.26
EWSR1-207ENST00000406548 UBE2D4Q9Y2X8 147 aa13.43□□□□□ -0.26
EWSR1-207ENST00000406548 IGHV4-31P0DP07 118 aa13.43□□□□□ -0.26
EWSR1-207ENST00000406548 PEMTQ9UBM1 199 aa13.43□□□□□ -0.26
EWSR1-207ENST00000406548 ZANQ9Y493 2812 aa13.43□□□□□ -0.26
EWSR1-207ENST00000406548 USP9YO00507 2555 aaPredicted RBP13.42□□□□□ -0.26
EWSR1-207ENST00000406548 TINCRA0A1B0GVN0 87 aa13.42□□□□□ -0.26
EWSR1-207ENST00000406548 SLC25A20O43772 301 aa13.42□□□□□ -0.26
EWSR1-207ENST00000406548 Q1RN00 199 aa13.42□□□□□ -0.26
EWSR1-207ENST00000406548 MAP6D1Q9H9H5 199 aa13.42□□□□□ -0.26
EWSR1-207ENST00000406548 CREBBPQ92793 2442 aa13.42□□□□□ -0.26
EWSR1-207ENST00000406548 C9JAW5 83 aa13.41□□□□□ -0.26
EWSR1-207ENST00000406548 NDUFA12Q9UI09 145 aa13.41□□□□□ -0.26
EWSR1-207ENST00000406548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.4□□□□□ -0.26
EWSR1-207ENST00000406548 IGKV2-29A2NJV5 120 aaPredicted RBP13.4□□□□□ -0.26
EWSR1-207ENST00000406548 M0QXV9 152 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 Q8N2B8 174 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 C11orf72Q8NBR9 251 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 VSIG2Q96IQ7 327 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 LINC01587Q99440 93 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 PRRC2AP48634 2157 aaKnown RBP13.4□□□□□ -0.26
EWSR1-207ENST00000406548 ZNF462Q96JM2 2506 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 Q6ZUT4 128 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 LINC00467Q9BRT7 94 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 SPANXDQ9BXN6 97 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 SPANXCQ9NY87 97 aa13.4□□□□□ -0.26
EWSR1-207ENST00000406548 CR1P17927 2039 aa13.39□□□□□ -0.27
EWSR1-207ENST00000406548 A0A1B0GV72 72 aa13.39□□□□□ -0.27
EWSR1-207ENST00000406548 IGHV3-53P01767 116 aa13.39□□□□□ -0.27
EWSR1-207ENST00000406548 DYNLRB2Q8TF09 96 aa13.39□□□□□ -0.27
EWSR1-207ENST00000406548 C4orf3Q8WVX3 66 aa13.39□□□□□ -0.27
EWSR1-207ENST00000406548 DNAJC30Q96LL9 226 aa13.39□□□□□ -0.27
EWSR1-207ENST00000406548 INSP01308 110 aa13.38□□□□□ -0.27
EWSR1-207ENST00000406548 SPINK8P0C7L1 97 aa13.38□□□□□ -0.27
EWSR1-207ENST00000406548 ATXN8Q156A1 80 aa13.38□□□□□ -0.27
EWSR1-207ENST00000406548 ADAMTSL4-AS1Q5T5F5 129 aa13.38□□□□□ -0.27
EWSR1-207ENST00000406548 IGHV3-38A0A0C4DH36 116 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 MT-ATP8P03928 68 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 XGP55808 180 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 KHDC1LQ5JSQ8 128 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 MXRA5Q9NR99 2828 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 FBN2P35556 2912 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 CIDEAO60543 219 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 PRSS2P07478 247 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 MIAQ16674 131 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 BEAN1Q3B7T3 259 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 MYO18BQ8IUG5 2567 aa13.37□□□□□ -0.27
EWSR1-207ENST00000406548 TRBV30A0A0K0K1B3 111 aa13.36□□□□□ -0.27
EWSR1-207ENST00000406548 A8MZ25 164 aa13.36□□□□□ -0.27
EWSR1-207ENST00000406548 RS1O15537 224 aa13.36□□□□□ -0.27
EWSR1-207ENST00000406548 TRIAP1O43715 76 aa13.36□□□□□ -0.27
EWSR1-207ENST00000406548 GEMIN7Q9H840 131 aaKnown RBP13.36□□□□□ -0.27
EWSR1-207ENST00000406548 POLQO75417 2590 aa13.36□□□□□ -0.27
EWSR1-207ENST00000406548 LINC01620Q4KN68 170 aa13.35□□□□□ -0.27
EWSR1-207ENST00000406548 ZFAND6Q6FIF0 208 aa13.35□□□□□ -0.27
EWSR1-207ENST00000406548 DEFB114Q30KQ6 69 aa13.35□□□□□ -0.27
EWSR1-207ENST00000406548 EPG5Q9HCE0 2579 aa13.34□□□□□ -0.27
EWSR1-207ENST00000406548 CKS1BP61024 79 aa13.33□□□□□ -0.27
EWSR1-207ENST00000406548 UBR5O95071 2799 aaPredicted RBP13.33□□□□□ -0.28
EWSR1-207ENST00000406548 TMEM262E9PQX1 116 aa13.32□□□□□ -0.28
EWSR1-207ENST00000406548 ICOSQ9Y6W8 199 aa13.32□□□□□ -0.28
EWSR1-207ENST00000406548 NPC2P61916 151 aa13.32□□□□□ -0.28
EWSR1-207ENST00000406548 YAE1D1Q9NRH1 226 aa13.32□□□□□ -0.28
EWSR1-207ENST00000406548 CDKN2A-AS1Q9UH64 79 aa13.32□□□□□ -0.28
EWSR1-207ENST00000406548 IGLV5-45A0A087WSX0 123 aa13.31□□□□□ -0.28
EWSR1-207ENST00000406548 TIMM17BO60830 172 aa13.31□□□□□ -0.28
EWSR1-207ENST00000406548 TIRAPP58753 221 aa13.31□□□□□ -0.28
EWSR1-207ENST00000406548 LINC01600Q96MT4 127 aa13.31□□□□□ -0.28
EWSR1-207ENST00000406548 HIST2H2BDQ6DRA6 164 aa13.31□□□□□ -0.28
EWSR1-207ENST00000406548 NTN5Q8WTR8 489 aaPredicted RBP13.31□□□□□ -0.28
EWSR1-207ENST00000406548 TRBV10-2A0A0K0K1G8 114 aa13.3□□□□□ -0.28
EWSR1-207ENST00000406548 RNF183Q96D59 192 aa13.3□□□□□ -0.28
EWSR1-207ENST00000406548 XCL2Q9UBD3 114 aa13.3□□□□□ -0.28
EWSR1-207ENST00000406548 DGAT2L7PQ6IED9 249 aa13.29□□□□□ -0.28
EWSR1-207ENST00000406548 CLUHP3Q96NS8 147 aa13.29□□□□□ -0.28
EWSR1-207ENST00000406548 NDUFA1O15239 70 aa13.29□□□□□ -0.28
EWSR1-207ENST00000406548 KRTAP10-9P60411 292 aa13.29□□□□□ -0.28
EWSR1-207ENST00000406548 ODF3L2Q3SX64 289 aa13.29□□□□□ -0.28
EWSR1-207ENST00000406548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.28□□□□□ -0.28
EWSR1-207ENST00000406548 TMEM101Q96IK0 257 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms